Strain Fitness in Shewanella amazonensis SB2B around Sama_1345

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,635,745	-				+0.6
1,635,749	+				-0.8
1,635,811	-		Sama_1343	0.20	-0.6
1,635,847	-		Sama_1343	0.28	+1.2
1,635,894	+		Sama_1343	0.40	+0.3
1,635,926	-		Sama_1343	0.47	+1.0
1,636,167	+				-0.9
1,636,240	+				+0.1
1,636,248	+				-0.3
1,636,308	-		Sama_1344	0.18	+0.2
1,636,314	-		Sama_1344	0.19	-0.9
1,636,314	-		Sama_1344	0.19	-1.0
1,636,314	-		Sama_1344	0.19	+0.5
1,636,318	-		Sama_1344	0.20	+1.1
1,636,322	-		Sama_1344	0.21	+0.2
1,636,367	-		Sama_1344	0.33	+0.9
1,636,410	-		Sama_1344	0.44	+2.0
1,636,410	-		Sama_1344	0.44	+2.0
1,636,410	-		Sama_1344	0.44	-1.2
1,636,422	-		Sama_1344	0.47	+1.0
1,636,556	-		Sama_1344	0.81	-1.4
1,636,607	-				-0.5
1,636,633	+				-1.8
1,636,847	-		Sama_1345	0.25	+2.2
1,636,887	-		Sama_1345	0.34	+0.4
1,636,949	+		Sama_1345	0.47	+1.0
1,636,950	-		Sama_1345	0.47	+0.1
1,636,950	-		Sama_1345	0.47	-0.6
1,636,955	-		Sama_1345	0.48	-0.0
1,637,076	-		Sama_1345	0.73	-0.4
1,637,076	-		Sama_1345	0.73	+0.2
1,637,153	-		Sama_1345	0.89	+0.2
1,637,161	+				-1.0
1,637,179	+				+1.2
1,637,183	+				+0.6
1,637,377	+		Sama_1346	0.24	+0.2
1,637,382	-		Sama_1346	0.25	-0.1
1,637,383	+		Sama_1346	0.26	+0.1
1,637,384	-		Sama_1346	0.26	-0.5
1,637,384	-		Sama_1346	0.26	-0.9
1,637,427	+		Sama_1346	0.36	+1.1
1,637,784	+				-0.2
1,637,796	+				-0.8
1,637,803	-				+0.2
1,637,808	-				-0.5
1,637,815	+				-0.1
1,637,815	+				+0.6
1,637,815	+				+0.1
1,637,817	+				-1.4
1,637,818	-				+0.2
1,637,832	+				-0.0
1,637,924	-				+0.8
1,638,015	-		Sama_1347	0.23	-0.4
1,638,015	-		Sama_1347	0.23	-0.8
1,638,019	-		Sama_1347	0.24	-0.4
1,638,171	+		Sama_1347	0.58	-0.6
1,638,196	-		Sama_1347	0.63	+0.5
1,638,196	-		Sama_1347	0.63	+0.0