Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4114

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
4,295,419	+		Psest_4111	0.55	+0.9
4,295,419	+		Psest_4111	0.55	-1.0
4,295,419	+		Psest_4111	0.55	+0.7
4,295,419	+		Psest_4111	0.55	+0.0
4,295,419	+		Psest_4111	0.55	-0.8
4,295,419	+		Psest_4111	0.55	+1.6
4,295,419	+		Psest_4111	0.55	+1.7
4,295,419	+		Psest_4111	0.55	-0.7
4,295,420	-		Psest_4111	0.55	+0.6
4,295,420	-		Psest_4111	0.55	-0.7
4,295,420	-		Psest_4111	0.55	+1.6
4,295,420	-		Psest_4111	0.55	+0.8
4,295,422	+		Psest_4111	0.55	-1.8
4,295,423	-		Psest_4111	0.56	+0.7
4,295,554	+		Psest_4111	0.79	-1.7
4,295,606	-		Psest_4111	0.89	+0.2
4,295,606	-		Psest_4111	0.89	-0.4
4,295,636	+				+1.0
4,295,637	-				+0.2
4,295,637	-				-1.1
4,295,637	-				-0.5
4,295,667	+				+0.3
4,295,667	+				-0.6
4,295,667	+				+0.0
4,295,667	+				-1.3
4,295,667	+				+0.2
4,295,668	-				+0.8
4,295,668	-				+0.7
4,295,668	-				+1.3
4,296,003	-				+0.3
4,296,102	-				-1.5
4,296,104	-				-0.2
4,296,104	-				+0.6
4,296,104	-				-0.4
4,296,116	-				-0.3
4,296,116	-				+1.5
4,296,116	-				-0.2
4,296,116	-				+0.1
4,296,116	-				-0.7
4,296,116	-				-1.5
4,296,116	-				+0.5
4,296,116	-				+0.8
4,296,150	+				-1.4
4,296,264	-		Psest_4113	0.59	+1.9
4,296,264	-		Psest_4113	0.59	-0.2
4,296,290	+		Psest_4113	0.71	-1.2
4,296,290	+		Psest_4113	0.71	+0.6
4,296,290	+		Psest_4113	0.71	+0.1
4,296,290	+		Psest_4113	0.71	-0.6
4,296,290	+		Psest_4113	0.71	-0.4
4,296,290	+		Psest_4113	0.71	+0.7
4,296,290	+		Psest_4113	0.71	+0.0
4,296,290	+		Psest_4113	0.71	+0.0
4,296,290	+		Psest_4113	0.71	-0.2
4,296,290	+		Psest_4113	0.71	+0.0
4,296,290	+		Psest_4113	0.71	-0.4
4,296,290	+		Psest_4113	0.71	-1.2
4,296,290	+		Psest_4113	0.71	-0.6
4,296,290	+		Psest_4113	0.71	-1.0
4,296,291	-		Psest_4113	0.71	-0.2
4,296,291	-		Psest_4113	0.71	+0.3
4,296,291	-		Psest_4113	0.71	+0.3
4,296,291	-		Psest_4113	0.71	-1.5
4,296,291	-		Psest_4113	0.71	+0.3
4,296,291	-		Psest_4113	0.71	+1.0
4,296,291	-		Psest_4113	0.71	+0.5
4,296,291	-		Psest_4113	0.71	+1.3
4,296,320	-		Psest_4113	0.85	+1.3
4,296,391	+				-0.3
4,296,391	+				+0.3
4,296,391	+				+0.8
4,296,391	+				+1.3
4,296,391	+				+1.3
4,296,391	+				+0.8
4,296,391	+				+0.6
4,296,391	+				+1.0
4,296,391	+				+0.4
4,296,391	+				-2.2
4,296,391	+				+1.8
4,296,391	+				+1.0
4,296,391	+				+1.3
4,296,391	+				+0.8
4,296,391	+				+0.1
4,296,391	+				+0.6
4,296,392	-				-0.7
4,296,392	-				+0.3
4,296,392	-				-0.2
4,296,392	-				-0.0
4,296,392	-				+0.8
4,296,392	-				-0.1
4,296,392	-				-0.2
4,296,392	-				-0.2
4,296,392	-				-0.4
4,296,392	-				-0.1
4,296,392	-				+1.0
4,296,392	-				+0.9
4,296,411	-				-0.5
4,296,613	+		Psest_4114	0.65	-0.0
4,296,614	-		Psest_4114	0.65	-1.5
4,296,668	+		Psest_4114	0.81	-0.6
4,296,668	+		Psest_4114	0.81	-0.5
4,296,669	-		Psest_4114	0.82	-0.4
4,296,669	-		Psest_4114	0.82	-0.9
4,296,669	-		Psest_4114	0.82	+0.3
4,296,669	-		Psest_4114	0.82	-1.0
4,296,693	-		Psest_4114	0.89	-0.2
4,296,693	-		Psest_4114	0.89	-1.1
4,296,693	-		Psest_4114	0.89	-0.6
4,296,693	-		Psest_4114	0.89	-1.7
4,296,693	-		Psest_4114	0.89	-1.0
4,296,693	-		Psest_4114	0.89	-1.7
4,296,696	+		Psest_4114	0.90	+0.3
4,296,696	+		Psest_4114	0.90	+0.3
4,296,729	-				-0.9
4,296,961	-				-0.6
4,296,961	-				-2.1
4,296,961	-				-0.3
4,296,961	-				-2.1
4,297,002	+				-0.7
4,297,003	-				+0.3
4,297,003	-				+1.8
4,297,003	-				-0.9
4,297,089	-				-0.4
4,297,089	-				+0.0