Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4080

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
4,255,170	+				+1.2
4,255,171	-				-0.4
4,255,181	+				+0.4
4,255,182	-				+0.1
4,255,182	-				-0.3
4,255,260	+				+0.1
4,255,260	+				+1.2
4,255,261	-				-1.1
4,255,261	-				+0.3
4,255,261	-				+0.3
4,255,261	-				+0.6
4,255,292	+		Psest_4079	0.10	-0.7
4,255,292	+		Psest_4079	0.10	-0.5
4,255,292	+		Psest_4079	0.10	+0.2
4,255,293	-		Psest_4079	0.10	+0.7
4,255,306	-		Psest_4079	0.12	+1.9
4,255,405	+		Psest_4079	0.24	-0.2
4,255,430	+		Psest_4079	0.27	+1.1
4,255,430	+		Psest_4079	0.27	+0.6
4,255,431	-		Psest_4079	0.28	+0.6
4,255,431	-		Psest_4079	0.28	+0.9
4,255,466	+		Psest_4079	0.32	-0.8
4,255,467	-		Psest_4079	0.32	+0.5
4,255,467	-		Psest_4079	0.32	+0.3
4,255,859	+		Psest_4079	0.80	+0.3
4,255,879	+		Psest_4079	0.83	+0.0
4,255,879	+		Psest_4079	0.83	-2.0
4,255,880	-		Psest_4079	0.83	+0.2
4,255,880	-		Psest_4079	0.83	+0.8
4,255,973	+				+0.5
4,255,973	+				-0.2
4,255,973	+				-0.6
4,256,047	+				-0.3
4,256,119	+		Psest_4080	0.12	-0.8
4,256,119	+		Psest_4080	0.12	+0.9
4,256,119	+		Psest_4080	0.12	+0.3
4,256,120	-		Psest_4080	0.12	-0.1
4,256,149	+		Psest_4080	0.16	+1.1
4,256,149	+		Psest_4080	0.16	+1.5
4,256,149	+		Psest_4080	0.16	+0.7
4,256,150	-		Psest_4080	0.17	-0.3
4,256,150	-		Psest_4080	0.17	+0.6
4,256,582	+		Psest_4080	0.78	+2.0
4,256,582	+		Psest_4080	0.78	+1.6
4,256,648	-		Psest_4080	0.88	+1.0
4,256,648	-		Psest_4080	0.88	+0.1
4,256,750	-				-0.2
4,256,968	+		Psest_4081	0.22	-0.3
4,256,969	-		Psest_4081	0.22	+0.6
4,257,124	+		Psest_4081	0.39	+0.2
4,257,124	+		Psest_4081	0.39	-1.1
4,257,124	+		Psest_4081	0.39	+0.6
4,257,124	+		Psest_4081	0.39	-0.8
4,257,125	-		Psest_4081	0.39	+1.3
4,257,125	-		Psest_4081	0.39	-1.1
4,257,125	-		Psest_4081	0.39	+1.1
4,257,125	-		Psest_4081	0.39	+0.1
4,257,181	+		Psest_4081	0.45	+0.1
4,257,181	+		Psest_4081	0.45	+0.2
4,257,181	+		Psest_4081	0.45	+0.0
4,257,182	-		Psest_4081	0.45	+0.3
4,257,215	-		Psest_4081	0.49	-1.8
4,257,610	+				-1.2
4,257,610	+				-1.4
4,257,611	-				+0.3
4,257,611	-				+0.4
4,257,611	-				+0.3