Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3971

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
4,138,592	+		Psest_3970	0.35	+0.7
4,138,592	+		Psest_3970	0.35	+0.1
4,138,593	-		Psest_3970	0.35	+0.2
4,138,593	-		Psest_3970	0.35	+0.4
4,138,593	-		Psest_3970	0.35	+2.3
4,138,593	-		Psest_3970	0.35	-1.0
4,138,593	-		Psest_3970	0.35	+1.9
4,138,593	-		Psest_3970	0.35	+1.3
4,138,764	+		Psest_3970	0.54	-0.3
4,138,764	+		Psest_3970	0.54	+1.9
4,138,764	+		Psest_3970	0.54	+1.2
4,138,765	-		Psest_3970	0.54	-0.2
4,138,765	-		Psest_3970	0.54	+0.0
4,138,765	-		Psest_3970	0.54	-0.3
4,138,765	-		Psest_3970	0.54	-0.2
4,138,765	-		Psest_3970	0.54	+0.6
4,138,943	+		Psest_3970	0.74	+0.6
4,138,943	+		Psest_3970	0.74	+1.3
4,138,944	-		Psest_3970	0.74	-0.7
4,138,944	-		Psest_3970	0.74	-1.0
4,138,944	-		Psest_3970	0.74	+0.3
4,138,944	-		Psest_3970	0.74	+1.1
4,138,959	-		Psest_3970	0.76	+0.2
4,139,028	-		Psest_3970	0.83	+0.7
4,139,211	-				-0.3
4,139,211	-				+2.1
4,139,215	-				-0.1
4,139,250	-				-0.1
4,139,305	-				+0.6
4,139,308	+				+1.5
4,139,308	+				+1.1
4,139,309	-				+0.3
4,139,309	-				+0.6
4,139,309	-				+1.4
4,139,309	-				+0.3
4,139,309	-				+0.9
4,139,309	-				+0.7
4,139,309	-				+0.1
4,139,309	-				+0.6
4,139,309	-				+0.5
4,139,309	-				-0.7
4,139,309	-				-1.2
4,139,309	-				-0.6
4,139,309	-				+0.9
4,139,309	-				+0.1
4,139,317	+				+0.3
4,139,317	+				+1.3
4,139,361	+				+1.3
4,139,361	+				+1.5
4,139,361	+				+0.7
4,139,362	-				-0.7
4,139,362	-				+0.4
4,139,362	-				-0.3
4,139,362	-				+0.3
4,139,362	-				+1.1
4,139,367	+				+2.9
4,139,368	-				+1.7
4,139,368	-				-0.1
4,139,368	-				-0.5
4,139,368	-				+1.7
4,139,368	-				+1.3
4,139,368	-				-0.7
4,139,588	-		Psest_3971	0.26	-0.3
4,139,588	-		Psest_3971	0.26	+0.4
4,139,588	-		Psest_3971	0.26	+1.3
4,139,699	-		Psest_3971	0.39	+1.0
4,139,699	-		Psest_3971	0.39	-0.2
4,139,770	+		Psest_3971	0.47	-0.0
4,139,770	+		Psest_3971	0.47	+1.3
4,139,770	+		Psest_3971	0.47	+1.0
4,139,770	+		Psest_3971	0.47	-0.7
4,139,771	-		Psest_3971	0.47	+1.9
4,139,771	-		Psest_3971	0.47	+0.6
4,139,771	-		Psest_3971	0.47	+0.3
4,139,771	-		Psest_3971	0.47	+0.5
4,139,771	-		Psest_3971	0.47	+0.3
4,139,771	-		Psest_3971	0.47	+3.3
4,139,771	-		Psest_3971	0.47	+0.4
4,139,771	-		Psest_3971	0.47	+0.3
4,139,771	-		Psest_3971	0.47	+0.5
4,140,083	+		Psest_3971	0.84	+1.7
4,140,083	+		Psest_3971	0.84	+1.6
4,140,084	-		Psest_3971	0.84	+0.3
4,140,136	-				+0.3
4,140,136	-				-1.3
4,140,215	-				+0.4
4,140,227	-				-0.1
4,140,725	-		Psest_3973	0.37	-0.6
4,140,956	-				-1.5
4,140,956	-				+0.5
4,140,956	-				-1.5