Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3886

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
4,055,310	+				-1.7
4,055,310	+				-0.3
4,055,311	-				+1.3
4,055,311	-				-0.5
4,055,977	+		Psest_3886	0.10	-0.3
4,055,977	+		Psest_3886	0.10	+0.3
4,055,977	+		Psest_3886	0.10	+0.3
4,055,977	+		Psest_3886	0.10	-0.3
4,055,977	+		Psest_3886	0.10	+1.3
4,055,977	+		Psest_3886	0.10	-0.1
4,055,977	+		Psest_3886	0.10	+0.3
4,055,977	+		Psest_3886	0.10	-0.3
4,055,977	+		Psest_3886	0.10	+2.3
4,055,977	+		Psest_3886	0.10	-2.1
4,055,977	+		Psest_3886	0.10	+0.3
4,055,977	+		Psest_3886	0.10	+1.3
4,055,977	+		Psest_3886	0.10	+0.3
4,055,977	+		Psest_3886	0.10	+1.3
4,055,977	+		Psest_3886	0.10	-1.1
4,055,977	+		Psest_3886	0.10	+2.6
4,055,978	-		Psest_3886	0.10	-0.3
4,055,978	-		Psest_3886	0.10	-0.3
4,055,978	-		Psest_3886	0.10	-0.3
4,055,978	-		Psest_3886	0.10	-0.4
4,055,978	-		Psest_3886	0.10	-0.6
4,055,978	-		Psest_3886	0.10	-1.3
4,055,978	-		Psest_3886	0.10	-0.7
4,055,978	-		Psest_3886	0.10	-0.7
4,055,978	-		Psest_3886	0.10	-0.6
4,055,978	-		Psest_3886	0.10	-1.7
4,055,978	-		Psest_3886	0.10	-0.4
4,055,978	-		Psest_3886	0.10	+0.2
4,055,978	-		Psest_3886	0.10	-0.7
4,055,978	-		Psest_3886	0.10	+1.3
4,055,978	-		Psest_3886	0.10	-2.1
4,055,978	-		Psest_3886	0.10	-1.1
4,055,978	-		Psest_3886	0.10	-0.3
4,055,978	-		Psest_3886	0.10	+0.7
4,055,978	-		Psest_3886	0.10	-1.6
4,055,978	-		Psest_3886	0.10	-0.6
4,055,978	-		Psest_3886	0.10	-0.2
4,055,978	-		Psest_3886	0.10	-0.7
4,055,978	-		Psest_3886	0.10	-1.1
4,055,978	-		Psest_3886	0.10	+0.3
4,055,978	-		Psest_3886	0.10	-0.9
4,055,978	-		Psest_3886	0.10	-2.0
4,055,979	+		Psest_3886	0.10	-0.3
4,055,979	+		Psest_3886	0.10	-0.3
4,055,979	+		Psest_3886	0.10	+1.3
4,055,979	+		Psest_3886	0.10	+1.3
4,055,979	+		Psest_3886	0.10	+1.3
4,055,979	+		Psest_3886	0.10	-0.3
4,055,980	-		Psest_3886	0.10	-0.6
4,055,980	-		Psest_3886	0.10	-0.1
4,055,980	-		Psest_3886	0.10	-0.6
4,056,356	-		Psest_3886	0.33	+0.3
4,056,474	+		Psest_3886	0.40	-0.3
4,056,474	+		Psest_3886	0.40	+2.3
4,056,475	-		Psest_3886	0.40	+0.3
4,056,516	+		Psest_3886	0.43	+0.7
4,056,517	-		Psest_3886	0.43	-0.3
4,056,658	+		Psest_3886	0.52	+0.7
4,056,658	+		Psest_3886	0.52	+0.3
4,056,658	+		Psest_3886	0.52	+1.3
4,056,659	-		Psest_3886	0.52	+0.3
4,056,659	-		Psest_3886	0.52	-0.1
4,056,659	-		Psest_3886	0.52	+1.8
4,056,659	-		Psest_3886	0.52	+2.3
4,056,659	-		Psest_3886	0.52	-0.3
4,056,659	-		Psest_3886	0.52	-1.7
4,056,871	-		Psest_3886	0.64	+1.3
4,056,871	-		Psest_3886	0.64	+1.3
4,057,006	+		Psest_3886	0.73	+0.8
4,057,006	+		Psest_3886	0.73	-0.2
4,057,006	+		Psest_3886	0.73	+1.3
4,057,006	+		Psest_3886	0.73	+1.3
4,057,007	-		Psest_3886	0.73	+0.7
4,057,007	-		Psest_3886	0.73	+1.3
4,057,007	-		Psest_3886	0.73	-0.1
4,057,007	-		Psest_3886	0.73	+1.3
4,057,061	-		Psest_3886	0.76	+0.8
4,057,457	+				+0.5
4,057,457	+				-0.2
4,057,668	+		Psest_3887	0.14	-0.5
4,057,669	-		Psest_3887	0.14	+0.3
4,057,906	-		Psest_3887	0.30	+0.3
4,058,001	+		Psest_3887	0.37	+1.3
4,058,001	+		Psest_3887	0.37	+0.7
4,058,001	+		Psest_3887	0.37	-1.9
4,058,001	+		Psest_3887	0.37	+0.3
4,058,002	-		Psest_3887	0.37	+0.3
4,058,002	-		Psest_3887	0.37	-1.5
4,058,002	-		Psest_3887	0.37	-0.7
4,058,002	-		Psest_3887	0.37	+1.8
4,058,158	-		Psest_3887	0.47	+1.3
4,058,399	-		Psest_3887	0.63	-0.3
4,058,446	+		Psest_3887	0.66	-2.1
4,058,446	+		Psest_3887	0.66	+0.0
4,058,446	+		Psest_3887	0.66	-0.7
4,058,446	+		Psest_3887	0.66	-1.3
4,058,446	+		Psest_3887	0.66	+0.3
4,058,447	-		Psest_3887	0.66	-0.1
4,058,447	-		Psest_3887	0.66	-0.3
4,058,448	+		Psest_3887	0.66	+1.7
4,058,449	-		Psest_3887	0.66	+0.3
4,058,449	-		Psest_3887	0.66	-0.0
4,058,449	-		Psest_3887	0.66	+0.7
4,058,457	+		Psest_3887	0.67	+0.3