Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3564

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,738,918	+		Psest_3563	0.28	+0.6
3,738,918	+		Psest_3563	0.28	+0.8
3,738,919	-		Psest_3563	0.28	-0.5
3,738,919	-		Psest_3563	0.28	+2.0
3,738,919	-		Psest_3563	0.28	+0.2
3,738,931	-		Psest_3563	0.29	-0.4
3,739,004	-		Psest_3563	0.35	+0.2
3,739,297	+		Psest_3563	0.58	+1.6
3,739,566	-		Psest_3563	0.79	+2.2
3,739,638	+		Psest_3563	0.85	+1.2
3,739,639	-		Psest_3563	0.85	-0.0
3,739,639	-		Psest_3563	0.85	+0.4
3,739,690	-		Psest_3563	0.89	+1.2
3,739,716	+				-0.5
3,739,716	+				+1.2
3,739,716	+				+2.8
3,739,716	+				-0.4
3,739,717	-				+0.3
3,739,965	+		Psest_3564	0.25	+0.2
3,739,965	+		Psest_3564	0.25	-0.2
3,739,965	+		Psest_3564	0.25	+0.6
3,739,966	-		Psest_3564	0.25	+0.8
3,740,088	-		Psest_3564	0.49	+0.2
3,740,089	+		Psest_3564	0.49	-0.5
3,740,148	-		Psest_3564	0.60	-0.0
3,740,235	+		Psest_3564	0.77	+0.6
3,740,237	+		Psest_3564	0.78	+0.5
3,740,237	+		Psest_3564	0.78	+0.6
3,740,238	-		Psest_3564	0.78	-0.4
3,740,238	-		Psest_3564	0.78	+1.2
3,740,238	-		Psest_3564	0.78	+0.0
3,740,238	-		Psest_3564	0.78	+1.4
3,740,330	+				-1.9
3,740,330	+				-0.9
3,740,331	-				+0.6
3,740,331	-				+0.2
3,740,331	-				+1.5
3,740,331	-				-0.7
3,740,349	-				-0.4
3,740,378	+				+1.2
3,740,379	-				+0.8
3,741,067	-		Psest_3565	0.61	+1.2
3,741,195	-		Psest_3565	0.73	+1.2
3,741,195	-		Psest_3565	0.73	+0.2