Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3561

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,736,340	+		Psest_3559	0.54	+0.6
3,736,340	+		Psest_3559	0.54	-0.4
3,736,341	-		Psest_3559	0.55	-1.4
3,736,538	+		Psest_3559	0.77	+1.2
3,736,574	+		Psest_3559	0.81	-0.4
3,736,574	+		Psest_3559	0.81	+0.2
3,736,575	-		Psest_3559	0.81	-1.1
3,736,575	-		Psest_3559	0.81	-1.0
3,736,575	-		Psest_3559	0.81	-0.1
3,736,575	-		Psest_3559	0.81	-1.0
3,736,625	+		Psest_3559	0.87	-0.1
3,736,625	+		Psest_3559	0.87	-0.3
3,736,625	+		Psest_3559	0.87	-2.2
3,736,625	+		Psest_3559	0.87	+2.2
3,736,625	+		Psest_3559	0.87	+0.8
3,736,625	+		Psest_3559	0.87	-0.4
3,736,626	-		Psest_3559	0.87	+1.2
3,736,626	-		Psest_3559	0.87	+0.2
3,736,626	-		Psest_3559	0.87	+1.6
3,736,626	-		Psest_3559	0.87	-0.4
3,736,626	-		Psest_3559	0.87	+1.4
3,736,704	-				-0.8
3,736,719	-				-1.9
3,736,730	+				-1.4
3,736,730	+				+0.6
3,736,730	+				+1.2
3,736,730	+				+0.3
3,736,730	+				+0.6
3,736,730	+				+0.8
3,736,730	+				+2.2
3,736,730	+				-1.8
3,736,730	+				-0.1
3,736,731	-				+1.6
3,736,731	-				+0.1
3,737,020	-		Psest_3560	0.74	+0.4
3,737,088	+				+0.7
3,737,090	+				+0.9
3,737,090	+				+1.7
3,737,090	+				+0.2
3,737,090	+				+0.8
3,737,091	-				+1.5
3,737,091	-				-0.5
3,737,091	-				-0.0
3,737,091	-				+0.0
3,737,091	-				-0.4
3,737,091	-				-1.4
3,737,091	-				+0.1
3,737,091	-				+0.2
3,737,091	-				-1.0
3,737,091	-				+0.2
3,737,091	-				+0.5
3,737,091	-				-0.2
3,737,091	-				+0.1
3,737,091	-				-0.7
3,737,229	+				+1.8
3,737,229	+				+0.6
3,737,229	+				+0.2
3,737,229	+				-0.4
3,737,229	+				+0.7
3,737,229	+				+0.6
3,737,229	+				+1.0
3,737,229	+				+0.2
3,737,229	+				+0.4
3,737,229	+				-0.8
3,737,229	+				+1.2
3,737,229	+				+0.6
3,737,229	+				+0.2
3,737,229	+				+1.0
3,737,229	+				+0.2
3,737,229	+				+0.6
3,737,229	+				-0.4
3,737,229	+				+0.4
3,737,229	+				+0.8
3,737,230	-				+0.0
3,737,230	-				+0.5
3,737,230	-				+0.1
3,737,230	-				+0.5
3,737,230	-				-0.4
3,737,230	-				-0.7
3,737,230	-				-1.1
3,737,230	-				-0.1
3,737,268	-				+0.5
3,737,620	+		Psest_3561	0.65	+0.2
3,737,620	+		Psest_3561	0.65	+2.8
3,737,620	+		Psest_3561	0.65	+0.1
3,737,620	+		Psest_3561	0.65	-0.4
3,737,620	+		Psest_3561	0.65	+2.2
3,737,620	+		Psest_3561	0.65	+0.2
3,737,620	+		Psest_3561	0.65	+0.2
3,737,620	+		Psest_3561	0.65	-2.5
3,737,620	+		Psest_3561	0.65	-1.8
3,737,621	-		Psest_3561	0.65	-0.8
3,737,621	-		Psest_3561	0.65	-0.1
3,737,621	-		Psest_3561	0.65	+0.7
3,737,621	-		Psest_3561	0.65	+1.5
3,737,621	-		Psest_3561	0.65	-0.2
3,737,621	-		Psest_3561	0.65	+1.2
3,737,621	-		Psest_3561	0.65	-0.4
3,737,657	-		Psest_3561	0.71	+2.0
3,737,675	+		Psest_3561	0.74	-1.1
3,737,675	+		Psest_3561	0.74	+0.6
3,737,766	+		Psest_3561	0.89	-0.1
3,737,766	+		Psest_3561	0.89	-1.1
3,737,766	+		Psest_3561	0.89	+1.9
3,737,766	+		Psest_3561	0.89	-0.5
3,737,767	-		Psest_3561	0.89	+1.2
3,737,767	-		Psest_3561	0.89	+0.4
3,737,866	+				+0.8
3,737,866	+				-0.1
3,737,866	+				+0.8
3,737,867	-				+0.6
3,737,867	-				+0.6
3,737,922	-				+0.2
3,738,115	-		Psest_3562	0.37	+1.5
3,738,115	-		Psest_3562	0.37	+1.2
3,738,115	-		Psest_3562	0.37	+1.3
3,738,567	+				+0.0
3,738,567	+				-0.1
3,738,567	+				+2.2
3,738,567	+				+0.7
3,738,567	+				+2.2
3,738,567	+				+0.2
3,738,567	+				+0.5
3,738,567	+				+1.2
3,738,567	+				+0.4
3,738,568	-				-0.4
3,738,568	-				+0.2
3,738,568	-				+0.2
3,738,568	-				-0.4
3,738,568	-				-1.9
3,738,568	-				-0.0
3,738,568	-				-0.4
3,738,568	-				-0.2
3,738,819	+		Psest_3563	0.20	+0.6
3,738,820	-		Psest_3563	0.20	-1.8