Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3394

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,561,364	-		Psest_3392	0.68	-1.6
3,561,394	+		Psest_3392	0.70	+0.0
3,561,486	-		Psest_3392	0.76	+0.5
3,561,634	+		Psest_3392	0.86	-1.2
3,561,634	+		Psest_3392	0.86	+0.3
3,561,635	-		Psest_3392	0.86	-1.3
3,561,809	+				+0.5
3,561,809	+				+0.6
3,561,809	+				-0.8
3,561,810	-				-0.1
3,561,810	-				-0.9
3,561,810	-				-0.5
3,561,810	-				+0.5
3,562,090	-		Psest_3393	0.62	-0.9
3,562,109	+		Psest_3393	0.68	-0.8
3,562,109	+		Psest_3393	0.68	-0.1
3,562,109	+		Psest_3393	0.68	-0.4
3,562,109	+		Psest_3393	0.68	+0.1
3,562,110	-		Psest_3393	0.68	-0.2
3,562,110	-		Psest_3393	0.68	-1.3
3,562,110	-		Psest_3393	0.68	+0.4
3,562,124	+		Psest_3393	0.73	-1.4
3,562,124	+		Psest_3393	0.73	-0.7
3,562,124	+		Psest_3393	0.73	-0.3
3,562,124	+		Psest_3393	0.73	-0.6
3,562,124	+		Psest_3393	0.73	-0.4
3,562,124	+		Psest_3393	0.73	+1.4
3,562,124	+		Psest_3393	0.73	+0.1
3,562,124	+		Psest_3393	0.73	-0.2
3,562,124	+		Psest_3393	0.73	+0.3
3,562,124	+		Psest_3393	0.73	-0.5
3,562,124	+		Psest_3393	0.73	+0.0
3,562,124	+		Psest_3393	0.73	+0.5
3,562,125	-		Psest_3393	0.73	+0.3
3,562,125	-		Psest_3393	0.73	+0.1
3,562,125	-		Psest_3393	0.73	+0.2
3,562,125	-		Psest_3393	0.73	-0.4
3,562,125	-		Psest_3393	0.73	-0.9
3,562,125	-		Psest_3393	0.73	+0.9
3,562,125	-		Psest_3393	0.73	+0.7
3,562,125	-		Psest_3393	0.73	+0.3
3,562,125	-		Psest_3393	0.73	+0.3
3,562,125	-		Psest_3393	0.73	+0.5
3,562,125	-		Psest_3393	0.73	-0.8
3,562,125	-		Psest_3393	0.73	+0.6
3,562,125	-		Psest_3393	0.73	+0.6
3,562,125	-		Psest_3393	0.73	-0.8
3,562,125	-		Psest_3393	0.73	-0.4
3,562,125	-		Psest_3393	0.73	+0.9
3,562,125	-		Psest_3393	0.73	+0.3
3,562,164	+		Psest_3393	0.86	-1.6
3,562,165	-		Psest_3393	0.86	+0.3
3,562,165	-		Psest_3393	0.86	+0.6
3,562,202	+				+0.6
3,562,202	+				-0.6
3,562,202	+				+0.3
3,562,202	+				+0.3
3,562,202	+				+0.1
3,562,202	+				-0.1
3,562,202	+				-0.0
3,562,202	+				+0.6
3,562,202	+				-0.1
3,562,202	+				-1.8
3,562,202	+				-1.0
3,562,202	+				+0.3
3,562,202	+				-0.3
3,562,202	+				+0.0
3,562,202	+				-0.3
3,562,202	+				+1.0
3,562,202	+				+0.4
3,562,203	-				+0.6
3,562,203	-				+0.4
3,562,203	-				+0.4
3,562,203	-				-0.5
3,562,203	-				-0.4
3,562,203	-				+0.4
3,562,203	-				+0.4
3,562,203	-				-0.8
3,562,203	-				-0.5
3,562,203	-				+0.2
3,562,203	-				-0.1
3,562,203	-				+0.9
3,562,203	-				+0.5
3,562,203	-				-0.4
3,562,203	-				+0.1
3,562,203	-				+0.3
3,562,203	-				+0.1
3,562,203	-				+0.5
3,562,203	-				-0.1
3,562,203	-				+0.7
3,562,287	+				-0.3
3,562,351	+				+0.4
3,562,351	+				-0.4
3,562,352	-				-0.2
3,562,352	-				-0.4
3,562,375	-		Psest_3394	0.10	-1.5
3,562,400	-		Psest_3394	0.15	+0.2
3,562,400	-		Psest_3394	0.15	+1.2
3,562,406	+		Psest_3394	0.16	+0.7
3,562,406	+		Psest_3394	0.16	+0.8
3,562,406	+		Psest_3394	0.16	+0.9
3,562,406	+		Psest_3394	0.16	+0.0
3,562,406	+		Psest_3394	0.16	+1.0
3,562,406	+		Psest_3394	0.16	+0.1
3,562,406	+		Psest_3394	0.16	-0.1
3,562,406	+		Psest_3394	0.16	+1.1
3,562,406	+		Psest_3394	0.16	+0.4
3,562,406	+		Psest_3394	0.16	-0.4
3,562,406	+		Psest_3394	0.16	+0.0
3,562,406	+		Psest_3394	0.16	+0.8
3,562,407	-		Psest_3394	0.17	+4.0
3,562,407	-		Psest_3394	0.17	+0.4
3,562,407	-		Psest_3394	0.17	+0.9
3,562,407	-		Psest_3394	0.17	+0.2
3,562,407	-		Psest_3394	0.17	+0.2
3,562,407	-		Psest_3394	0.17	+1.2
3,562,407	-		Psest_3394	0.17	+0.3
3,562,407	-		Psest_3394	0.17	-0.3
3,562,407	-		Psest_3394	0.17	+0.2
3,562,407	-		Psest_3394	0.17	+0.3
3,562,407	-		Psest_3394	0.17	+0.1
3,562,407	-		Psest_3394	0.17	-1.3
3,562,407	-		Psest_3394	0.17	+0.5
3,562,407	-		Psest_3394	0.17	+0.9
3,562,449	+		Psest_3394	0.25	-0.1
3,562,449	+		Psest_3394	0.25	+0.6
3,562,449	+		Psest_3394	0.25	+0.9
3,562,756	+		Psest_3394	0.88	+0.2
3,562,756	+		Psest_3394	0.88	-0.9
3,562,756	+		Psest_3394	0.88	+2.3
3,562,756	+		Psest_3394	0.88	+0.2
3,562,756	+		Psest_3394	0.88	+0.1
3,562,756	+		Psest_3394	0.88	-0.3
3,562,757	-		Psest_3394	0.88	+0.4
3,562,757	-		Psest_3394	0.88	-0.5
3,562,757	-		Psest_3394	0.88	+0.1
3,562,757	-		Psest_3394	0.88	-0.2
3,562,757	-		Psest_3394	0.88	+0.4
3,562,786	+				+0.0
3,562,786	+				+1.4
3,562,787	-				-0.7
3,562,787	-				+0.4
3,562,787	-				-0.4
3,562,787	-				+0.6
3,562,787	-				-1.8
3,562,850	+				-0.5
3,562,850	+				+0.5
3,562,851	-				+0.2
3,562,852	+				+0.9
3,562,852	+				-0.3
3,562,853	-				+0.6
3,562,853	-				-0.1
3,562,961	+				+0.5
3,563,242	+		Psest_3395	0.80	-0.9
3,563,243	-		Psest_3395	0.81	+0.2
3,563,355	+				+0.1
3,563,687	+				-2.6
3,563,694	+				+3.3
3,563,694	+				+1.0
3,563,694	+				-0.5
3,563,695	-				-0.6
3,563,695	-				-0.9