Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3043

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,225,135	+		Psest_3041	0.81	+1.3
3,225,135	+		Psest_3041	0.81	+0.4
3,225,145	-		Psest_3041	0.81	-0.4
3,225,250	-		Psest_3041	0.86	+1.1
3,225,354	+		Psest_3041	0.90	+0.3
3,225,354	+		Psest_3041	0.90	-0.0
3,225,354	+		Psest_3041	0.90	+0.1
3,225,354	+		Psest_3041	0.90	-0.2
3,225,354	+		Psest_3041	0.90	-0.8
3,225,354	+		Psest_3041	0.90	-0.9
3,225,355	-		Psest_3041	0.90	-1.4
3,225,355	-		Psest_3041	0.90	+0.4
3,225,355	-		Psest_3041	0.90	+0.1
3,225,355	-		Psest_3041	0.90	+0.2
3,225,355	-		Psest_3041	0.90	-0.2
3,225,355	-		Psest_3041	0.90	-0.1
3,225,568	-				-0.2
3,225,638	+				-1.0
3,225,946	+		Psest_3042	0.66	+0.7
3,225,994	+		Psest_3042	0.75	+0.3
3,226,319	+		Psest_3043	0.33	-1.4
3,226,319	+		Psest_3043	0.33	-1.2
3,226,319	+		Psest_3043	0.33	-0.0
3,226,319	+		Psest_3043	0.33	-1.1
3,226,319	+		Psest_3043	0.33	-1.5
3,226,319	+		Psest_3043	0.33	-1.0
3,226,319	+		Psest_3043	0.33	-0.2
3,226,319	+		Psest_3043	0.33	-0.4
3,226,319	+		Psest_3043	0.33	-1.1
3,226,320	-		Psest_3043	0.33	+0.5
3,226,320	-		Psest_3043	0.33	-0.3
3,226,320	-		Psest_3043	0.33	-1.1
3,226,320	-		Psest_3043	0.33	-0.3
3,226,320	-		Psest_3043	0.33	-0.6
3,226,346	+		Psest_3043	0.37	-2.8
3,226,346	+		Psest_3043	0.37	-1.3
3,226,347	-		Psest_3043	0.37	-0.4
3,226,392	+		Psest_3043	0.45	-0.7
3,226,392	+		Psest_3043	0.45	-1.0
3,226,729	+				-0.9
3,226,729	+				-0.8
3,226,730	-				-0.4
3,226,730	-				+1.0
3,226,730	-				+0.7
3,226,860	+				-0.4
3,226,861	-				-1.5
3,226,861	-				-1.3
3,226,881	+		Psest_3044	0.10	-0.1
3,226,944	+		Psest_3044	0.21	-0.2
3,226,944	+		Psest_3044	0.21	-1.4
3,226,944	+		Psest_3044	0.21	-0.2
3,226,944	+		Psest_3044	0.21	+0.3
3,226,945	-		Psest_3044	0.22	-1.4
3,226,945	-		Psest_3044	0.22	-1.1
3,226,945	-		Psest_3044	0.22	+0.4
3,226,945	-		Psest_3044	0.22	-2.2
3,226,945	-		Psest_3044	0.22	-1.3
3,226,945	-		Psest_3044	0.22	-3.9
3,226,945	-		Psest_3044	0.22	-1.3
3,227,049	+		Psest_3044	0.40	-1.0
3,227,050	-		Psest_3044	0.40	-1.2
3,227,050	-		Psest_3044	0.40	-2.8
3,227,050	-		Psest_3044	0.40	-0.3
3,227,100	+		Psest_3044	0.49	-0.6
3,227,100	+		Psest_3044	0.49	-0.5
3,227,101	-		Psest_3044	0.49	-0.8
3,227,257	-		Psest_3044	0.77	-0.9
3,227,262	+		Psest_3044	0.77	+0.3
3,227,405	+				-0.7
3,227,406	-				-0.4
3,227,439	-				+1.1
3,227,467	-				-0.5
3,227,532	+				-0.6
3,227,532	+				-0.5
3,227,533	-				+0.0
3,227,560	+				-0.6
3,227,560	+				+0.5
3,227,561	-				-0.7
3,227,566	+				-0.2
3,227,602	+				-0.4
3,227,602	+				-0.9
3,227,603	-				-1.2
3,227,603	-				-1.7
3,227,610	+				-0.5
3,227,611	-				-0.5
3,227,611	-				+0.7
3,227,626	+				-0.3
3,227,642	-				-0.4
3,227,688	-				+0.6