Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1102

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
1,197,031	+		Psest_1101	0.33	-1.0
1,197,032	-		Psest_1101	0.33	-0.7
1,197,034	+		Psest_1101	0.33	+0.6
1,197,076	+		Psest_1101	0.37	-0.4
1,197,076	+		Psest_1101	0.37	+1.1
1,197,077	-		Psest_1101	0.37	-0.1
1,197,114	+		Psest_1101	0.40	-0.1
1,197,168	+		Psest_1101	0.45	+1.3
1,197,168	+		Psest_1101	0.45	-0.3
1,197,169	-		Psest_1101	0.46	+1.2
1,197,169	-		Psest_1101	0.46	-0.8
1,197,238	+		Psest_1101	0.52	-0.4
1,197,379	+		Psest_1101	0.65	-0.0
1,197,380	-		Psest_1101	0.65	-0.4
1,197,460	-		Psest_1101	0.73	-0.3
1,197,643	+				+1.8
1,197,644	-				+0.5
1,197,664	+				-1.7
1,197,665	-				+0.2
1,197,724	+				+1.1
1,197,754	+				+0.5
1,197,785	-				+0.5
1,197,916	-				-0.1
1,197,971	+				+0.4
1,197,971	+				+0.9
1,197,971	+				+0.7
1,197,971	+				+0.3
1,197,972	-				+0.4
1,197,973	+				+0.2
1,197,974	-				-0.1
1,198,006	+				-2.7
1,198,006	+				+1.6
1,198,006	+				+0.7
1,198,007	-				+0.8
1,198,096	+				+0.5
1,198,096	+				-0.1
1,198,096	+				-1.1
1,198,096	+				+1.1
1,198,096	+				-0.2
1,198,246	+		Psest_1102	0.20	+0.7
1,198,246	+		Psest_1102	0.20	+0.1
1,198,246	+		Psest_1102	0.20	-0.0
1,198,247	-		Psest_1102	0.20	-0.6
1,198,247	-		Psest_1102	0.20	+0.2
1,198,247	-		Psest_1102	0.20	+1.2
1,198,250	+		Psest_1102	0.20	-0.3
1,198,251	-		Psest_1102	0.20	+0.8
1,198,251	-		Psest_1102	0.20	+1.1
1,198,300	+		Psest_1102	0.24	+2.6
1,198,346	+		Psest_1102	0.28	+0.3
1,198,602	+		Psest_1102	0.49	+0.3
1,198,603	-		Psest_1102	0.49	-0.4
1,198,603	-		Psest_1102	0.49	+0.4
1,198,798	+		Psest_1102	0.65	-0.3
1,198,798	+		Psest_1102	0.65	-0.7
1,198,798	+		Psest_1102	0.65	-0.2
1,198,798	+		Psest_1102	0.65	+0.1
1,198,798	+		Psest_1102	0.65	-0.2
1,198,798	+		Psest_1102	0.65	+0.5
1,198,798	+		Psest_1102	0.65	+0.1
1,198,798	+		Psest_1102	0.65	+0.1
1,198,798	+		Psest_1102	0.65	+0.1
1,198,798	+		Psest_1102	0.65	-0.0
1,198,798	+		Psest_1102	0.65	+0.1
1,198,798	+		Psest_1102	0.65	-0.1
1,198,798	+		Psest_1102	0.65	+1.2
1,198,799	-		Psest_1102	0.66	+0.4
1,198,799	-		Psest_1102	0.66	-0.4
1,198,799	-		Psest_1102	0.66	-1.0
1,198,799	-		Psest_1102	0.66	+0.6
1,198,799	-		Psest_1102	0.66	-0.4
1,198,799	-		Psest_1102	0.66	+0.9
1,198,799	-		Psest_1102	0.66	-0.4
1,198,799	-		Psest_1102	0.66	-0.1
1,198,867	+		Psest_1102	0.71	+1.6
1,198,867	+		Psest_1102	0.71	+0.6
1,198,868	-		Psest_1102	0.71	+0.5
1,198,868	-		Psest_1102	0.71	+0.7
1,198,944	+		Psest_1102	0.77	-0.6
1,199,012	+		Psest_1102	0.83	+1.6
1,199,031	+		Psest_1102	0.85	+0.1
1,199,031	+		Psest_1102	0.85	+0.1
1,199,031	+		Psest_1102	0.85	-2.1
1,199,031	+		Psest_1102	0.85	+1.4
1,199,031	+		Psest_1102	0.85	+2.6
1,199,032	-		Psest_1102	0.85	+0.1
1,199,032	-		Psest_1102	0.85	-0.7
1,199,084	-		Psest_1102	0.89	+0.1
1,199,203	-				-0.4
1,199,203	-				-0.8
1,199,242	+				+0.5
1,199,309	-				-0.1
1,199,309	-				+0.2
1,199,457	+				-0.3
1,199,457	+				-1.7
1,199,659	-		Psest_1103	0.23	-1.3
1,199,895	+		Psest_1103	0.44	-1.1
1,199,895	+		Psest_1103	0.44	+0.2
1,199,896	-		Psest_1103	0.44	-0.5
1,199,896	-		Psest_1103	0.44	-0.1
1,199,896	-		Psest_1103	0.44	-0.8
1,199,896	-		Psest_1103	0.44	-0.4