Strain Fitness in Shewanella oneidensis MR-1 around SO3062

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
3,177,238	-	topB	SO3061	0.71	+0.2
3,177,307	+	topB	SO3061	0.74	+0.3
3,177,307	+	topB	SO3061	0.74	-1.1
3,177,427	+	topB	SO3061	0.80	+0.8
3,177,557	+	topB	SO3061	0.86	+0.1
3,177,567	-	topB	SO3061	0.87	-0.1
3,177,735	-				-0.4
3,177,903	-				+0.2
3,177,969	-				+0.2
3,178,041	-				-0.2
3,178,151	+		SO3062	0.36	-0.5
3,178,159	-		SO3062	0.39	-1.2
3,178,247	+		SO3062	0.69	-0.3
3,178,388	+				+0.3
3,178,411	+				-0.5
3,178,500	+				-0.4
3,178,531	+				+0.1
3,178,660	-				+2.3
3,178,818	+		SO3063	0.13	+0.3
3,178,818	+		SO3063	0.13	-0.2
3,178,831	-		SO3063	0.14	-1.6
3,178,956	+		SO3063	0.22	+1.4
3,178,962	+		SO3063	0.22	-0.4
3,179,004	+		SO3063	0.25	+0.0
3,179,103	+		SO3063	0.32	+0.1
3,179,160	-		SO3063	0.36	+1.5
3,179,261	+		SO3063	0.42	-0.1