Strain Fitness in Shewanella oneidensis MR-1 around SO2762

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,883,666	+	purM	SO2760	0.86	+2.0
2,883,731	-				-1.4
2,883,962	-	purN	SO2761	0.22	+0.3
2,884,223	+	purN	SO2761	0.63	-0.6
2,884,357	-	purN	SO2761	0.84	-0.3
2,884,493	-				-0.4
2,884,583	+				-0.5
2,884,630	+				+0.2
2,884,630	+				+0.3
2,884,630	+				+0.5
2,884,630	+				-0.0
2,884,645	+				+0.6
2,884,746	+		SO2762	0.19	-0.5
2,884,810	-		SO2762	0.28	+0.5
2,884,890	-		SO2762	0.39	-0.8
2,884,957	+		SO2762	0.48	-0.7
2,885,340	-				+0.2
2,885,342	+				+0.3
2,885,343	+				+1.7
2,885,361	+				+0.6
2,885,424	-				-0.2
2,885,424	-				-0.2
2,885,430	+				-0.7
2,885,769	+		SO2763	0.13	-0.4
2,885,875	-		SO2763	0.26	-0.2
2,885,983	+		SO2763	0.39	+0.2
2,886,138	+		SO2763	0.58	-0.7
2,886,146	-		SO2763	0.59	-0.3
2,886,147	+		SO2763	0.59	+2.0
2,886,224	-		SO2763	0.69	-0.9
2,886,246	+		SO2763	0.71	+0.1
2,886,246	+		SO2763	0.71	+0.2
2,886,246	+		SO2763	0.71	-0.2
2,886,246	+		SO2763	0.71	-0.7
2,886,254	-		SO2763	0.72	+1.0
2,886,254	-		SO2763	0.72	+0.2
2,886,254	-		SO2763	0.72	+0.1
2,886,281	-		SO2763	0.75	-1.0
2,886,281	-		SO2763	0.75	-1.1