Strain Fitness in Shewanella oneidensis MR-1 around SO2674

Experiment: syringaldehyde 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 1 mM
2,799,467	-				+1.5
2,799,500	+				-0.8
2,799,563	-		SO2672	0.21	+0.8
2,799,611	+		SO2672	0.39	+0.6
2,799,662	+		SO2672	0.59	+0.0
2,799,662	+		SO2672	0.59	-0.8
2,799,670	-		SO2672	0.62	+1.8
2,799,670	-		SO2672	0.62	+0.7
2,799,670	-		SO2672	0.62	+1.4
2,799,670	-		SO2672	0.62	+0.6
2,799,670	-		SO2672	0.62	+0.3
2,799,670	-		SO2672	0.62	+1.4
2,799,797	+				+1.1
2,799,829	-		SO2673	0.12	+0.4
2,799,980	+		SO2673	0.37	+0.9
2,800,200	-		SO2673	0.73	+0.6
2,800,204	+		SO2673	0.74	-0.1
2,800,204	+		SO2673	0.74	+0.9
2,800,276	+		SO2673	0.86	-0.8
2,800,284	-		SO2673	0.87	+0.1
2,800,323	+				-1.0
2,800,372	+				+0.1
2,800,609	+		SO2675	0.11	-0.8
2,800,653	+		SO2675	0.25	+1.2
2,800,664	+		SO2675	0.29	-0.0
2,800,675	+		SO2675	0.33	-0.0
2,800,683	-		SO2675	0.35	+3.0
2,800,723	+		SO2675	0.49	+2.5
2,800,723	+		SO2675	0.49	+1.2
2,800,725	+		SO2675	0.49	+1.6
2,800,725	+		SO2675	0.49	+1.3
2,800,825	+		SO2675	0.82	+1.9
2,800,825	+		SO2675	0.82	+0.1
2,800,833	-		SO2675	0.85	-2.8
2,800,914	+				-0.1
2,800,922	-		SO2676	0.12	-0.1
2,801,118	+		SO2676	0.79	-0.8
2,801,136	+		SO2676	0.86	+0.0
2,801,136	+		SO2676	0.86	-0.2
2,801,144	-		SO2676	0.88	-0.1
2,801,144	-		SO2676	0.88	+0.0
2,801,171	+				+0.6
2,801,179	-				+0.1
2,801,432	+		SO2677	0.42	-0.4
2,801,432	+		SO2677	0.42	+0.8
2,801,472	-		SO2677	0.49	+0.7
2,801,501	+		SO2677	0.54	+0.4
2,801,526	-		SO2677	0.58	+0.1