Strain Fitness in Shewanella oneidensis MR-1 around SO2263
Experiment: syringaldehyde 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | syringaldehyde 1 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,378,046 | - | -1.9 | |||
| 2,378,168 | - | -0.2 | |||
| 2,378,172 | + | -0.3 | |||
| 2,378,316 | + | -0.6 | |||
| 2,378,657 | + | SO2263 | 0.53 | -1.8 | |
| 2,378,657 | + | SO2263 | 0.53 | +0.8 | |
| 2,378,657 | + | SO2263 | 0.53 | -0.2 | |
| 2,378,843 | + | -0.3 |
Or see this region's nucleotide sequence