Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014875

Experiment: PM with 4-Hydroxybenzoic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with 4-Hydroxybenzoic Acid (C)
3,246,962	+		TX73_014870	0.21	-0.4
3,246,980	+		TX73_014870	0.22	-0.7
3,246,980	+		TX73_014870	0.22	-0.4
3,246,983	+		TX73_014870	0.23	-1.8
3,246,983	+		TX73_014870	0.23	+0.5
3,246,983	+		TX73_014870	0.23	-0.1
3,246,983	+		TX73_014870	0.23	-0.7
3,246,988	-		TX73_014870	0.23	-1.0
3,246,991	-		TX73_014870	0.23	+0.2
3,247,002	-		TX73_014870	0.24	-0.9
3,247,012	+		TX73_014870	0.25	-0.1
3,247,015	-		TX73_014870	0.25	+0.2
3,247,015	-		TX73_014870	0.25	-0.3
3,247,020	-		TX73_014870	0.26	+0.8
3,247,034	+		TX73_014870	0.27	+0.7
3,247,045	+		TX73_014870	0.28	-0.8
3,247,052	+		TX73_014870	0.29	-0.2
3,247,060	-		TX73_014870	0.29	+0.1
3,247,065	-		TX73_014870	0.30	-0.1
3,247,070	-		TX73_014870	0.30	+0.5
3,247,087	+		TX73_014870	0.32	+0.7
3,247,087	+		TX73_014870	0.32	+0.9
3,247,087	+		TX73_014870	0.32	+0.4
3,247,087	+		TX73_014870	0.32	+0.3
3,247,087	+		TX73_014870	0.32	-1.2
3,247,087	+		TX73_014870	0.32	+0.9
3,247,087	+		TX73_014870	0.32	+0.3
3,247,087	-		TX73_014870	0.32	-0.5
3,247,149	+		TX73_014870	0.37	+0.7
3,247,165	-		TX73_014870	0.38	+1.1
3,247,176	-		TX73_014870	0.39	+0.7
3,247,212	+		TX73_014870	0.43	+0.9
3,247,222	+		TX73_014870	0.43	+1.2
3,247,229	+		TX73_014870	0.44	-0.3
3,247,230	-		TX73_014870	0.44	-0.1
3,247,238	+		TX73_014870	0.45	-0.4
3,247,240	+		TX73_014870	0.45	-0.4
3,247,263	-		TX73_014870	0.47	+0.2
3,247,270	-		TX73_014870	0.48	+0.3
3,247,292	-		TX73_014870	0.50	+0.2
3,247,292	-		TX73_014870	0.50	+0.3
3,247,310	+		TX73_014870	0.51	+0.5
3,247,338	+		TX73_014870	0.54	+0.3
3,247,343	+		TX73_014870	0.54	-1.1
3,247,343	+		TX73_014870	0.54	-0.6
3,247,343	+		TX73_014870	0.54	-0.1
3,247,346	-		TX73_014870	0.54	-0.0
3,247,351	-		TX73_014870	0.55	-0.0
3,247,353	-		TX73_014870	0.55	-0.8
3,247,370	-		TX73_014870	0.56	+0.5
3,247,377	+		TX73_014870	0.57	+0.1
3,247,385	+		TX73_014870	0.58	-0.8
3,247,394	-		TX73_014870	0.59	-0.1
3,247,396	+		TX73_014870	0.59	-1.5
3,247,396	+		TX73_014870	0.59	+0.4
3,247,404	-		TX73_014870	0.59	+0.2
3,247,410	-		TX73_014870	0.60	-0.2
3,247,417	+		TX73_014870	0.61	-1.3
3,247,417	+		TX73_014870	0.61	-0.4
3,247,425	-		TX73_014870	0.61	+1.0
3,247,431	-		TX73_014870	0.62	-1.1
3,247,433	+		TX73_014870	0.62	-0.1
3,247,436	+		TX73_014870	0.62	-1.8
3,247,447	+		TX73_014870	0.63	-0.3
3,247,447	+		TX73_014870	0.63	-0.2
3,247,461	+		TX73_014870	0.64	-2.0
3,247,466	+		TX73_014870	0.65	-0.3
3,247,490	+		TX73_014870	0.67	+0.1
3,247,490	+		TX73_014870	0.67	+0.5
3,247,490	+		TX73_014870	0.67	+1.2
3,247,490	+		TX73_014870	0.67	-0.3
3,247,490	+		TX73_014870	0.67	-0.4
3,247,498	-		TX73_014870	0.68	-0.7
3,247,498	-		TX73_014870	0.68	+0.2
3,247,498	-		TX73_014870	0.68	-0.3
3,247,498	-		TX73_014870	0.68	+0.7
3,247,498	-		TX73_014870	0.68	+0.1
3,247,498	-		TX73_014870	0.68	+0.8
3,247,500	+		TX73_014870	0.68	-0.1
3,247,500	-		TX73_014870	0.68	-1.0
3,247,508	-		TX73_014870	0.69	-0.4
3,247,508	-		TX73_014870	0.69	-0.6
3,247,511	-		TX73_014870	0.69	+0.4
3,247,532	-		TX73_014870	0.71	+0.5
3,247,532	-		TX73_014870	0.71	-0.2
3,247,532	-		TX73_014870	0.71	-0.1
3,247,540	-		TX73_014870	0.71	-0.5
3,247,543	+		TX73_014870	0.72	-1.3
3,247,585	+		TX73_014870	0.75	-0.3
3,247,585	+		TX73_014870	0.75	-2.7
3,247,587	+		TX73_014870	0.75	-1.0
3,247,588	-		TX73_014870	0.76	+0.5
3,247,593	-		TX73_014870	0.76	+0.6
3,247,615	+		TX73_014870	0.78	+0.5
3,247,615	+		TX73_014870	0.78	+0.3
3,247,624	+		TX73_014870	0.79	+0.1
3,247,632	+		TX73_014870	0.79	-0.0
3,247,683	-		TX73_014870	0.84	+0.0
3,247,693	+		TX73_014870	0.85	-0.8
3,247,715	+		TX73_014870	0.87	-0.7
3,247,730	-		TX73_014870	0.88	+0.3
3,247,754	-				+0.4
3,247,766	+				+0.3
3,247,774	-				+2.5
3,247,792	+				-0.1
3,247,800	-				+0.2
3,247,800	-				-1.5
3,247,800	-				+1.5
3,247,815	+				-0.7
3,247,823	-				+0.9
3,247,840	-				-0.1
3,247,862	+				+0.6
3,247,891	+				+0.8
3,247,891	+				-1.0
3,247,908	+				-1.5
3,247,953	-				+1.8
3,247,955	+				+0.0
3,247,963	-				+0.4
3,247,963	-				-0.1
3,247,963	-				+0.2
3,247,963	-				+0.2
3,247,997	-				+0.6
3,248,013	+				+0.4
3,248,022	+		TX73_014875	0.10	+0.5
3,248,022	+		TX73_014875	0.10	+2.3
3,248,022	+		TX73_014875	0.10	+0.2
3,248,022	+		TX73_014875	0.10	-0.7
3,248,022	+		TX73_014875	0.10	+0.3
3,248,022	+		TX73_014875	0.10	+0.2
3,248,022	+		TX73_014875	0.10	+0.6
3,248,022	+		TX73_014875	0.10	-0.3
3,248,022	+		TX73_014875	0.10	+0.4
3,248,022	+		TX73_014875	0.10	+0.3
3,248,022	+		TX73_014875	0.10	+0.3
3,248,030	-		TX73_014875	0.11	+1.1
3,248,030	-		TX73_014875	0.11	-1.0
3,248,030	-		TX73_014875	0.11	-1.0
3,248,030	-		TX73_014875	0.11	+1.7
3,248,030	-		TX73_014875	0.11	+3.2
3,248,030	-		TX73_014875	0.11	+0.6
3,248,035	-		TX73_014875	0.12	+0.4
3,248,046	+		TX73_014875	0.14	+0.0
3,248,054	-		TX73_014875	0.15	+1.8
3,248,064	-		TX73_014875	0.17	+0.2
3,248,064	-		TX73_014875	0.17	+0.4
3,248,092	-		TX73_014875	0.21	+0.9
3,248,123	+		TX73_014875	0.27	+1.0
3,248,140	-		TX73_014875	0.29	+1.3
3,248,143	+		TX73_014875	0.30	+1.5
3,248,145	-		TX73_014875	0.30	+0.3
3,248,145	-		TX73_014875	0.30	-1.2
3,248,151	-		TX73_014875	0.31	+0.8
3,248,151	-		TX73_014875	0.31	+0.6
3,248,151	-		TX73_014875	0.31	+0.8
3,248,199	+		TX73_014875	0.39	+0.2
3,248,199	+		TX73_014875	0.39	+0.4
3,248,205	-		TX73_014875	0.40	+0.8
3,248,205	-		TX73_014875	0.40	+1.0
3,248,205	-		TX73_014875	0.40	-0.2
3,248,207	-		TX73_014875	0.40	-0.2
3,248,207	-		TX73_014875	0.40	+0.6
3,248,210	-		TX73_014875	0.41	+1.1
3,248,238	+		TX73_014875	0.45	+1.0
3,248,246	-		TX73_014875	0.47	+0.3
3,248,277	+		TX73_014875	0.52	-1.0
3,248,283	-		TX73_014875	0.53	-0.0
3,248,309	-		TX73_014875	0.57	+0.9
3,248,376	-		TX73_014875	0.68	+0.9
3,248,388	-		TX73_014875	0.70	+0.3
3,248,400	+		TX73_014875	0.72	+0.3
3,248,401	-		TX73_014875	0.72	+0.5
3,248,406	-		TX73_014875	0.73	+0.5
3,248,421	+		TX73_014875	0.75	+0.1
3,248,459	+		TX73_014875	0.81	+1.8
3,248,459	+		TX73_014875	0.81	-0.8
3,248,462	-		TX73_014875	0.82	-0.8
3,248,496	+		TX73_014875	0.87	+0.1
3,248,546	+				+1.0
3,248,546	+				+1.1
3,248,551	+				-0.0
3,248,554	-				+0.0
3,248,569	-				-0.0
3,248,576	-				+0.3
3,248,654	+				-1.1
3,248,695	+				+1.2
3,248,703	-				-1.4
3,248,711	+				-0.5
3,248,729	+				-0.3
3,248,737	-				-0.4
3,248,799	-				-0.6
3,248,824	+		TX73_014880	0.12	-1.4
3,248,824	+		TX73_014880	0.12	+0.5
3,248,832	-		TX73_014880	0.13	+0.9
3,248,877	+		TX73_014880	0.19	+0.6
3,248,908	-		TX73_014880	0.23	+0.7
3,248,908	-		TX73_014880	0.23	+0.4
3,248,944	+		TX73_014880	0.27	+0.5
3,248,957	+		TX73_014880	0.29	+0.4
3,248,991	-		TX73_014880	0.33	+0.1
3,249,012	+		TX73_014880	0.36	+0.7
3,249,020	-		TX73_014880	0.37	-0.7
3,249,035	+		TX73_014880	0.38	+0.2
3,249,035	-		TX73_014880	0.38	-1.2
3,249,051	-		TX73_014880	0.40	+0.1
3,249,058	-		TX73_014880	0.41	-0.1
3,249,066	-		TX73_014880	0.42	-0.1
3,249,073	-		TX73_014880	0.43	+0.3
3,249,154	+		TX73_014880	0.53	-0.0
3,249,187	+		TX73_014880	0.57	-0.3
3,249,187	+		TX73_014880	0.57	-0.2
3,249,195	-		TX73_014880	0.58	+1.5
3,249,195	-		TX73_014880	0.58	+0.2
3,249,197	-		TX73_014880	0.59	-1.1
3,249,223	-		TX73_014880	0.62	-1.0
3,249,233	-		TX73_014880	0.63	+0.8
3,249,245	+		TX73_014880	0.65	+0.3
3,249,316	+		TX73_014880	0.73	+0.1
3,249,331	-		TX73_014880	0.75	-1.5
3,249,345	+		TX73_014880	0.77	-0.4
3,249,348	-		TX73_014880	0.77	+1.1
3,249,353	-		TX73_014880	0.78	+0.4
3,249,360	+		TX73_014880	0.79	+0.3
3,249,370	+		TX73_014880	0.80	+0.3
3,249,375	+		TX73_014880	0.81	+0.2
3,249,375	+		TX73_014880	0.81	-0.3
3,249,383	-		TX73_014880	0.82	-0.1
3,249,431	-		TX73_014880	0.88	-0.1
3,249,526	-				+1.1