Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024880

Experiment: PM with 4-Hydroxybenzoic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with 4-Hydroxybenzoic Acid (C)
5,401,845	+				-0.7
5,401,845	+				-0.8
5,401,872	-				-1.0
5,401,887	-				+1.1
5,401,890	-				+0.1
5,401,904	+				+0.3
5,401,936	-		TX73_024875	0.12	+0.0
5,401,936	-		TX73_024875	0.12	+0.0
5,401,953	+		TX73_024875	0.14	-0.3
5,401,968	+		TX73_024875	0.15	+0.1
5,401,976	-		TX73_024875	0.16	-0.3
5,401,984	+		TX73_024875	0.17	-0.6
5,401,992	-		TX73_024875	0.18	-0.1
5,402,002	-		TX73_024875	0.20	-0.0
5,402,005	-		TX73_024875	0.20	+0.4
5,402,049	-		TX73_024875	0.26	-0.5
5,402,056	+		TX73_024875	0.26	-0.1
5,402,064	-		TX73_024875	0.27	-0.6
5,402,069	+		TX73_024875	0.28	+0.3
5,402,075	-		TX73_024875	0.29	-0.5
5,402,079	-		TX73_024875	0.29	-0.3
5,402,095	-		TX73_024875	0.31	+0.8
5,402,096	-		TX73_024875	0.31	-0.2
5,402,112	-		TX73_024875	0.33	-0.4
5,402,118	-		TX73_024875	0.34	+0.6
5,402,172	-		TX73_024875	0.41	+0.6
5,402,185	-		TX73_024875	0.42	-0.1
5,402,188	+		TX73_024875	0.43	-0.5
5,402,189	-		TX73_024875	0.43	+0.4
5,402,194	+		TX73_024875	0.43	+0.0
5,402,202	+		TX73_024875	0.44	-0.6
5,402,202	+		TX73_024875	0.44	+0.5
5,402,210	-		TX73_024875	0.45	+1.2
5,402,226	-		TX73_024875	0.47	-0.1
5,402,281	+		TX73_024875	0.54	+0.1
5,402,307	-		TX73_024875	0.57	-1.4
5,402,322	+		TX73_024875	0.59	-0.3
5,402,333	+		TX73_024875	0.61	-0.2
5,402,336	-		TX73_024875	0.61	-0.3
5,402,336	-		TX73_024875	0.61	+0.2
5,402,344	+		TX73_024875	0.62	-0.3
5,402,346	+		TX73_024875	0.62	-0.0
5,402,361	+		TX73_024875	0.64	+0.7
5,402,369	-		TX73_024875	0.65	+0.2
5,402,372	+		TX73_024875	0.66	-0.4
5,402,378	-		TX73_024875	0.66	-0.8
5,402,392	-		TX73_024875	0.68	-0.3
5,402,392	-		TX73_024875	0.68	+0.5
5,402,392	-		TX73_024875	0.68	+0.1
5,402,394	+		TX73_024875	0.68	-0.5
5,402,449	-		TX73_024875	0.75	-0.3
5,402,472	+		TX73_024875	0.78	+0.2
5,402,480	-		TX73_024875	0.79	+0.9
5,402,490	-		TX73_024875	0.80	-0.1
5,402,490	-		TX73_024875	0.80	+0.1
5,402,498	-		TX73_024875	0.81	+0.5
5,402,508	+		TX73_024875	0.82	+0.5
5,402,516	+		TX73_024875	0.83	-0.1
5,402,526	-		TX73_024875	0.85	+1.6
5,402,526	-		TX73_024875	0.85	-0.6
5,402,527	-		TX73_024875	0.85	+0.6
5,402,531	-		TX73_024875	0.85	-0.4
5,402,531	-		TX73_024875	0.85	+1.6
5,402,531	-		TX73_024875	0.85	+1.1
5,402,539	+		TX73_024875	0.86	+0.4
5,402,542	-		TX73_024875	0.87	-0.9
5,402,544	+		TX73_024875	0.87	-1.3
5,402,547	-		TX73_024875	0.87	+0.7
5,402,573	-				+0.4
5,402,579	+				-0.1
5,402,584	+				+0.0
5,402,584	+				+0.1
5,402,592	-				+0.5
5,402,601	-				+0.8
5,402,616	-				+0.2
5,402,620	+				+1.1
5,402,621	-				+0.0
5,402,627	-				+0.9
5,402,644	+				-0.4
5,402,651	+				-0.0
5,402,652	-				+0.4
5,402,687	+				-0.4
5,402,694	+				+0.8
5,402,702	-				-0.3
5,402,720	-				+1.9
5,402,720	-				-0.6
5,402,724	-				-1.1
5,402,731	+				-0.7
5,402,731	+				-0.2
5,402,731	+				-0.0
5,402,731	+				-0.1
5,402,731	+				-1.3
5,402,731	+				-0.4
5,402,739	-				+0.0
5,402,739	-				+0.3
5,402,833	-				-0.4
5,402,835	+				-0.8
5,402,863	-				+0.2
5,402,879	+				+1.7
5,402,887	-				+1.5
5,402,887	-				+2.6
5,402,926	+		TX73_024880	0.11	+0.6
5,402,934	-		TX73_024880	0.12	+0.8
5,402,965	+		TX73_024880	0.15	+2.6
5,402,965	+		TX73_024880	0.15	+1.7
5,402,970	+		TX73_024880	0.16	+1.9
5,402,970	+		TX73_024880	0.16	+2.9
5,402,971	-		TX73_024880	0.16	+1.4
5,402,973	-		TX73_024880	0.16	+0.8
5,402,973	-		TX73_024880	0.16	+1.1
5,402,973	-		TX73_024880	0.16	+1.9
5,402,973	-		TX73_024880	0.16	+1.8
5,402,985	-		TX73_024880	0.17	+1.6
5,402,994	+		TX73_024880	0.18	+1.3
5,402,994	+		TX73_024880	0.18	+1.7
5,403,002	-		TX73_024880	0.19	+0.8
5,403,002	-		TX73_024880	0.19	+2.0
5,403,017	-		TX73_024880	0.21	+1.3
5,403,039	-		TX73_024880	0.23	+2.8
5,403,065	-		TX73_024880	0.26	+3.6
5,403,105	+		TX73_024880	0.30	+1.5
5,403,109	-		TX73_024880	0.30	+1.4
5,403,171	+		TX73_024880	0.37	+2.2
5,403,171	+		TX73_024880	0.37	+2.0
5,403,171	+		TX73_024880	0.37	+2.5
5,403,180	+		TX73_024880	0.37	+1.9
5,403,189	-		TX73_024880	0.38	+1.2
5,403,189	-		TX73_024880	0.38	+1.5
5,403,189	-		TX73_024880	0.38	+1.6
5,403,194	-		TX73_024880	0.39	+0.8
5,403,212	+		TX73_024880	0.41	+0.7
5,403,247	-		TX73_024880	0.44	+1.9
5,403,272	+		TX73_024880	0.47	+2.4
5,403,307	+		TX73_024880	0.50	+1.2
5,403,315	-		TX73_024880	0.51	+1.2
5,403,317	+		TX73_024880	0.51	+1.1
5,403,345	-		TX73_024880	0.54	+1.5
5,403,361	-		TX73_024880	0.56	+1.5
5,403,369	-		TX73_024880	0.57	+1.2
5,403,404	+		TX73_024880	0.60	+1.1
5,403,412	-		TX73_024880	0.61	+1.4
5,403,413	+		TX73_024880	0.61	+0.6
5,403,417	-		TX73_024880	0.62	+3.7
5,403,437	+		TX73_024880	0.64	+1.7
5,403,437	+		TX73_024880	0.64	+1.2
5,403,487	-		TX73_024880	0.69	+2.0
5,403,494	+		TX73_024880	0.70	+1.3
5,403,494	+		TX73_024880	0.70	+1.0
5,403,502	-		TX73_024880	0.70	+1.3
5,403,512	-		TX73_024880	0.71	+2.0
5,403,542	+		TX73_024880	0.75	+1.9
5,403,550	-		TX73_024880	0.75	+1.4
5,403,565	-		TX73_024880	0.77	+1.0
5,403,621	+		TX73_024880	0.83	+1.0
5,403,621	-		TX73_024880	0.83	+1.6
5,403,637	-		TX73_024880	0.84	+0.7
5,403,652	+		TX73_024880	0.86	+1.5
5,403,652	+		TX73_024880	0.86	+1.9
5,403,655	-		TX73_024880	0.86	+2.0
5,403,660	-		TX73_024880	0.87	+2.3
5,403,660	-		TX73_024880	0.87	+1.2
5,403,660	-		TX73_024880	0.87	+0.8
5,403,660	-		TX73_024880	0.87	+1.4
5,403,660	-		TX73_024880	0.87	+1.2
5,403,660	-		TX73_024880	0.87	+2.2
5,403,678	-		TX73_024880	0.89	+0.8
5,403,681	-		TX73_024880	0.89	+2.3
5,403,683	+		TX73_024880	0.89	+1.3
5,403,683	+		TX73_024880	0.89	+1.2
5,403,686	-		TX73_024880	0.89	+3.0
5,403,691	-		TX73_024880	0.90	+2.1
5,403,739	+				+1.8
5,403,761	+				+0.7
5,403,761	+				+0.3
5,403,771	+				+1.5
5,403,881	-				-2.7
5,403,894	+				+1.1
5,403,897	-				+0.6
5,403,898	+				+0.1
5,403,930	-		TX73_024885	0.10	-0.7
5,403,930	-		TX73_024885	0.10	-0.6
5,403,943	-		TX73_024885	0.11	-0.1
5,403,972	+		TX73_024885	0.13	+0.9
5,403,977	+		TX73_024885	0.14	+0.8
5,403,985	-		TX73_024885	0.14	-0.1
5,404,022	+		TX73_024885	0.17	-0.9
5,404,083	+		TX73_024885	0.22	-0.8
5,404,104	-		TX73_024885	0.23	-1.0
5,404,119	+		TX73_024885	0.24	-0.3
5,404,166	-		TX73_024885	0.28	+0.3
5,404,176	+		TX73_024885	0.29	-0.2
5,404,182	+		TX73_024885	0.29	-0.1
5,404,182	+		TX73_024885	0.29	-0.5
5,404,190	-		TX73_024885	0.30	+0.1
5,404,190	-		TX73_024885	0.30	-1.4
5,404,194	+		TX73_024885	0.30	-0.3
5,404,204	+		TX73_024885	0.31	-0.7
5,404,240	-		TX73_024885	0.33	+1.0
5,404,243	-		TX73_024885	0.34	+0.3
5,404,273	+		TX73_024885	0.36	-1.1
5,404,338	-		TX73_024885	0.41	-0.0
5,404,404	+		TX73_024885	0.46	-0.5
5,404,409	+		TX73_024885	0.46	+0.2
5,404,409	+		TX73_024885	0.46	+0.5
5,404,417	-		TX73_024885	0.47	-0.4
5,404,417	-		TX73_024885	0.47	-0.2
5,404,430	+		TX73_024885	0.48	-0.0
5,404,440	-		TX73_024885	0.48	-0.7
5,404,596	-		TX73_024885	0.60	-0.7
5,404,628	-		TX73_024885	0.63	-0.9
5,404,628	-		TX73_024885	0.63	+0.2
5,404,671	-		TX73_024885	0.66	+1.0
5,404,729	-		TX73_024885	0.70	-0.0