Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_005355

Experiment: PM with 4-Hydroxybenzoic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with 4-Hydroxybenzoic Acid (C)
1,144,899	-				-1.1
1,144,899	-				-2.9
1,144,933	-				-0.9
1,144,981	+				+1.5
1,144,985	+				+0.1
1,144,991	+				-1.1
1,144,991	+				-1.1
1,145,035	+				-0.7
1,145,037	+				-0.0
1,145,040	+				-1.0
1,145,042	+				+0.0
1,145,042	+				+0.7
1,145,047	-				-0.1
1,145,052	+				-0.1
1,145,060	-				-0.6
1,145,073	+				-0.7
1,145,081	-				-1.5
1,145,084	+				-2.6
1,145,110	-				+1.2
1,145,116	+				+1.0
1,145,122	-				+0.9
1,145,124	-				+0.0
1,145,150	-				+1.3
1,145,152	-				+0.4
1,145,163	+		TX73_005350	0.13	-0.5
1,145,163	+		TX73_005350	0.13	+0.3
1,145,171	-		TX73_005350	0.17	+0.4
1,145,171	-		TX73_005350	0.17	+0.4
1,145,171	-		TX73_005350	0.17	-0.8
1,145,176	-		TX73_005350	0.19	+1.9
1,145,176	-		TX73_005350	0.19	+0.6
1,145,236	-		TX73_005350	0.45	+0.7
1,145,249	-		TX73_005350	0.51	+0.5
1,145,259	-		TX73_005350	0.55	-0.0
1,145,265	-		TX73_005350	0.58	+0.7
1,145,265	-		TX73_005350	0.58	+0.7
1,145,292	+		TX73_005350	0.70	+0.5
1,145,422	-				-0.7
1,145,453	+		TX73_005355	0.13	-0.4
1,145,495	-		TX73_005355	0.18	-0.2
1,145,495	-		TX73_005355	0.18	-1.8
1,145,541	+		TX73_005355	0.24	-0.3
1,145,573	+		TX73_005355	0.28	-0.6
1,145,573	+		TX73_005355	0.28	-2.5
1,145,573	+		TX73_005355	0.28	-0.0
1,145,573	+		TX73_005355	0.28	-0.5
1,145,578	+		TX73_005355	0.29	+0.2
1,145,581	-		TX73_005355	0.29	+1.1
1,145,581	-		TX73_005355	0.29	-1.2
1,145,583	+		TX73_005355	0.29	-1.0
1,145,583	+		TX73_005355	0.29	-2.0
1,145,591	-		TX73_005355	0.31	-0.5
1,145,594	+		TX73_005355	0.31	-0.0
1,145,594	+		TX73_005355	0.31	-2.8
1,145,602	-		TX73_005355	0.32	-0.9
1,145,608	+		TX73_005355	0.33	-1.4
1,145,608	+		TX73_005355	0.33	-0.6
1,145,616	-		TX73_005355	0.34	-0.8
1,145,616	-		TX73_005355	0.34	-1.8
1,145,629	+		TX73_005355	0.35	-1.1
1,145,631	+		TX73_005355	0.36	-0.6
1,145,639	-		TX73_005355	0.37	-0.4
1,145,668	-		TX73_005355	0.40	+1.6
1,145,674	+		TX73_005355	0.41	-0.3
1,145,708	+		TX73_005355	0.46	-0.8
1,145,728	+		TX73_005355	0.48	-0.1
1,145,730	+		TX73_005355	0.48	-0.9
1,145,738	-		TX73_005355	0.49	-0.2
1,145,743	+		TX73_005355	0.50	-0.3
1,145,775	+		TX73_005355	0.54	-0.9
1,145,800	+		TX73_005355	0.57	-0.1
1,145,800	+		TX73_005355	0.57	+0.5
1,145,808	-		TX73_005355	0.58	-0.4
1,145,827	-		TX73_005355	0.61	-0.7
1,145,832	+		TX73_005355	0.61	-2.1
1,145,832	+		TX73_005355	0.61	-0.5
1,145,842	+		TX73_005355	0.63	+0.3
1,145,853	+		TX73_005355	0.64	-0.1
1,145,861	-		TX73_005355	0.65	-0.1
1,145,861	-		TX73_005355	0.65	+0.4
1,145,874	+		TX73_005355	0.67	+0.4
1,145,888	-		TX73_005355	0.69	-1.7
1,145,891	+		TX73_005355	0.69	-1.8
1,145,899	-		TX73_005355	0.70	+0.6
1,145,903	+		TX73_005355	0.71	-1.9
1,145,908	+		TX73_005355	0.71	-1.0
1,145,908	+		TX73_005355	0.71	-0.5
1,145,917	+		TX73_005355	0.72	-1.9
1,145,917	-		TX73_005355	0.72	-0.4
1,145,929	+		TX73_005355	0.74	+0.0
1,145,937	-		TX73_005355	0.75	-1.4
1,145,939	+		TX73_005355	0.75	+0.6
1,145,947	-		TX73_005355	0.76	+0.3
1,145,947	-		TX73_005355	0.76	-1.7
1,145,956	+		TX73_005355	0.77	+0.2
1,145,958	+		TX73_005355	0.78	-0.3
1,145,963	+		TX73_005355	0.78	-0.3
1,145,987	+		TX73_005355	0.81	-0.1
1,146,003	+		TX73_005355	0.83	-0.7
1,146,011	-		TX73_005355	0.84	-1.1
1,146,064	+				-0.5
1,146,075	-				-1.2
1,146,090	-				-1.7
1,146,108	+				-0.5
1,146,126	+				-1.2
1,146,126	+				-0.6
1,146,126	+				+0.2
1,146,126	+				-1.0
1,146,126	+				+0.5
1,146,160	+				-0.0
1,146,165	+				-1.0
1,146,165	+				-0.1
1,146,165	+				-0.7
1,146,165	+				-0.6
1,146,166	-				+0.2
1,146,166	-				-1.2
1,146,166	-				+0.2
1,146,166	-				+0.6
1,146,173	-				+1.0
1,146,173	-				+0.3
1,146,183	+				-1.1
1,146,207	-				+0.8
1,146,296	-				-0.7
1,146,300	+				-1.5
1,146,329	+				+0.3
1,146,347	+				-0.3
1,146,355	-				+1.2
1,146,360	+				-0.0
1,146,362	+				+1.4
1,146,366	-				+0.4
1,146,366	-				+0.7
1,146,368	+				+0.1
1,146,388	-				+0.5
1,146,403	+				-0.2
1,146,408	+				+1.1
1,146,408	+				+1.9
1,146,408	+				+0.4
1,146,408	+				-0.3
1,146,408	-				+0.3
1,146,413	+				+0.5
1,146,416	-				-0.2
1,146,416	-				+0.8
1,146,416	-				+0.7
1,146,416	-				+0.5
1,146,421	-				+0.1
1,146,473	+		TX73_005360	0.11	+0.9
1,146,491	+		TX73_005360	0.13	+0.4
1,146,505	+		TX73_005360	0.14	-0.2
1,146,507	-		TX73_005360	0.14	-0.3
1,146,508	+		TX73_005360	0.14	+0.4
1,146,528	+		TX73_005360	0.17	+1.4
1,146,529	+		TX73_005360	0.17	+0.4
1,146,529	+		TX73_005360	0.17	-0.0
1,146,570	-		TX73_005360	0.21	+0.3
1,146,574	-		TX73_005360	0.22	+0.3
1,146,584	+		TX73_005360	0.23	+0.1
1,146,586	+		TX73_005360	0.23	+0.4
1,146,592	-		TX73_005360	0.24	+0.1
1,146,592	-		TX73_005360	0.24	-0.2
1,146,592	-		TX73_005360	0.24	-0.2
1,146,592	-		TX73_005360	0.24	-0.2
1,146,602	+		TX73_005360	0.25	-0.2
1,146,639	+		TX73_005360	0.29	+0.9
1,146,657	-		TX73_005360	0.31	+0.4
1,146,661	-		TX73_005360	0.31	-0.3
1,146,666	-		TX73_005360	0.32	+0.3
1,146,670	+		TX73_005360	0.32	+0.4
1,146,680	-		TX73_005360	0.33	+4.1
1,146,690	+		TX73_005360	0.35	-0.5
1,146,690	+		TX73_005360	0.35	+0.0
1,146,700	-		TX73_005360	0.36	-1.3
1,146,740	-		TX73_005360	0.40	+0.2
1,146,755	+		TX73_005360	0.42	-0.4
1,146,755	+		TX73_005360	0.42	+0.8
1,146,755	+		TX73_005360	0.42	+0.6
1,146,760	+		TX73_005360	0.42	-0.5
1,146,763	-		TX73_005360	0.43	+0.6
1,146,763	-		TX73_005360	0.43	-0.7
1,146,798	+		TX73_005360	0.47	-0.3
1,146,825	-		TX73_005360	0.50	-0.4
1,146,843	+		TX73_005360	0.51	-0.1
1,146,854	+		TX73_005360	0.53	+0.8
1,146,854	+		TX73_005360	0.53	-0.3
1,146,854	+		TX73_005360	0.53	+0.4
1,146,854	+		TX73_005360	0.53	-0.0
1,146,854	+		TX73_005360	0.53	+0.2
1,146,862	-		TX73_005360	0.54	-0.5
1,146,862	-		TX73_005360	0.54	+0.9
1,146,862	-		TX73_005360	0.54	+0.6
1,146,872	+		TX73_005360	0.55	+1.0
1,146,872	+		TX73_005360	0.55	+0.2
1,146,880	-		TX73_005360	0.56	+0.2
1,146,933	+		TX73_005360	0.61	-0.8
1,146,934	-		TX73_005360	0.62	+0.2
1,146,934	-		TX73_005360	0.62	-0.2
1,146,947	+		TX73_005360	0.63	-0.8
1,146,957	+		TX73_005360	0.64	+2.2
1,146,959	+		TX73_005360	0.64	-0.5
1,146,959	+		TX73_005360	0.64	-0.3
1,146,971	+		TX73_005360	0.66	+0.2
1,146,971	+		TX73_005360	0.66	+0.4
1,146,971	+		TX73_005360	0.66	-0.0
1,146,971	+		TX73_005360	0.66	-1.2
1,146,978	-		TX73_005360	0.66	-0.5
1,146,979	-		TX73_005360	0.67	+0.1
1,146,979	-		TX73_005360	0.67	-1.1
1,146,980	-		TX73_005360	0.67	+0.1
1,146,980	-		TX73_005360	0.67	+0.1
1,146,983	+		TX73_005360	0.67	+0.4
1,146,995	+		TX73_005360	0.68	+0.2
1,147,003	-		TX73_005360	0.69	-0.5
1,147,009	-		TX73_005360	0.70	-1.0
1,147,026	+		TX73_005360	0.72	+0.0
1,147,026	+		TX73_005360	0.72	+0.2
1,147,027	-		TX73_005360	0.72	+1.5
1,147,039	-		TX73_005360	0.73	-0.6
1,147,056	-		TX73_005360	0.75	-0.9
1,147,056	-		TX73_005360	0.75	+2.0
1,147,056	-		TX73_005360	0.75	-0.6
1,147,063	+		TX73_005360	0.76	-0.9
1,147,095	+		TX73_005360	0.79	+0.6
1,147,095	+		TX73_005360	0.79	+0.4
1,147,095	+		TX73_005360	0.79	-0.4
1,147,100	+		TX73_005360	0.80	+1.0
1,147,103	-		TX73_005360	0.80	-2.4
1,147,103	-		TX73_005360	0.80	-0.7
1,147,109	+		TX73_005360	0.81	-0.1
1,147,121	+		TX73_005360	0.82	-0.6
1,147,121	+		TX73_005360	0.82	+0.5
1,147,131	+		TX73_005360	0.83	+1.0