Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_021335

Experiment: PM with p-Coumaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with p-Coumaric (C)
4,660,005	+		TX73_021330	0.22	-0.8
4,660,010	+		TX73_021330	0.23	-1.0
4,660,015	+		TX73_021330	0.23	-0.2
4,660,016	-		TX73_021330	0.24	+1.1
4,660,050	+		TX73_021330	0.27	+0.2
4,660,088	+		TX73_021330	0.31	+0.3
4,660,127	-		TX73_021330	0.35	-0.8
4,660,134	-		TX73_021330	0.35	-0.7
4,660,149	+		TX73_021330	0.37	+0.5
4,660,156	-		TX73_021330	0.37	+1.0
4,660,158	-		TX73_021330	0.38	-1.7
4,660,168	+		TX73_021330	0.39	-0.4
4,660,191	-		TX73_021330	0.41	+0.2
4,660,193	+		TX73_021330	0.41	-0.4
4,660,201	-		TX73_021330	0.42	+2.1
4,660,219	+		TX73_021330	0.44	+0.8
4,660,242	-		TX73_021330	0.46	+0.9
4,660,244	+		TX73_021330	0.46	+1.1
4,660,262	-		TX73_021330	0.48	+0.4
4,660,262	-		TX73_021330	0.48	-0.5
4,660,269	+		TX73_021330	0.49	+0.5
4,660,280	+		TX73_021330	0.50	-0.0
4,660,287	-		TX73_021330	0.50	+1.1
4,660,338	-		TX73_021330	0.55	+0.1
4,660,357	-		TX73_021330	0.57	+0.1
4,660,357	-		TX73_021330	0.57	+1.3
4,660,359	+		TX73_021330	0.57	+0.0
4,660,362	-		TX73_021330	0.58	-0.3
4,660,374	+		TX73_021330	0.59	+0.0
4,660,389	-		TX73_021330	0.60	-0.3
4,660,411	+		TX73_021330	0.63	+0.4
4,660,444	+		TX73_021330	0.66	+0.6
4,660,457	-		TX73_021330	0.67	+0.3
4,660,472	-		TX73_021330	0.69	+1.6
4,660,483	+		TX73_021330	0.70	-0.1
4,660,483	+		TX73_021330	0.70	+0.1
4,660,488	+		TX73_021330	0.70	+0.3
4,660,491	-		TX73_021330	0.70	-0.5
4,660,491	-		TX73_021330	0.70	-0.4
4,660,491	-		TX73_021330	0.70	-0.2
4,660,491	-		TX73_021330	0.70	+1.5
4,660,491	-		TX73_021330	0.70	+0.5
4,660,491	-		TX73_021330	0.70	-0.2
4,660,525	+		TX73_021330	0.74	+0.2
4,660,543	+		TX73_021330	0.76	-1.6
4,660,560	+		TX73_021330	0.77	-0.4
4,660,602	-		TX73_021330	0.81	-0.5
4,660,643	-		TX73_021330	0.85	-0.7
4,660,646	-		TX73_021330	0.86	-1.5
4,660,712	+				+0.5
4,660,762	+				-1.2
4,660,764	-				-0.5
4,660,786	+				-0.4
4,660,787	+				+0.3
4,660,794	-				-0.8
4,660,827	-				+0.4
4,660,860	-				-1.0
4,660,895	-		TX73_021335	0.12	+0.9
4,660,908	-		TX73_021335	0.14	+0.3
4,660,921	-		TX73_021335	0.16	+1.1
4,660,926	+		TX73_021335	0.16	+1.4
4,660,939	-		TX73_021335	0.18	-0.5
4,660,972	+		TX73_021335	0.23	-0.2
4,660,976	-		TX73_021335	0.24	+1.4
4,661,036	-		TX73_021335	0.32	-0.1
4,661,041	-		TX73_021335	0.33	+1.2
4,661,070	-		TX73_021335	0.37	+0.9
4,661,116	+		TX73_021335	0.44	+0.9
4,661,149	+		TX73_021335	0.49	-1.3
4,661,149	-		TX73_021335	0.49	+0.5
4,661,169	+		TX73_021335	0.52	+1.1
4,661,189	-		TX73_021335	0.55	-0.0
4,661,205	-		TX73_021335	0.57	-0.3
4,661,286	+		TX73_021335	0.69	+0.3
4,661,289	-		TX73_021335	0.69	-0.6
4,661,289	-		TX73_021335	0.69	+0.8
4,661,294	-		TX73_021335	0.70	+0.4
4,661,311	+		TX73_021335	0.73	-0.5
4,661,340	+		TX73_021335	0.77	+0.1
4,661,340	+		TX73_021335	0.77	+1.0
4,661,382	-		TX73_021335	0.83	-0.2
4,661,395	-		TX73_021335	0.85	+0.5
4,661,396	-		TX73_021335	0.85	+0.2
4,661,398	+		TX73_021335	0.85	+1.9
4,661,418	+		TX73_021335	0.88	+1.5
4,661,418	+		TX73_021335	0.88	+0.4
4,661,444	+				+0.3
4,661,444	-				+1.0
4,661,453	+				-1.7
4,661,454	-				+0.3
4,661,485	-				-0.1
4,661,509	+				+0.5
4,661,624	+				+1.4
4,661,632	-		TX73_021340	0.10	+1.2
4,661,665	-		TX73_021340	0.13	+1.8
4,661,665	-		TX73_021340	0.13	+0.5
4,661,698	-		TX73_021340	0.15	+0.2
4,661,708	-		TX73_021340	0.16	+1.3
4,661,727	-		TX73_021340	0.17	+1.4
4,661,765	+		TX73_021340	0.20	+0.6
4,661,766	+		TX73_021340	0.20	+1.1
4,661,772	+		TX73_021340	0.21	+0.0
4,661,773	-		TX73_021340	0.21	+0.5
4,661,774	-		TX73_021340	0.21	+1.6
4,661,781	+		TX73_021340	0.22	+0.6
4,661,781	+		TX73_021340	0.22	+0.9
4,661,781	+		TX73_021340	0.22	+0.8
4,661,781	+		TX73_021340	0.22	+0.3
4,661,781	+		TX73_021340	0.22	+0.1
4,661,781	+		TX73_021340	0.22	+0.1
4,661,789	-		TX73_021340	0.22	+1.4
4,661,789	-		TX73_021340	0.22	+1.1
4,661,789	-		TX73_021340	0.22	+1.6
4,661,789	-		TX73_021340	0.22	+0.8
4,661,789	-		TX73_021340	0.22	+0.1
4,661,789	-		TX73_021340	0.22	+0.1
4,661,789	-		TX73_021340	0.22	+0.9
4,661,835	+		TX73_021340	0.26	+1.1
4,661,849	+		TX73_021340	0.27	-0.2
4,661,854	+		TX73_021340	0.27	+1.3
4,661,857	-		TX73_021340	0.27	+0.9
4,661,857	-		TX73_021340	0.27	+2.0
4,661,862	-		TX73_021340	0.28	+1.6
4,661,862	-		TX73_021340	0.28	+1.3
4,661,862	-		TX73_021340	0.28	+0.4
4,661,885	-		TX73_021340	0.30	+0.8
4,661,895	+		TX73_021340	0.30	+1.4
4,661,951	+		TX73_021340	0.35	-1.2
4,661,959	-		TX73_021340	0.35	+0.3
4,661,995	+		TX73_021340	0.38	+1.1
4,661,995	+		TX73_021340	0.38	+1.9
4,662,003	-		TX73_021340	0.39	+0.8
4,662,003	-		TX73_021340	0.39	+0.7
4,662,013	-		TX73_021340	0.40	+0.3
4,662,024	-		TX73_021340	0.40	-0.3
4,662,025	-		TX73_021340	0.40	-0.1
4,662,054	+		TX73_021340	0.43	+0.2
4,662,070	-		TX73_021340	0.44	+0.3
4,662,097	-		TX73_021340	0.46	+0.0
4,662,128	-		TX73_021340	0.48	+0.6
4,662,144	+		TX73_021340	0.50	+0.4
4,662,178	+		TX73_021340	0.52	-0.3
4,662,213	+		TX73_021340	0.55	+0.8
4,662,244	+		TX73_021340	0.57	+1.1
4,662,343	+		TX73_021340	0.65	+1.1
4,662,351	-		TX73_021340	0.66	+1.6
4,662,351	-		TX73_021340	0.66	+0.2
4,662,353	+		TX73_021340	0.66	+1.2
4,662,356	-		TX73_021340	0.66	+0.5
4,662,356	-		TX73_021340	0.66	+1.4
4,662,359	+		TX73_021340	0.66	+0.0
4,662,359	+		TX73_021340	0.66	+0.6
4,662,406	+		TX73_021340	0.70	+0.6
4,662,447	-		TX73_021340	0.73	+1.0
4,662,450	+		TX73_021340	0.73	+1.1
4,662,458	-		TX73_021340	0.74	+0.4
4,662,460	+		TX73_021340	0.74	+0.8
4,662,463	-		TX73_021340	0.74	+2.4