Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024055

Experiment: NFM with acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NFM with acetate (C)
5,211,406	+		TX73_024045	0.76	-3.6
5,211,440	+		TX73_024045	0.78	-2.3
5,211,440	+		TX73_024045	0.78	-3.0
5,211,440	+		TX73_024045	0.78	-2.0
5,211,448	-		TX73_024045	0.79	-3.8
5,211,555	-		TX73_024045	0.86	-3.2
5,211,583	+		TX73_024045	0.88	-2.9
5,211,665	+				-4.7
5,211,680	+				-1.9
5,211,784	-				-0.5
5,211,822	+				-2.8
5,211,851	+				-2.0
5,211,859	-				-0.2
5,211,859	-				-0.8
5,211,882	+				-2.3
5,211,888	-				+1.2
5,211,890	-				-0.9
5,211,902	+				-4.3
5,211,915	-				-0.1
5,211,933	+				-1.3
5,211,941	-				-1.5
5,211,950	+				-2.7
5,211,953	+				-2.1
5,211,978	-		TX73_024050	0.22	-1.7
5,211,982	+		TX73_024050	0.24	-3.1
5,212,009	+		TX73_024050	0.38	-4.6
5,212,021	-		TX73_024050	0.44	-2.2
5,212,045	+		TX73_024050	0.56	-1.9
5,212,070	-		TX73_024050	0.69	-2.0
5,212,089	+		TX73_024050	0.79	-2.7
5,212,124	+				-4.3
5,212,202	+				-2.8
5,212,223	+				-5.0
5,212,242	+				-1.9
5,212,244	-				-4.0
5,212,250	-				-2.0
5,212,251	+				-2.8
5,212,252	-				-1.7
5,212,263	+				-2.0
5,212,267	-				-2.2
5,212,280	+				+0.2
5,212,280	+				-0.3
5,212,280	+				-1.1
5,212,280	+				-0.6
5,212,331	-				-0.0
5,212,333	+				+1.2
5,212,334	+				+0.2
5,212,342	-				-0.4
5,212,365	-				+0.6
5,212,379	-				+0.1
5,212,400	+				+1.1
5,212,400	+				-1.2
5,212,400	+				+0.5
5,212,400	+				+0.6
5,212,403	-				-0.3
5,212,408	-				-0.4
5,212,408	-				-0.4
5,212,408	-				+0.5
5,212,416	+				-2.4
5,212,437	+				-3.6
5,212,452	+				-3.4
5,212,483	+				-2.7
5,212,486	+				-3.3
5,212,486	+				-3.1
5,212,486	+				-0.6
5,212,489	-				-2.9
5,212,489	-				-2.8
5,212,522	-				-2.1
5,212,613	-		TX73_024055	0.12	-2.7
5,212,620	+		TX73_024055	0.12	-1.7
5,212,622	-		TX73_024055	0.13	-2.9
5,212,648	-		TX73_024055	0.14	-2.8
5,212,665	-		TX73_024055	0.15	-3.5
5,212,684	+		TX73_024055	0.16	-2.8
5,212,694	+		TX73_024055	0.17	-5.6
5,212,699	+		TX73_024055	0.17	-4.0
5,212,702	-		TX73_024055	0.17	-1.7
5,212,707	-		TX73_024055	0.17	-3.7
5,212,707	-		TX73_024055	0.17	-4.2
5,212,714	-		TX73_024055	0.18	-1.8
5,212,719	-		TX73_024055	0.18	-1.8
5,212,730	+		TX73_024055	0.19	-1.2
5,212,807	+		TX73_024055	0.23	-4.3
5,212,855	+		TX73_024055	0.26	-3.5
5,212,877	-		TX73_024055	0.27	-3.3
5,212,889	-		TX73_024055	0.28	-4.8
5,212,940	+		TX73_024055	0.31	-2.0
5,212,982	+		TX73_024055	0.33	-2.5
5,212,982	+		TX73_024055	0.33	-3.3
5,212,990	-		TX73_024055	0.34	-3.2
5,212,990	-		TX73_024055	0.34	-1.4
5,212,991	+		TX73_024055	0.34	-3.0
5,212,991	+		TX73_024055	0.34	-2.7
5,212,993	+		TX73_024055	0.34	-2.7
5,212,999	-		TX73_024055	0.34	-3.6
5,212,999	-		TX73_024055	0.34	-2.3
5,212,999	-		TX73_024055	0.34	-3.0
5,213,025	+		TX73_024055	0.35	-2.8
5,213,033	-		TX73_024055	0.36	-3.8
5,213,062	+		TX73_024055	0.38	-2.9
5,213,078	-		TX73_024055	0.39	-3.5
5,213,093	+		TX73_024055	0.39	-3.9
5,213,118	+		TX73_024055	0.41	-2.3
5,213,149	-		TX73_024055	0.43	-2.8
5,213,149	-		TX73_024055	0.43	-3.0
5,213,149	-		TX73_024055	0.43	-3.1
5,213,202	+		TX73_024055	0.46	-2.9
5,213,202	+		TX73_024055	0.46	-3.2
5,213,244	-		TX73_024055	0.48	-4.1
5,213,244	-		TX73_024055	0.48	-2.7
5,213,252	-		TX73_024055	0.48	-3.8
5,213,254	-		TX73_024055	0.49	-4.2
5,213,254	-		TX73_024055	0.49	-4.6
5,213,255	+		TX73_024055	0.49	-4.0
5,213,255	+		TX73_024055	0.49	-2.2
5,213,263	-		TX73_024055	0.49	-1.4
5,213,263	-		TX73_024055	0.49	-1.9
5,213,287	+		TX73_024055	0.50	-2.2
5,213,392	+		TX73_024055	0.56	-5.6
5,213,423	+		TX73_024055	0.58	-2.5
5,213,431	-		TX73_024055	0.59	-2.8
5,213,474	+		TX73_024055	0.61	-3.5
5,213,480	+		TX73_024055	0.61	-0.0
5,213,480	+		TX73_024055	0.61	-3.2
5,213,480	+		TX73_024055	0.61	-1.9
5,213,488	-		TX73_024055	0.62	-1.7
5,213,488	-		TX73_024055	0.62	-3.8
5,213,488	-		TX73_024055	0.62	-1.3
5,213,537	+		TX73_024055	0.65	-3.0
5,213,549	+		TX73_024055	0.65	-4.7
5,213,567	-		TX73_024055	0.66	-2.3
5,213,584	+		TX73_024055	0.67	-3.7
5,213,584	+		TX73_024055	0.67	-3.1
5,213,619	+		TX73_024055	0.69	-2.9
5,213,622	+		TX73_024055	0.70	-4.1
5,213,637	+		TX73_024055	0.70	-3.8
5,213,656	-		TX73_024055	0.71	-0.4
5,213,696	+		TX73_024055	0.74	+1.0
5,213,769	+		TX73_024055	0.78	-3.0
5,213,827	-		TX73_024055	0.81	-0.8
5,213,876	+		TX73_024055	0.84	-2.0
5,213,895	+		TX73_024055	0.85	-2.7
5,213,896	-		TX73_024055	0.85	-2.7
5,213,898	+		TX73_024055	0.85	-3.7
5,213,960	-		TX73_024055	0.89	-4.3
5,213,993	+				-0.6
5,213,999	+				-3.5
5,213,999	+				-3.7
5,214,022	-				-3.0
5,214,029	+				-2.3
5,214,150	+				-0.5
5,214,164	-				+0.0
5,214,172	+				+0.2
5,214,180	-				-1.2
5,214,180	-				+0.5
5,214,267	-				+0.3
5,214,367	-				-0.0
5,214,468	-				+0.3
5,214,490	-				+0.6
5,214,541	+				+0.0
5,214,541	+				-1.4
5,214,549	+				+0.2
5,214,569	-		TX73_024060	0.12	+0.3
5,214,640	+		TX73_024060	0.21	-0.0
5,214,643	-		TX73_024060	0.21	+0.4
5,214,643	-		TX73_024060	0.21	+0.1
5,214,643	-		TX73_024060	0.21	+0.5
5,214,667	-		TX73_024060	0.24	-0.4
5,214,674	-		TX73_024060	0.25	+0.7
5,214,700	+		TX73_024060	0.28	-0.6
5,214,713	-		TX73_024060	0.30	-0.5
5,214,723	-		TX73_024060	0.31	-0.1
5,214,727	+		TX73_024060	0.31	+0.0
5,214,791	-		TX73_024060	0.39	+1.3
5,214,796	-		TX73_024060	0.40	+0.5
5,214,837	+		TX73_024060	0.45	-0.1
5,214,845	-		TX73_024060	0.46	-1.0
5,214,879	-		TX73_024060	0.50	+0.4
5,214,880	+		TX73_024060	0.50	+0.2
5,214,880	+		TX73_024060	0.50	-3.3
5,214,884	-		TX73_024060	0.50	+0.2
5,214,884	-		TX73_024060	0.50	+0.4
5,214,884	-		TX73_024060	0.50	+1.6
5,214,899	+		TX73_024060	0.52	-0.3
5,214,899	+		TX73_024060	0.52	+0.4
5,214,907	-		TX73_024060	0.53	-0.3
5,214,909	-		TX73_024060	0.54	+0.1
5,214,953	+		TX73_024060	0.59	-0.3
5,215,056	+		TX73_024060	0.71	-0.4