Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_008065

Experiment: PM with 4-Hydroxybenzoic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with 4-Hydroxybenzoic Acid (C)
1,742,871	-		TX73_008060	0.36	-0.5
1,742,896	+		TX73_008060	0.38	-0.2
1,742,896	+		TX73_008060	0.38	-1.2
1,742,930	+		TX73_008060	0.40	+0.7
1,742,968	+		TX73_008060	0.43	+0.5
1,742,982	-		TX73_008060	0.44	-1.7
1,743,035	+		TX73_008060	0.49	+0.6
1,743,142	-		TX73_008060	0.57	-0.4
1,743,185	-		TX73_008060	0.60	+0.2
1,743,255	-		TX73_008060	0.66	+0.4
1,743,281	-		TX73_008060	0.68	+0.5
1,743,281	-		TX73_008060	0.68	+0.2
1,743,345	+		TX73_008060	0.72	+0.6
1,743,399	+		TX73_008060	0.77	+2.5
1,743,441	-		TX73_008060	0.80	-1.0
1,743,474	-		TX73_008060	0.82	-3.0
1,743,550	+		TX73_008060	0.88	-0.7
1,743,550	+		TX73_008060	0.88	+0.5
1,743,594	+				+0.0
1,743,670	-				+0.7
1,743,697	+				-0.2
1,743,705	-				-2.4
1,743,864	-				+0.0
1,743,938	+				-0.6
1,743,976	+				-0.7
1,743,999	+				-0.5
1,744,035	-				-2.4
1,744,037	+				+0.1
1,744,058	+				+0.0
1,744,098	-		TX73_008065	0.11	-0.1
1,744,103	-		TX73_008065	0.12	-1.3
1,744,170	+		TX73_008065	0.15	-0.5
1,744,170	+		TX73_008065	0.15	-1.2
1,744,183	-		TX73_008065	0.15	+0.1
1,744,184	+		TX73_008065	0.15	+0.4
1,744,213	-		TX73_008065	0.17	+0.2
1,744,227	+		TX73_008065	0.17	-0.0
1,744,230	-		TX73_008065	0.18	+0.0
1,744,247	-		TX73_008065	0.18	-1.5
1,744,248	-		TX73_008065	0.18	-0.4
1,744,279	-		TX73_008065	0.20	-0.5
1,744,359	-		TX73_008065	0.24	+0.0
1,744,440	+		TX73_008065	0.27	+0.0
1,744,446	+		TX73_008065	0.28	-0.9
1,744,449	-		TX73_008065	0.28	-0.1
1,744,467	+		TX73_008065	0.29	-0.7
1,744,470	-		TX73_008065	0.29	+0.1
1,744,503	-		TX73_008065	0.30	+0.0
1,744,538	+		TX73_008065	0.32	-0.3
1,744,746	+		TX73_008065	0.42	+0.8
1,744,748	-		TX73_008065	0.42	-0.2
1,744,811	-		TX73_008065	0.45	-1.3
1,744,978	-		TX73_008065	0.53	+0.2
1,745,028	-		TX73_008065	0.55	-0.3
1,745,164	-		TX73_008065	0.62	-1.6
1,745,164	-		TX73_008065	0.62	-0.1
1,745,188	-		TX73_008065	0.63	-1.6
1,745,212	+		TX73_008065	0.64	-0.6
1,745,241	+		TX73_008065	0.65	-0.5
1,745,246	+		TX73_008065	0.66	-1.0
1,745,254	-		TX73_008065	0.66	-0.3
1,745,297	+		TX73_008065	0.68	+0.8
1,745,310	-		TX73_008065	0.69	-0.1
1,745,317	+		TX73_008065	0.69	-0.0
1,745,325	-		TX73_008065	0.69	-1.0
1,745,330	-		TX73_008065	0.69	+0.0
1,745,335	-		TX73_008065	0.70	-1.0
1,745,383	+		TX73_008065	0.72	-3.8
1,745,383	+		TX73_008065	0.72	-0.3
1,745,383	+		TX73_008065	0.72	+0.6
1,745,383	+		TX73_008065	0.72	-0.7
1,745,391	-		TX73_008065	0.72	-0.7
1,745,391	-		TX73_008065	0.72	-0.0
1,745,391	-		TX73_008065	0.72	+1.2
1,745,391	-		TX73_008065	0.72	+0.2
1,745,391	-		TX73_008065	0.72	-0.3
1,745,406	-		TX73_008065	0.73	+0.4
1,745,421	+		TX73_008065	0.74	-0.4
1,745,430	-		TX73_008065	0.74	-0.8
1,745,484	-		TX73_008065	0.77	-0.2
1,745,498	+		TX73_008065	0.77	-0.1
1,745,545	-		TX73_008065	0.80	+1.1
1,745,607	-		TX73_008065	0.83	-0.5
1,745,627	-		TX73_008065	0.84	+0.2
1,745,630	-		TX73_008065	0.84	+0.5
1,745,749	+		TX73_008065	0.89	-2.8
1,745,770	+				-0.9
1,745,782	-				+0.1
1,745,880	-				+0.8
1,745,888	+				-1.2
1,745,888	+				+0.8
1,745,953	+				+0.5
1,745,963	+				-0.8
1,745,963	+				-0.3
1,745,963	+				-1.4
1,745,971	-				-0.1
1,745,982	+				-0.4
1,745,990	-				-0.4
1,746,005	-				-2.5
1,746,006	+				-0.2
1,746,006	+				+0.4
1,746,014	-				+1.4
1,746,049	+				+0.1
1,746,049	+				-0.9
1,746,049	+				+0.4
1,746,057	-				+0.2
1,746,057	-				+0.3
1,746,075	-				-0.9
1,746,080	+				+0.4
1,746,090	+				-0.0
1,746,096	+				+0.1
1,746,105	-				+0.1
1,746,133	+				+0.3
1,746,141	-				-1.3
1,746,149	-				-0.4
1,746,197	-		TX73_008070	0.10	+0.6
1,746,200	-		TX73_008070	0.11	-0.2
1,746,212	-		TX73_008070	0.12	-0.3
1,746,224	+		TX73_008070	0.13	-2.6
1,746,224	+		TX73_008070	0.13	-0.4
1,746,224	+		TX73_008070	0.13	-0.6
1,746,232	-		TX73_008070	0.14	+0.1
1,746,232	-		TX73_008070	0.14	-0.4
1,746,232	-		TX73_008070	0.14	+1.4
1,746,232	-		TX73_008070	0.14	-1.0
1,746,232	-		TX73_008070	0.14	-0.3
1,746,245	-		TX73_008070	0.16	+0.1
1,746,259	+		TX73_008070	0.17	-0.9
1,746,261	+		TX73_008070	0.18	+0.8
1,746,274	-		TX73_008070	0.19	-0.7
1,746,281	+		TX73_008070	0.20	-1.2
1,746,283	+		TX73_008070	0.20	+0.5
1,746,283	+		TX73_008070	0.20	-0.2
1,746,284	-		TX73_008070	0.20	-0.2
1,746,284	-		TX73_008070	0.20	+0.2
1,746,305	+		TX73_008070	0.23	+0.7
1,746,375	+		TX73_008070	0.31	+0.5
1,746,383	-		TX73_008070	0.32	+0.1
1,746,383	-		TX73_008070	0.32	+0.1
1,746,443	+		TX73_008070	0.38	-0.1
1,746,504	+		TX73_008070	0.45	+0.5
1,746,509	+		TX73_008070	0.46	-1.2
1,746,512	-		TX73_008070	0.46	+0.2
1,746,542	+		TX73_008070	0.50	-0.5
1,746,603	+		TX73_008070	0.57	-0.9
1,746,603	+		TX73_008070	0.57	-0.9
1,746,606	-		TX73_008070	0.57	-2.6
1,746,629	-		TX73_008070	0.60	+0.9
1,746,657	+		TX73_008070	0.63	-0.1
1,746,673	+		TX73_008070	0.65	-0.9
1,746,673	+		TX73_008070	0.65	-1.4
1,746,681	-		TX73_008070	0.66	-0.3
1,746,683	-		TX73_008070	0.66	-0.6
1,746,737	-		TX73_008070	0.72	+0.2
1,746,744	+		TX73_008070	0.73	+0.3
1,746,745	+		TX73_008070	0.73	-0.1
1,746,770	-		TX73_008070	0.76	+0.6
1,746,771	+		TX73_008070	0.76	-0.4
1,746,771	+		TX73_008070	0.76	+1.0
1,746,771	+		TX73_008070	0.76	-0.4
1,746,771	-		TX73_008070	0.76	-2.6
1,746,779	-		TX73_008070	0.77	-0.2
1,746,779	-		TX73_008070	0.77	-0.5
1,746,783	+		TX73_008070	0.77	-0.3
1,746,796	+		TX73_008070	0.79	+0.3
1,746,796	+		TX73_008070	0.79	-0.9
1,746,796	+		TX73_008070	0.79	-0.6
1,746,872	-		TX73_008070	0.87	-0.3
1,746,883	-		TX73_008070	0.89	-0.9
1,746,888	+		TX73_008070	0.89	+0.8
1,746,896	-				-0.2
1,746,914	-				+0.1
1,746,950	-				-1.8
1,746,964	-				+0.8