Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS17200

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
3,753,272	-		ABIE51_RS17195	0.73	-0.2
3,753,319	+		ABIE51_RS17195	0.80	-0.6
3,753,319	+		ABIE51_RS17195	0.80	-0.5
3,753,319	+		ABIE51_RS17195	0.80	-0.6
3,753,319	+		ABIE51_RS17195	0.80	-0.4
3,753,319	+		ABIE51_RS17195	0.80	-0.5
3,753,319	+		ABIE51_RS17195	0.80	-0.5
3,753,320	-		ABIE51_RS17195	0.80	-0.6
3,753,320	-		ABIE51_RS17195	0.80	-1.0
3,753,320	-		ABIE51_RS17195	0.80	-0.9
3,753,320	-		ABIE51_RS17195	0.80	-0.2
3,753,320	-		ABIE51_RS17195	0.80	-0.7
3,753,668	+				+0.7
3,753,668	+				+0.6
3,753,668	+				+0.3
3,753,668	+				+0.4
3,753,668	+				-0.0
3,753,668	+				-0.2
3,753,668	+				+0.3
3,753,669	-				-0.0
3,753,669	-				+1.0
3,753,669	-				-0.3
3,753,669	-				+2.0
3,753,669	-				+0.5
3,753,669	-				-0.5
3,753,669	-				+0.5
3,753,669	-				-0.7
3,753,669	-				+0.3
3,753,669	-				+0.0
3,753,669	-				+0.5
3,753,809	+				+0.4
3,753,809	+				+0.1
3,753,870	+				+0.9
3,753,870	+				+0.6
3,753,870	+				-0.5
3,753,870	+				+0.2
3,753,870	+				+0.3
3,753,870	+				+0.3
3,753,871	-				+0.1
3,753,871	-				-0.1
3,753,871	-				-0.2
3,753,871	-				+0.9
3,753,971	+				+1.5
3,753,971	+				-0.3
3,753,971	+				+0.5
3,753,971	+				+0.8
3,753,971	+				+0.3
3,753,971	+				+0.6
3,753,971	+				+0.8
3,753,972	-				+0.2
3,753,972	-				+0.2
3,753,972	-				+0.2
3,753,972	-				-0.1
3,753,972	-				+0.9
3,753,972	-				+0.0
3,753,980	+				+0.4
3,753,981	-				+0.3
3,754,010	+				+1.0
3,754,010	+				+1.0
3,754,011	-				+0.9
3,754,027	+				+0.6
3,754,028	-				+0.2
3,754,028	-				+1.9
3,754,028	-				+0.3
3,754,028	-				+0.5
3,754,143	+				-2.8
3,754,143	+				-1.1
3,754,144	-				-0.7
3,754,144	-				+0.5
3,754,144	-				-1.8
3,754,144	-				+0.1
3,754,144	-				-0.5
3,754,144	-				-1.7
3,754,219	+				-0.9
3,754,275	+		ABIE51_RS17200	0.14	+0.0
3,754,275	+		ABIE51_RS17200	0.14	-0.9
3,754,275	+		ABIE51_RS17200	0.14	-2.0
3,754,275	+		ABIE51_RS17200	0.14	-1.0
3,754,275	+		ABIE51_RS17200	0.14	-0.9
3,754,275	+		ABIE51_RS17200	0.14	-1.0
3,754,275	+		ABIE51_RS17200	0.14	-2.5
3,754,276	-		ABIE51_RS17200	0.14	-1.9
3,754,276	-		ABIE51_RS17200	0.14	-2.5
3,754,329	+		ABIE51_RS17200	0.18	-2.9
3,754,329	+		ABIE51_RS17200	0.18	-1.0
3,754,329	+		ABIE51_RS17200	0.18	-3.1
3,754,329	+		ABIE51_RS17200	0.18	-1.9
3,754,329	+		ABIE51_RS17200	0.18	-1.2
3,754,329	+		ABIE51_RS17200	0.18	-2.6
3,754,330	-		ABIE51_RS17200	0.18	-2.4
3,754,330	-		ABIE51_RS17200	0.18	-0.9
3,754,330	-		ABIE51_RS17200	0.18	-1.0
3,754,458	+		ABIE51_RS17200	0.28	-2.5
3,754,458	+		ABIE51_RS17200	0.28	-0.9
3,754,635	+		ABIE51_RS17200	0.41	-1.5
3,754,636	-		ABIE51_RS17200	0.41	-2.6
3,754,803	+		ABIE51_RS17200	0.54	-0.1
3,754,803	+		ABIE51_RS17200	0.54	-1.1
3,754,804	-		ABIE51_RS17200	0.54	-0.8
3,754,848	+		ABIE51_RS17200	0.58	-1.2
3,754,947	+		ABIE51_RS17200	0.65	-2.1
3,754,947	+		ABIE51_RS17200	0.65	-2.1
3,754,947	+		ABIE51_RS17200	0.65	-2.0
3,754,947	+		ABIE51_RS17200	0.65	-2.1
3,754,948	-		ABIE51_RS17200	0.65	-1.1
3,754,948	-		ABIE51_RS17200	0.65	-1.5
3,754,948	-		ABIE51_RS17200	0.65	-1.3
3,754,948	-		ABIE51_RS17200	0.65	+0.9
3,754,948	-		ABIE51_RS17200	0.65	-1.4
3,754,948	-		ABIE51_RS17200	0.65	-1.0
3,755,017	-		ABIE51_RS17200	0.70	+0.1
3,755,017	-		ABIE51_RS17200	0.70	-0.7
3,755,122	-		ABIE51_RS17200	0.79	-1.5
3,755,122	-		ABIE51_RS17200	0.79	-1.6
3,755,122	-		ABIE51_RS17200	0.79	-3.8
3,755,178	+		ABIE51_RS17200	0.83	-1.0
3,755,208	+		ABIE51_RS17200	0.85	-1.7
3,755,208	+		ABIE51_RS17200	0.85	-2.2
3,755,208	+		ABIE51_RS17200	0.85	-1.4
3,755,208	+		ABIE51_RS17200	0.85	-0.5
3,755,208	+		ABIE51_RS17200	0.85	-1.7
3,755,209	-		ABIE51_RS17200	0.85	-1.7
3,755,209	-		ABIE51_RS17200	0.85	+0.5
3,755,209	-		ABIE51_RS17200	0.85	-1.9
3,755,209	-		ABIE51_RS17200	0.85	-2.9
3,755,212	+		ABIE51_RS17200	0.85	-2.6
3,755,212	+		ABIE51_RS17200	0.85	-1.2
3,755,212	+		ABIE51_RS17200	0.85	-1.4
3,755,213	-		ABIE51_RS17200	0.86	-0.3
3,755,213	-		ABIE51_RS17200	0.86	-0.0
3,755,256	+		ABIE51_RS17200	0.89	-1.3
3,755,256	+		ABIE51_RS17200	0.89	-1.2
3,755,256	+		ABIE51_RS17200	0.89	-2.7
3,755,256	+		ABIE51_RS17200	0.89	-0.9
3,755,257	-		ABIE51_RS17200	0.89	-0.9
3,755,257	-		ABIE51_RS17200	0.89	-2.5
3,755,257	-		ABIE51_RS17200	0.89	+0.9
3,755,257	-		ABIE51_RS17200	0.89	-1.7
3,755,257	-		ABIE51_RS17200	0.89	-1.9
3,755,257	-		ABIE51_RS17200	0.89	-0.4
3,755,495	+				-0.5
3,755,496	-				+0.1
3,755,697	+				+0.8
3,755,697	+				+0.3
3,755,697	+				+0.5
3,755,697	+				+0.2
3,755,698	-				+0.3
3,755,698	-				-1.1
3,755,698	-				+0.1
3,755,698	-				-0.4
3,755,807	-				+0.2
3,755,807	-				+0.6
3,755,962	-				+1.3
3,755,962	-				+1.0
3,755,962	-				+1.0
3,755,962	-				+1.1
3,755,962	-				+0.4
3,755,962	-				+0.5
3,755,962	-				-0.7
3,755,962	-				+0.2
3,756,340	+				+1.5
3,756,340	+				+0.6
3,756,340	+				-0.4
3,756,340	+				+0.4