Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS16585

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
3,602,456	+		ABIE51_RS16575	0.59	+0.5
3,602,456	+		ABIE51_RS16575	0.59	+0.2
3,602,456	+		ABIE51_RS16575	0.59	+0.4
3,602,456	+		ABIE51_RS16575	0.59	+0.2
3,602,456	+		ABIE51_RS16575	0.59	+0.0
3,602,456	+		ABIE51_RS16575	0.59	+0.3
3,602,456	+		ABIE51_RS16575	0.59	+1.1
3,602,456	+		ABIE51_RS16575	0.59	-0.2
3,602,456	+		ABIE51_RS16575	0.59	-0.4
3,602,457	-		ABIE51_RS16575	0.60	+0.1
3,602,457	-		ABIE51_RS16575	0.60	+1.3
3,602,457	-		ABIE51_RS16575	0.60	+0.6
3,602,457	-		ABIE51_RS16575	0.60	+0.9
3,602,457	-		ABIE51_RS16575	0.60	+0.7
3,602,674	+		ABIE51_RS16580	0.11	+0.2
3,602,674	+		ABIE51_RS16580	0.11	+1.5
3,602,674	+		ABIE51_RS16580	0.11	-1.0
3,602,675	-		ABIE51_RS16580	0.11	-0.2
3,602,675	-		ABIE51_RS16580	0.11	+0.6
3,602,675	-		ABIE51_RS16580	0.11	+0.0
3,603,172	+		ABIE51_RS16580	0.80	-0.5
3,603,172	+		ABIE51_RS16580	0.80	-0.3
3,603,172	+		ABIE51_RS16580	0.80	-0.2
3,603,173	-		ABIE51_RS16580	0.81	+0.5
3,603,173	-		ABIE51_RS16580	0.81	+0.1
3,603,173	-		ABIE51_RS16580	0.81	+0.5
3,603,173	-		ABIE51_RS16580	0.81	-0.1
3,603,173	-		ABIE51_RS16580	0.81	-0.3
3,603,308	+				+0.7
3,603,308	+				-0.1
3,603,308	+				-0.1
3,603,308	+				+0.2
3,603,309	-				-0.1
3,603,310	+				+0.0
3,603,310	+				-0.3
3,603,310	+				-0.0
3,603,310	+				-1.1
3,603,311	-				+0.5
3,603,311	-				-0.3
3,603,311	-				+0.1
3,603,311	-				+1.2
3,603,343	-				+1.3
3,603,544	+		ABIE51_RS16585	0.42	-0.4
3,603,544	+		ABIE51_RS16585	0.42	+0.0
3,603,544	+		ABIE51_RS16585	0.42	+0.3
3,603,544	+		ABIE51_RS16585	0.42	-0.5
3,603,544	+		ABIE51_RS16585	0.42	+0.2
3,603,544	+		ABIE51_RS16585	0.42	+1.5
3,603,545	-		ABIE51_RS16585	0.42	+0.1
3,603,545	-		ABIE51_RS16585	0.42	-1.1
3,603,682	+		ABIE51_RS16585	0.75	+0.6
3,603,682	+		ABIE51_RS16585	0.75	+0.2
3,603,682	+		ABIE51_RS16585	0.75	+0.4
3,603,682	+		ABIE51_RS16585	0.75	+0.2
3,603,682	+		ABIE51_RS16585	0.75	+0.9
3,603,682	+		ABIE51_RS16585	0.75	+0.7
3,603,682	+		ABIE51_RS16585	0.75	+0.2
3,603,682	+		ABIE51_RS16585	0.75	+0.6
3,603,683	-		ABIE51_RS16585	0.76	-0.1
3,603,683	-		ABIE51_RS16585	0.76	+0.8
3,603,683	-		ABIE51_RS16585	0.76	+0.1
3,603,683	-		ABIE51_RS16585	0.76	+1.2
3,603,683	-		ABIE51_RS16585	0.76	+0.2
3,603,909	+				-0.9
3,603,910	-				-0.7
3,603,915	+				-1.1
3,603,930	+				-0.2
3,603,998	+				+0.1
3,603,998	+				+0.4
3,603,998	+				-0.1
3,603,998	+				-0.6
3,603,999	-				-0.3
3,603,999	-				-0.6
3,603,999	-				+0.3
3,603,999	-				-0.0
3,604,122	+				+0.2
3,604,122	+				-0.2
3,604,122	+				+0.2
3,604,123	-				+0.1
3,604,123	-				+0.4
3,604,123	-				+0.1
3,604,123	-				-0.4
3,604,652	+		ABIE51_RS16590	0.33	+0.2
3,604,652	+		ABIE51_RS16590	0.33	+0.2
3,604,652	+		ABIE51_RS16590	0.33	-0.9
3,604,653	-		ABIE51_RS16590	0.33	+0.4
3,604,653	-		ABIE51_RS16590	0.33	-0.6
3,604,653	-		ABIE51_RS16590	0.33	-0.4
3,604,752	-		ABIE51_RS16590	0.40	-0.0