Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS13405

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
2,893,898	-				+0.5
2,893,898	-				-0.1
2,894,053	-				-0.1
2,894,214	+		ABIE51_RS13405	0.22	-4.6
2,894,214	+		ABIE51_RS13405	0.22	-2.9
2,894,215	-		ABIE51_RS13405	0.22	-2.2
2,894,215	-		ABIE51_RS13405	0.22	-2.9
2,894,376	+		ABIE51_RS13405	0.35	-0.2
2,894,682	+		ABIE51_RS13405	0.61	-3.0
2,894,740	-		ABIE51_RS13405	0.66	-2.6
2,894,865	+		ABIE51_RS13405	0.76	-2.5
2,894,865	+		ABIE51_RS13405	0.76	-2.2
2,894,865	+		ABIE51_RS13405	0.76	-1.9
2,894,865	+		ABIE51_RS13405	0.76	-2.1
2,894,948	-		ABIE51_RS13405	0.83	-2.8
2,895,239	+				-3.5
2,895,369	+		ABIE51_RS13410	0.19	-3.4
2,895,369	+		ABIE51_RS13410	0.19	-1.2
2,895,369	+		ABIE51_RS13410	0.19	-2.5
2,895,370	-		ABIE51_RS13410	0.19	-1.7
2,895,370	-		ABIE51_RS13410	0.19	-3.6
2,895,370	-		ABIE51_RS13410	0.19	-4.1
2,895,438	+		ABIE51_RS13410	0.26	-2.6
2,895,534	+		ABIE51_RS13410	0.35	-4.1
2,895,534	+		ABIE51_RS13410	0.35	-2.8
2,895,534	+		ABIE51_RS13410	0.35	-2.7
2,895,535	-		ABIE51_RS13410	0.36	-4.4
2,895,552	+		ABIE51_RS13410	0.37	-3.0
2,895,552	+		ABIE51_RS13410	0.37	-2.7
2,895,651	+		ABIE51_RS13410	0.47	-1.9
2,895,651	+		ABIE51_RS13410	0.47	-1.8
2,895,651	+		ABIE51_RS13410	0.47	-2.4
2,895,652	-		ABIE51_RS13410	0.47	-3.6
2,895,652	-		ABIE51_RS13410	0.47	-3.9
2,895,652	-		ABIE51_RS13410	0.47	-3.5
2,895,652	-		ABIE51_RS13410	0.47	-1.6
2,895,669	+		ABIE51_RS13410	0.49	-4.4
2,895,670	-		ABIE51_RS13410	0.49	-0.8
2,895,783	+		ABIE51_RS13410	0.60	-1.8
2,895,783	+		ABIE51_RS13410	0.60	-2.1
2,895,822	+		ABIE51_RS13410	0.64	-4.5
2,895,823	-		ABIE51_RS13410	0.64	-3.1
2,895,873	+		ABIE51_RS13410	0.69	-2.5