Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS09425

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
2,031,115	-				-1.2
2,031,115	-				-0.1
2,031,349	+		ABIE51_RS09420	0.28	-0.5
2,031,349	+		ABIE51_RS09420	0.28	+0.2
2,031,350	-		ABIE51_RS09420	0.28	-1.9
2,031,350	-		ABIE51_RS09420	0.28	-0.5
2,031,350	-		ABIE51_RS09420	0.28	-0.4
2,031,350	-		ABIE51_RS09420	0.28	-1.1
2,031,450	+		ABIE51_RS09420	0.40	-0.1
2,031,472	+		ABIE51_RS09420	0.42	-1.0
2,031,472	+		ABIE51_RS09420	0.42	+0.2
2,031,472	+		ABIE51_RS09420	0.42	+0.2
2,031,472	+		ABIE51_RS09420	0.42	-0.8
2,031,472	+		ABIE51_RS09420	0.42	+1.4
2,031,473	-		ABIE51_RS09420	0.42	-1.7
2,031,473	-		ABIE51_RS09420	0.42	-2.3
2,031,473	-		ABIE51_RS09420	0.42	-0.8
2,031,473	-		ABIE51_RS09420	0.42	-1.8
2,031,473	-		ABIE51_RS09420	0.42	-2.3
2,031,473	-		ABIE51_RS09420	0.42	-2.2
2,031,473	-		ABIE51_RS09420	0.42	-2.6
2,031,473	-		ABIE51_RS09420	0.42	-1.3
2,031,473	-		ABIE51_RS09420	0.42	-1.8
2,031,473	-		ABIE51_RS09420	0.42	-0.6
2,031,473	-		ABIE51_RS09420	0.42	-1.8
2,031,473	-		ABIE51_RS09420	0.42	-1.9
2,031,523	+		ABIE51_RS09420	0.48	-0.2
2,031,523	+		ABIE51_RS09420	0.48	-0.2
2,031,523	+		ABIE51_RS09420	0.48	+0.7
2,031,523	+		ABIE51_RS09420	0.48	-0.9
2,031,523	+		ABIE51_RS09420	0.48	+0.4
2,031,523	+		ABIE51_RS09420	0.48	-0.2
2,031,523	+		ABIE51_RS09420	0.48	-1.1
2,031,523	+		ABIE51_RS09420	0.48	+1.0
2,031,523	+		ABIE51_RS09420	0.48	-0.1
2,031,524	-		ABIE51_RS09420	0.49	-1.9
2,031,524	-		ABIE51_RS09420	0.49	-1.3
2,031,524	-		ABIE51_RS09420	0.49	-0.9
2,031,524	-		ABIE51_RS09420	0.49	-1.1
2,031,524	-		ABIE51_RS09420	0.49	-2.4
2,031,524	-		ABIE51_RS09420	0.49	-2.4
2,031,524	-		ABIE51_RS09420	0.49	-1.0
2,031,524	-		ABIE51_RS09420	0.49	-2.5
2,031,524	-		ABIE51_RS09420	0.49	-0.8
2,031,524	-		ABIE51_RS09420	0.49	-1.7
2,031,524	-		ABIE51_RS09420	0.49	-1.1
2,031,524	-		ABIE51_RS09420	0.49	-3.0
2,031,524	-		ABIE51_RS09420	0.49	-1.7
2,031,524	-		ABIE51_RS09420	0.49	-1.0
2,031,524	-		ABIE51_RS09420	0.49	-2.3
2,031,524	-		ABIE51_RS09420	0.49	-1.7
2,031,524	-		ABIE51_RS09420	0.49	-2.8
2,031,524	-		ABIE51_RS09420	0.49	-2.0
2,031,524	-		ABIE51_RS09420	0.49	-1.3
2,031,524	-		ABIE51_RS09420	0.49	-2.2
2,031,601	+		ABIE51_RS09420	0.58	+0.5
2,031,601	+		ABIE51_RS09420	0.58	+0.2
2,031,601	+		ABIE51_RS09420	0.58	+0.2
2,031,601	+		ABIE51_RS09420	0.58	+0.5
2,031,601	+		ABIE51_RS09420	0.58	-0.2
2,031,601	+		ABIE51_RS09420	0.58	+0.5
2,031,601	+		ABIE51_RS09420	0.58	-0.9
2,031,602	-		ABIE51_RS09420	0.58	-1.0
2,031,602	-		ABIE51_RS09420	0.58	-1.7
2,031,602	-		ABIE51_RS09420	0.58	-2.5
2,031,602	-		ABIE51_RS09420	0.58	-2.5
2,031,602	-		ABIE51_RS09420	0.58	-1.6
2,031,602	-		ABIE51_RS09420	0.58	-2.2
2,031,602	-		ABIE51_RS09420	0.58	-1.6
2,031,602	-		ABIE51_RS09420	0.58	-3.9
2,031,602	-		ABIE51_RS09420	0.58	-2.9
2,031,602	-		ABIE51_RS09420	0.58	-1.3
2,031,758	+		ABIE51_RS09420	0.76	-0.3
2,031,883	+				-0.1
2,031,883	+				+1.5
2,031,883	+				+0.5
2,031,883	+				-0.0
2,031,883	+				+0.2
2,031,883	+				+1.3
2,031,883	+				+0.3
2,031,883	+				+1.2
2,031,884	-				-2.0
2,031,884	-				-2.6
2,031,884	-				+0.7
2,031,884	-				-1.9
2,031,884	-				-3.7
2,031,884	-				-1.0
2,032,599	+		ABIE51_RS09425	0.81	+0.3
2,032,599	+		ABIE51_RS09425	0.81	-1.3
2,032,599	+		ABIE51_RS09425	0.81	-1.0
2,032,599	+		ABIE51_RS09425	0.81	-1.7
2,032,600	-		ABIE51_RS09425	0.81	+0.3
2,032,600	-		ABIE51_RS09425	0.81	-0.3
2,032,600	-		ABIE51_RS09425	0.81	+0.3
2,032,600	-		ABIE51_RS09425	0.81	+1.3
2,032,715	+				-2.0
2,032,715	+				-2.4
2,032,715	+				-1.3
2,032,715	+				-1.0
2,032,716	-				-1.3
2,032,716	-				-3.3
2,032,716	-				-0.7
2,032,716	-				-2.0
2,032,716	-				-1.5
2,032,720	+				-1.5
2,032,720	+				-0.3
2,032,720	+				+0.9
2,032,721	-				+0.3
2,032,721	-				+0.7
2,032,763	-				-1.2
2,032,808	+				+0.4
2,032,808	+				-0.3
2,032,808	+				+0.3
2,032,808	+				-0.6
2,032,808	+				+0.6
2,032,808	+				+0.4
2,032,808	+				+0.5
2,032,808	+				-0.2
2,032,808	+				-0.7
2,032,809	-				-3.3
2,032,809	-				-1.7
2,032,809	-				-1.5
2,032,809	-				-3.6
2,032,809	-				-1.9
2,032,809	-				-3.0
2,032,809	-				-3.3
2,032,809	-				-3.0
2,032,855	+				-0.1
2,033,034	+		ABIE51_RS09430	0.27	-2.6
2,033,034	+		ABIE51_RS09430	0.27	-1.6
2,033,034	+		ABIE51_RS09430	0.27	-2.8
2,033,035	-		ABIE51_RS09430	0.28	-1.5
2,033,115	+		ABIE51_RS09430	0.40	-0.3
2,033,115	+		ABIE51_RS09430	0.40	-1.2
2,033,116	-		ABIE51_RS09430	0.40	-4.0
2,033,116	-		ABIE51_RS09430	0.40	-2.3
2,033,382	+		ABIE51_RS09430	0.82	-1.2
2,033,382	+		ABIE51_RS09430	0.82	-1.4
2,033,382	+		ABIE51_RS09430	0.82	-0.5
2,033,382	+		ABIE51_RS09430	0.82	-0.6
2,033,383	-		ABIE51_RS09430	0.83	-1.4
2,033,383	-		ABIE51_RS09430	0.83	-1.0