Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS08780

Experiment: Ying_OrganicAcid7 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_OrganicAcid7 rep A; time point 2
1,863,160	+				+2.3
1,863,465	+		ABIE51_RS08780	0.14	+0.5
1,863,465	+		ABIE51_RS08780	0.14	-0.8
1,863,870	+		ABIE51_RS08780	0.54	-1.8
1,863,870	+		ABIE51_RS08780	0.54	-1.0
1,863,870	+		ABIE51_RS08780	0.54	-0.7
1,863,870	+		ABIE51_RS08780	0.54	+0.0
1,863,870	+		ABIE51_RS08780	0.54	-2.2
1,863,870	+		ABIE51_RS08780	0.54	-1.7
1,863,870	+		ABIE51_RS08780	0.54	-2.3
1,863,918	-		ABIE51_RS08780	0.59	-3.1
1,863,918	-		ABIE51_RS08780	0.59	-2.0
1,863,918	-		ABIE51_RS08780	0.59	-1.4
1,864,035	+		ABIE51_RS08780	0.70	-2.5
1,864,036	-		ABIE51_RS08780	0.70	-3.2
1,864,074	+		ABIE51_RS08780	0.74	-3.4
1,864,074	+		ABIE51_RS08780	0.74	-1.2
1,864,074	+		ABIE51_RS08780	0.74	-3.0
1,864,075	-		ABIE51_RS08780	0.74	-2.1
1,864,075	-		ABIE51_RS08780	0.74	-2.6
1,864,422	+				-0.1
1,864,422	+				+0.3
1,864,422	+				+0.1
1,864,531	+				-2.0
1,864,531	+				-3.8
1,864,531	+				-1.0
1,864,531	+				-2.2
1,864,532	-				-1.0
1,864,921	+		ABIE51_RS08785	0.52	-4.1
1,864,921	+		ABIE51_RS08785	0.52	-1.4
1,864,921	+		ABIE51_RS08785	0.52	-0.5
1,864,921	+		ABIE51_RS08785	0.52	-2.6
1,864,922	-		ABIE51_RS08785	0.52	-3.0
1,864,922	-		ABIE51_RS08785	0.52	-3.0
1,865,041	+		ABIE51_RS08785	0.65	-1.7
1,865,041	+		ABIE51_RS08785	0.65	-2.3
1,865,041	+		ABIE51_RS08785	0.65	-2.6
1,865,042	-		ABIE51_RS08785	0.65	-1.0
1,865,042	-		ABIE51_RS08785	0.65	-0.5
1,865,086	+		ABIE51_RS08785	0.70	-0.9
1,865,086	+		ABIE51_RS08785	0.70	-2.0
1,865,086	+		ABIE51_RS08785	0.70	-3.2
1,865,086	+		ABIE51_RS08785	0.70	-1.7
1,865,086	+		ABIE51_RS08785	0.70	-2.4
1,865,087	-		ABIE51_RS08785	0.70	-2.2
1,865,087	-		ABIE51_RS08785	0.70	-2.5
1,865,087	-		ABIE51_RS08785	0.70	-3.6
1,865,087	-		ABIE51_RS08785	0.70	-1.5
1,865,095	+		ABIE51_RS08785	0.71	-2.3
1,865,096	-		ABIE51_RS08785	0.71	-1.0
1,865,158	+		ABIE51_RS08785	0.78	-2.1
1,865,158	+		ABIE51_RS08785	0.78	-1.8
1,865,158	+		ABIE51_RS08785	0.78	-1.5
1,865,158	+		ABIE51_RS08785	0.78	-3.4
1,865,158	+		ABIE51_RS08785	0.78	-1.7
1,865,158	+		ABIE51_RS08785	0.78	-2.3
1,865,159	-		ABIE51_RS08785	0.78	-2.4
1,865,224	+		ABIE51_RS08785	0.85	-1.0
1,865,224	+		ABIE51_RS08785	0.85	-4.0
1,865,224	+		ABIE51_RS08785	0.85	-2.8
1,865,224	+		ABIE51_RS08785	0.85	-1.9
1,865,224	+		ABIE51_RS08785	0.85	-3.3
1,865,224	+		ABIE51_RS08785	0.85	-1.5
1,865,224	+		ABIE51_RS08785	0.85	-1.8
1,865,224	+		ABIE51_RS08785	0.85	-2.0
1,865,224	+		ABIE51_RS08785	0.85	-0.5
1,865,224	+		ABIE51_RS08785	0.85	-3.1
1,865,224	+		ABIE51_RS08785	0.85	-1.4
1,865,224	+		ABIE51_RS08785	0.85	-1.6
1,865,225	-		ABIE51_RS08785	0.85	-1.0
1,865,225	-		ABIE51_RS08785	0.85	-2.4
1,865,225	-		ABIE51_RS08785	0.85	-1.6
1,865,225	-		ABIE51_RS08785	0.85	-2.9
1,865,225	-		ABIE51_RS08785	0.85	-0.3
1,865,225	-		ABIE51_RS08785	0.85	-1.6
1,865,225	-		ABIE51_RS08785	0.85	-0.3
1,865,225	-		ABIE51_RS08785	0.85	-0.9