Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS16055

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
3,478,720	-		ABIE51_RS16050	0.61	-0.2
3,478,865	+		ABIE51_RS16050	0.73	+0.0
3,478,865	+		ABIE51_RS16050	0.73	+0.1
3,478,866	-		ABIE51_RS16050	0.74	+1.2
3,479,307	-				+0.9
3,479,411	+		ABIE51_RS16055	0.10	+0.2
3,479,411	+		ABIE51_RS16055	0.10	+0.3
3,479,412	-		ABIE51_RS16055	0.10	-0.4
3,479,412	-		ABIE51_RS16055	0.10	-1.0
3,479,438	+		ABIE51_RS16055	0.13	-0.0
3,479,439	-		ABIE51_RS16055	0.13	-1.0
3,479,439	-		ABIE51_RS16055	0.13	-0.6
3,479,439	-		ABIE51_RS16055	0.13	-0.8
3,479,747	+		ABIE51_RS16055	0.43	-1.2
3,479,747	+		ABIE51_RS16055	0.43	+0.3
3,479,747	+		ABIE51_RS16055	0.43	+0.4
3,479,748	-		ABIE51_RS16055	0.43	-0.4
3,479,748	-		ABIE51_RS16055	0.43	+0.7
3,479,748	-		ABIE51_RS16055	0.43	+0.7
3,479,748	-		ABIE51_RS16055	0.43	-0.0
3,479,748	-		ABIE51_RS16055	0.43	+0.1
3,479,888	+		ABIE51_RS16055	0.56	-0.2
3,479,889	-		ABIE51_RS16055	0.56	+0.1
3,479,889	-		ABIE51_RS16055	0.56	-0.1
3,480,156	-		ABIE51_RS16055	0.82	+0.7
3,480,156	-		ABIE51_RS16055	0.82	-0.3
3,480,156	-		ABIE51_RS16055	0.82	+0.3
3,480,189	-		ABIE51_RS16055	0.85	+0.2
3,480,189	-		ABIE51_RS16055	0.85	-0.3
3,480,189	-		ABIE51_RS16055	0.85	-0.1
3,480,189	-		ABIE51_RS16055	0.85	+0.9
3,480,189	-		ABIE51_RS16055	0.85	-0.1
3,480,401	+				-0.1
3,480,401	+				-0.3
3,480,402	-				-0.3
3,480,402	-				-0.4
3,480,402	-				-0.3
3,480,402	-				-0.2
3,480,403	+				+0.2
3,480,403	+				-0.2
3,480,403	+				+0.6
3,480,403	+				-0.2
3,480,403	+				-0.5
3,480,403	+				-0.2
3,480,404	-				-0.8
3,480,404	-				+0.1
3,480,404	-				-0.9
3,480,404	-				-0.4
3,480,479	+				+0.1
3,480,479	+				-0.2
3,480,480	-				-0.3
3,480,480	-				-0.7
3,480,480	-				-0.6
3,480,480	-				-0.2
3,480,480	-				+0.5
3,480,480	-				-0.3
3,480,480	-				-0.2
3,480,612	+		ABIE51_RS16060	0.23	+1.3
3,480,612	+		ABIE51_RS16060	0.23	-0.9
3,480,612	+		ABIE51_RS16060	0.23	-0.2
3,480,613	-		ABIE51_RS16060	0.23	+0.1
3,480,613	-		ABIE51_RS16060	0.23	+0.1
3,480,613	-		ABIE51_RS16060	0.23	-0.2
3,481,053	+		ABIE51_RS16060	0.88	-0.5
3,481,053	+		ABIE51_RS16060	0.88	-0.6
3,481,054	-		ABIE51_RS16060	0.88	-0.3
3,481,054	-		ABIE51_RS16060	0.88	-0.2
3,481,054	-		ABIE51_RS16060	0.88	-0.8
3,481,134	+				-0.2
3,481,134	+				-0.0
3,481,134	+				+1.0
3,481,161	+				+0.2
3,481,162	-				-0.2