Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15335

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
3,328,989	+		ABIE51_RS15330	0.74	-0.9
3,328,990	-		ABIE51_RS15330	0.74	-0.0
3,329,020	-		ABIE51_RS15330	0.75	+0.2
3,329,020	-		ABIE51_RS15330	0.75	+0.8
3,329,095	-		ABIE51_RS15330	0.77	-0.5
3,329,097	+		ABIE51_RS15330	0.77	+0.5
3,329,097	+		ABIE51_RS15330	0.77	+0.3
3,329,098	-		ABIE51_RS15330	0.77	-0.2
3,329,148	+		ABIE51_RS15330	0.78	-0.1
3,329,149	-		ABIE51_RS15330	0.78	-0.6
3,329,149	-		ABIE51_RS15330	0.78	-0.2
3,329,154	+		ABIE51_RS15330	0.79	-0.4
3,329,235	+		ABIE51_RS15330	0.81	-0.4
3,329,235	+		ABIE51_RS15330	0.81	+0.2
3,329,236	-		ABIE51_RS15330	0.81	-0.7
3,329,236	-		ABIE51_RS15330	0.81	-0.6
3,329,236	-		ABIE51_RS15330	0.81	-0.3
3,329,310	+		ABIE51_RS15330	0.83	-0.2
3,329,310	+		ABIE51_RS15330	0.83	+0.6
3,329,310	+		ABIE51_RS15330	0.83	-0.8
3,329,310	+		ABIE51_RS15330	0.83	-0.1
3,329,311	-		ABIE51_RS15330	0.83	+0.2
3,329,339	-		ABIE51_RS15330	0.83	-1.5
3,329,377	-		ABIE51_RS15330	0.84	-0.4
3,329,377	-		ABIE51_RS15330	0.84	-0.4
3,329,411	+		ABIE51_RS15330	0.85	-0.4
3,329,442	+		ABIE51_RS15330	0.86	+0.8
3,329,442	+		ABIE51_RS15330	0.86	+0.2
3,329,442	+		ABIE51_RS15330	0.86	+2.9
3,329,446	-		ABIE51_RS15330	0.86	-0.3
3,329,550	+		ABIE51_RS15330	0.89	-0.2
3,329,550	+		ABIE51_RS15330	0.89	-0.6
3,329,551	-		ABIE51_RS15330	0.89	-0.6
3,329,551	-		ABIE51_RS15330	0.89	-0.0
3,329,568	+		ABIE51_RS15330	0.90	-0.6
3,329,569	-		ABIE51_RS15330	0.90	-0.7
3,329,571	+		ABIE51_RS15330	0.90	-0.8
3,329,571	+		ABIE51_RS15330	0.90	-0.3
3,329,572	-		ABIE51_RS15330	0.90	-0.6
3,329,607	+				+0.1
3,329,634	+				-0.5
3,329,634	+				-0.0
3,329,635	-				-0.0
3,329,635	-				-1.0
3,329,635	-				-0.4
3,329,664	+				+0.0
3,329,664	+				-0.3
3,329,665	-				-1.0
3,329,665	-				+1.1
3,329,665	-				+0.4
3,329,670	+				-0.4
3,329,670	+				+0.3
3,329,689	+				-0.3
3,329,689	+				+0.6
3,329,690	-				-0.2
3,329,840	-				-0.8
3,329,840	-				-0.5
3,329,840	-				+1.7
3,329,855	+				+0.1
3,329,888	+				+0.1
3,329,927	+				+0.5
3,329,966	+				-0.5
3,329,966	+				-0.2
3,329,967	-				+0.1
3,329,976	-				-0.8
3,330,101	+		ABIE51_RS15335	0.25	-0.3
3,330,422	+		ABIE51_RS15335	0.89	+0.4
3,330,422	+		ABIE51_RS15335	0.89	-0.6
3,330,423	-		ABIE51_RS15335	0.90	-0.8
3,330,458	+				-0.3
3,330,528	+				-0.5
3,330,540	+				-0.7
3,330,540	+				-0.5
3,330,541	-				-0.5
3,330,593	+				-0.4
3,330,594	-				+0.6
3,330,793	-		ABIE51_RS15340	0.24	-0.9
3,330,911	-		ABIE51_RS15340	0.33	-0.0
3,330,960	+		ABIE51_RS15340	0.37	-1.1
3,330,961	-		ABIE51_RS15340	0.37	-0.3
3,331,103	-		ABIE51_RS15340	0.48	-0.3
3,331,158	+		ABIE51_RS15340	0.53	+0.0
3,331,158	+		ABIE51_RS15340	0.53	-0.7
3,331,158	+		ABIE51_RS15340	0.53	+0.2
3,331,158	+		ABIE51_RS15340	0.53	-0.1
3,331,159	-		ABIE51_RS15340	0.53	+0.4
3,331,159	-		ABIE51_RS15340	0.53	-1.0
3,331,179	+		ABIE51_RS15340	0.54	+0.9
3,331,180	-		ABIE51_RS15340	0.54	+0.9
3,331,180	-		ABIE51_RS15340	0.54	+0.0
3,331,180	-		ABIE51_RS15340	0.54	-0.1
3,331,180	-		ABIE51_RS15340	0.54	-0.4
3,331,180	-		ABIE51_RS15340	0.54	+0.2
3,331,180	-		ABIE51_RS15340	0.54	-0.6
3,331,234	-		ABIE51_RS15340	0.58	-0.6