Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS08955

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
1,914,997	+		ABIE51_RS08945	0.21	+1.0
1,914,997	+		ABIE51_RS08945	0.21	+0.7
1,914,998	-		ABIE51_RS08945	0.21	+0.6
1,915,246	+		ABIE51_RS08945	0.49	-0.7
1,915,246	+		ABIE51_RS08945	0.49	+0.2
1,915,246	+		ABIE51_RS08945	0.49	+0.2
1,915,247	-		ABIE51_RS08945	0.49	+0.8
1,915,247	-		ABIE51_RS08945	0.49	+0.6
1,915,247	-		ABIE51_RS08945	0.49	-0.2
1,915,247	-		ABIE51_RS08945	0.49	+0.3
1,915,247	-		ABIE51_RS08945	0.49	+0.4
1,915,257	+		ABIE51_RS08945	0.50	-0.9
1,915,258	-		ABIE51_RS08945	0.50	+0.3
1,915,381	+		ABIE51_RS08945	0.64	+0.2
1,915,381	+		ABIE51_RS08945	0.64	+0.2
1,915,660	+				+0.2
1,915,661	-				+2.0
1,915,661	-				+1.4
1,915,722	-				+0.3
1,916,033	+		ABIE51_RS08955	0.17	-0.3
1,916,033	+		ABIE51_RS08955	0.17	-0.4
1,916,033	+		ABIE51_RS08955	0.17	-2.4
1,916,033	+		ABIE51_RS08955	0.17	+0.3
1,916,033	+		ABIE51_RS08955	0.17	+0.5
1,916,334	+				+0.1
1,916,334	+				+0.5
1,916,334	+				+0.0
1,916,334	+				+0.2
1,916,334	+				+0.5
1,916,334	+				-0.6
1,916,334	+				-0.1
1,916,334	+				-0.2
1,916,334	+				-0.0
1,916,335	-				+0.4
1,916,335	-				+0.0
1,916,335	-				+0.3
1,916,335	-				-0.5
1,916,335	-				+0.3
1,916,335	-				+0.2
1,916,335	-				+0.3
1,916,335	-				-0.3
1,916,335	-				+0.7
1,916,335	-				+0.6
1,916,335	-				-0.0
1,916,335	-				+0.1
1,916,335	-				-0.2
1,916,335	-				-0.6
1,916,335	-				+0.2
1,916,335	-				+0.1
1,916,364	-				-0.5
1,916,364	-				+0.5
1,916,364	-				-0.2
1,916,442	+				-1.9
1,916,442	+				-2.6
1,916,442	+				-1.2
1,916,442	+				-2.1
1,916,443	-				-2.0
1,916,443	-				-1.5
1,916,443	-				-1.7
1,916,443	-				-0.4
1,916,443	-				-0.9
1,916,443	-				-2.4
1,916,844	-		ABIE51_RS08960	0.42	-2.2
1,916,844	-		ABIE51_RS08960	0.42	-2.7
1,917,293	+		ABIE51_RS08960	0.87	-0.4
1,917,294	-		ABIE51_RS08960	0.88	-1.8
1,917,294	-		ABIE51_RS08960	0.88	-2.3
1,917,294	-		ABIE51_RS08960	0.88	-0.9
1,917,294	-		ABIE51_RS08960	0.88	-2.8