Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS05605

Experiment: Ying_AminoAcid20 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 2
1,207,714	+		ABIE51_RS05600	0.65	+0.1
1,207,801	+		ABIE51_RS05600	0.70	+0.8
1,207,801	+		ABIE51_RS05600	0.70	+0.7
1,207,801	+		ABIE51_RS05600	0.70	+0.7
1,207,801	+		ABIE51_RS05600	0.70	-0.1
1,207,801	+		ABIE51_RS05600	0.70	-0.5
1,207,802	-		ABIE51_RS05600	0.70	+0.2
1,207,802	-		ABIE51_RS05600	0.70	+0.2
1,207,802	-		ABIE51_RS05600	0.70	+0.2
1,207,810	+		ABIE51_RS05600	0.70	+0.5
1,207,810	+		ABIE51_RS05600	0.70	+0.2
1,207,810	+		ABIE51_RS05600	0.70	+0.3
1,207,811	-		ABIE51_RS05600	0.70	+0.3
1,208,089	+		ABIE51_RS05600	0.86	+0.9
1,208,090	+		ABIE51_RS05600	0.86	+0.1
1,208,090	-		ABIE51_RS05600	0.86	+0.7
1,208,200	+				+1.9
1,208,200	+				-0.7
1,208,201	-				-0.1
1,208,270	-				+0.1
1,208,270	-				+0.6
1,208,270	-				+2.1
1,208,326	+				-0.1
1,208,327	-				-0.1
1,208,360	-				+0.8
1,208,360	-				+0.4
1,208,378	-				-0.6
1,208,378	-				-0.1
1,208,378	-				+0.0
1,208,483	-				-0.3
1,208,530	+		ABIE51_RS05605	0.16	+0.2
1,208,531	-		ABIE51_RS05605	0.16	+1.2
1,208,531	-		ABIE51_RS05605	0.16	-0.0
1,208,531	-		ABIE51_RS05605	0.16	+0.8
1,208,662	+		ABIE51_RS05605	0.84	+1.0
1,208,700	+				+0.1
1,208,700	+				+1.1
1,208,700	+				+2.1
1,208,701	-				+0.4
1,208,701	-				+1.9
1,208,701	-				+0.6
1,208,701	-				+0.9
1,208,701	-				+0.0
1,208,817	+				+0.3
1,208,817	+				-0.2
1,209,333	-		ABIE51_RS05610	0.35	+0.2
1,209,599	+		ABIE51_RS05610	0.56	-0.0
1,209,641	+		ABIE51_RS05610	0.60	+0.3
1,209,642	-		ABIE51_RS05610	0.60	+1.1
1,209,642	-		ABIE51_RS05610	0.60	+0.0
1,209,656	+		ABIE51_RS05610	0.61	+0.6
1,209,657	-		ABIE51_RS05610	0.61	+0.0