Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS15185

Experiment: Ying_AminoAcid20 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 2
3,297,172	+		ABIE51_RS15180	0.59	+0.1
3,297,172	+		ABIE51_RS15180	0.59	+0.3
3,297,173	-		ABIE51_RS15180	0.59	+0.2
3,297,173	-		ABIE51_RS15180	0.59	-0.7
3,297,415	+		ABIE51_RS15180	0.81	-0.1
3,299,740	+				-0.0
3,299,740	+				+0.5
3,299,741	-				+0.6
3,299,800	+				-0.1
3,299,800	+				+0.0
3,299,822	+				+1.3
3,299,822	+				-1.0
3,299,822	+				-0.1
3,299,822	+				+1.0
3,299,880	+				-0.0
3,299,912	+				+0.2
3,299,913	-				+0.3
3,299,978	+				-0.2
3,299,978	+				-0.2
3,299,978	+				+0.3
3,300,186	+		ABIE51_RS15190	0.26	+0.6
3,300,186	+		ABIE51_RS15190	0.26	+0.7
3,300,187	-		ABIE51_RS15190	0.26	+0.6
3,300,187	-		ABIE51_RS15190	0.26	+0.6
3,300,188	+		ABIE51_RS15190	0.26	-0.5
3,300,188	+		ABIE51_RS15190	0.26	-0.2
3,300,188	+		ABIE51_RS15190	0.26	+0.4
3,300,188	+		ABIE51_RS15190	0.26	+0.3
3,300,189	-		ABIE51_RS15190	0.26	+1.6
3,300,500	+		ABIE51_RS15190	0.55	+0.0
3,300,501	-		ABIE51_RS15190	0.55	-0.0
3,300,530	+		ABIE51_RS15190	0.58	+0.6
3,300,530	+		ABIE51_RS15190	0.58	-0.2
3,300,531	-		ABIE51_RS15190	0.58	+0.3
3,300,531	-		ABIE51_RS15190	0.58	-0.3
3,300,531	-		ABIE51_RS15190	0.58	+0.1
3,300,531	-		ABIE51_RS15190	0.58	-1.0
3,300,531	-		ABIE51_RS15190	0.58	-0.1
3,300,531	-		ABIE51_RS15190	0.58	+0.4
3,300,560	+		ABIE51_RS15190	0.61	-0.2
3,300,560	+		ABIE51_RS15190	0.61	+0.3
3,300,560	+		ABIE51_RS15190	0.61	+0.1
3,300,560	+		ABIE51_RS15190	0.61	+0.1
3,300,560	+		ABIE51_RS15190	0.61	+0.9
3,300,560	+		ABIE51_RS15190	0.61	+0.2
3,300,561	-		ABIE51_RS15190	0.61	+1.0
3,300,561	-		ABIE51_RS15190	0.61	+0.2
3,300,561	-		ABIE51_RS15190	0.61	+0.2
3,300,561	-		ABIE51_RS15190	0.61	+0.5