Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS14215

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
3,067,926	-		ABIE51_RS14205	0.45	+0.1
3,067,926	-		ABIE51_RS14205	0.45	+0.7
3,067,926	-		ABIE51_RS14205	0.45	-0.0
3,067,926	-		ABIE51_RS14205	0.45	+0.6
3,068,012	+		ABIE51_RS14205	0.66	+0.3
3,068,012	+		ABIE51_RS14205	0.66	+0.3
3,068,012	+		ABIE51_RS14205	0.66	-0.1
3,068,012	+		ABIE51_RS14205	0.66	-0.0
3,068,012	+		ABIE51_RS14205	0.66	-0.4
3,068,013	-		ABIE51_RS14205	0.67	+0.2
3,068,013	-		ABIE51_RS14205	0.67	+0.1
3,068,180	-				-0.8
3,068,180	-				+0.1
3,068,258	+				-0.3
3,068,258	+				+0.3
3,068,258	+				+0.6
3,068,259	-				+0.7
3,068,474	+		ABIE51_RS14210	0.72	-0.4
3,068,475	-		ABIE51_RS14210	0.72	-0.4
3,068,475	-		ABIE51_RS14210	0.72	+0.5
3,068,475	-		ABIE51_RS14210	0.72	+0.3
3,068,495	+		ABIE51_RS14210	0.79	+0.1
3,068,495	+		ABIE51_RS14210	0.79	+1.3
3,068,495	+		ABIE51_RS14210	0.79	+0.0
3,068,495	+		ABIE51_RS14210	0.79	+0.6
3,068,495	+		ABIE51_RS14210	0.79	+0.4
3,068,495	+		ABIE51_RS14210	0.79	+0.9
3,068,495	+		ABIE51_RS14210	0.79	-0.3
3,068,495	+		ABIE51_RS14210	0.79	-0.7
3,068,496	-		ABIE51_RS14210	0.79	+0.5
3,068,496	-		ABIE51_RS14210	0.79	-0.4
3,068,496	-		ABIE51_RS14210	0.79	+0.7
3,068,496	-		ABIE51_RS14210	0.79	+0.2
3,068,496	-		ABIE51_RS14210	0.79	+0.3
3,068,496	-		ABIE51_RS14210	0.79	-0.1
3,068,496	-		ABIE51_RS14210	0.79	+0.1
3,068,601	+				+0.2
3,068,601	+				-0.1
3,068,602	-				+0.1
3,068,602	-				-0.1
3,068,686	+				-0.4
3,068,686	+				+0.1
3,068,687	-				+0.2
3,068,698	+				+0.1
3,068,698	+				+1.0
3,068,699	-				+0.4
3,068,699	-				-0.3
3,068,924	+				-0.6
3,068,925	-				-1.6
3,068,925	-				-1.5
3,068,957	+		ABIE51_RS14215	0.10	-1.0
3,068,958	-		ABIE51_RS14215	0.10	-1.1
3,068,958	-		ABIE51_RS14215	0.10	-1.0
3,068,963	+		ABIE51_RS14215	0.11	-1.3
3,068,963	+		ABIE51_RS14215	0.11	-1.1
3,068,964	-		ABIE51_RS14215	0.11	-0.6
3,069,107	+		ABIE51_RS14215	0.19	-0.9
3,069,107	+		ABIE51_RS14215	0.19	-0.9
3,069,108	-		ABIE51_RS14215	0.19	-0.8
3,069,108	-		ABIE51_RS14215	0.19	-0.9
3,069,108	-		ABIE51_RS14215	0.19	-2.4
3,069,371	+		ABIE51_RS14215	0.35	-0.2
3,069,371	+		ABIE51_RS14215	0.35	-1.8
3,069,371	+		ABIE51_RS14215	0.35	-0.5
3,069,371	+		ABIE51_RS14215	0.35	-0.5
3,069,371	+		ABIE51_RS14215	0.35	-0.5
3,069,372	-		ABIE51_RS14215	0.35	-1.0
3,069,372	-		ABIE51_RS14215	0.35	-0.8
3,069,372	-		ABIE51_RS14215	0.35	-1.0
3,069,372	-		ABIE51_RS14215	0.35	-0.9
3,069,372	-		ABIE51_RS14215	0.35	-0.9
3,069,372	-		ABIE51_RS14215	0.35	-1.1
3,069,434	+		ABIE51_RS14215	0.39	-0.8
3,069,434	+		ABIE51_RS14215	0.39	-0.8
3,069,435	-		ABIE51_RS14215	0.39	-0.7
3,069,435	-		ABIE51_RS14215	0.39	+0.3
3,069,503	+		ABIE51_RS14215	0.43	-0.6
3,069,504	-		ABIE51_RS14215	0.43	-0.8
3,069,773	+		ABIE51_RS14215	0.60	-0.4
3,069,834	-		ABIE51_RS14215	0.63	-1.2
3,069,834	-		ABIE51_RS14215	0.63	-1.4
3,069,834	-		ABIE51_RS14215	0.63	-0.6
3,069,879	-		ABIE51_RS14215	0.66	-1.3
3,069,890	+		ABIE51_RS14215	0.67	-0.6
3,069,890	+		ABIE51_RS14215	0.67	-0.9
3,069,890	+		ABIE51_RS14215	0.67	-1.5
3,069,891	-		ABIE51_RS14215	0.67	-0.4
3,069,891	-		ABIE51_RS14215	0.67	-1.8
3,070,088	+		ABIE51_RS14215	0.79	-1.3
3,070,089	-		ABIE51_RS14215	0.79	-0.7
3,070,089	-		ABIE51_RS14215	0.79	-1.1
3,070,250	+		ABIE51_RS14215	0.89	+0.1
3,070,265	+		ABIE51_RS14215	0.89	-0.7
3,070,266	-		ABIE51_RS14215	0.90	-1.0
3,070,266	-		ABIE51_RS14215	0.90	-0.9
3,070,334	+				-1.2
3,070,334	+				-0.3
3,070,334	+				-1.3
3,070,334	+				-1.0
3,070,334	+				-0.8
3,070,335	-				-1.1
3,070,335	-				-0.5
3,070,335	-				-0.9
3,070,335	-				-1.2
3,070,335	-				-1.0
3,070,335	-				-0.9
3,070,337	+				-3.4
3,070,337	+				-0.5
3,070,337	+				-1.1
3,070,338	-				-1.1
3,070,338	-				-0.6
3,070,338	-				-1.5
3,070,338	-				-0.7
3,070,338	-				-1.1
3,070,338	-				-1.2
3,070,338	-				-1.6
3,070,338	-				-1.1
3,070,436	+				+1.6
3,070,437	-				+0.1
3,070,437	-				+0.5
3,070,437	-				+0.2
3,070,437	-				+0.5
3,070,437	-				+0.1
3,070,437	-				+0.5
3,070,492	+				+0.5
3,070,492	+				+0.0
3,070,492	+				+0.0
3,070,493	-				-0.3
3,070,493	-				-0.4
3,070,497	+				-0.1
3,070,498	-				+1.7
3,070,498	-				-0.2
3,070,498	-				+0.2
3,070,498	-				+0.5
3,070,498	-				-0.1
3,070,498	-				+1.0
3,070,622	-		ABIE51_RS14220	0.11	+0.8
3,070,622	-		ABIE51_RS14220	0.11	+0.4
3,070,846	+		ABIE51_RS14220	0.43	-0.4
3,070,846	+		ABIE51_RS14220	0.43	+0.2
3,070,846	+		ABIE51_RS14220	0.43	+0.3
3,070,846	+		ABIE51_RS14220	0.43	-0.2
3,070,847	-		ABIE51_RS14220	0.43	+0.6
3,070,847	-		ABIE51_RS14220	0.43	-0.4
3,071,075	-		ABIE51_RS14220	0.75	-0.2
3,071,075	-		ABIE51_RS14220	0.75	-0.2
3,071,119	+		ABIE51_RS14220	0.81	-0.2
3,071,119	+		ABIE51_RS14220	0.81	-0.5
3,071,119	+		ABIE51_RS14220	0.81	-0.5
3,071,119	+		ABIE51_RS14220	0.81	-0.7
3,071,119	+		ABIE51_RS14220	0.81	-0.1
3,071,120	-		ABIE51_RS14220	0.81	+0.1
3,071,120	-		ABIE51_RS14220	0.81	+0.7
3,071,120	-		ABIE51_RS14220	0.81	-0.9
3,071,120	-		ABIE51_RS14220	0.81	+0.0