Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS13110

Experiment: Ying_sugar7 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep C; time point 2
2,825,942	+		ABIE51_RS13105	0.89	+0.7
2,825,942	+		ABIE51_RS13105	0.89	+0.4
2,825,942	+		ABIE51_RS13105	0.89	-0.4
2,825,942	+		ABIE51_RS13105	0.89	-0.3
2,825,943	-		ABIE51_RS13105	0.89	+0.3
2,825,943	-		ABIE51_RS13105	0.89	-0.1
2,825,943	-		ABIE51_RS13105	0.89	+0.1
2,825,960	+		ABIE51_RS13105	0.89	-0.6
2,826,062	+				-0.3
2,826,062	+				+0.2
2,826,062	+				-0.5
2,826,062	+				+0.6
2,826,062	+				+0.1
2,826,063	-				-0.2
2,826,063	-				+0.2
2,826,063	-				-0.6
2,826,063	-				-0.3
2,826,063	-				+1.1
2,826,071	+				+0.7
2,826,071	+				-0.4
2,826,071	+				-0.3
2,826,072	-				+0.8
2,826,370	-				-0.4
2,826,374	+				+0.3
2,826,389	+				-0.0
2,826,463	-				+0.1
2,826,464	+				-0.2
2,826,464	+				-0.5
2,826,464	+				-0.3
2,826,464	+				+0.8
2,826,464	+				-0.9
2,826,464	+				-0.4
2,826,464	+				-0.4
2,826,465	-				+0.2
2,826,465	-				+0.2
2,826,465	-				-0.6
2,826,474	+				+1.0
2,826,538	-				+0.3
2,826,671	+				-0.9
2,826,671	+				+0.1
2,826,898	-				-0.1
2,826,898	-				-0.3
2,826,993	+				+0.7
2,826,994	-				-0.1
2,826,994	-				+1.1
2,826,994	-				-0.7
2,826,994	-				+0.3
2,826,994	-				+0.4
2,826,994	-				+0.0
2,827,095	+		ABIE51_RS13110	0.13	-0.9
2,827,096	-		ABIE51_RS13110	0.13	-0.1
2,827,113	+		ABIE51_RS13110	0.15	+0.8
2,827,114	-		ABIE51_RS13110	0.15	+0.1
2,827,114	-		ABIE51_RS13110	0.15	-0.2
2,827,114	-		ABIE51_RS13110	0.15	-0.1
2,827,114	-		ABIE51_RS13110	0.15	-0.5
2,827,197	+		ABIE51_RS13110	0.21	+0.0
2,827,197	+		ABIE51_RS13110	0.21	-0.1
2,827,198	-		ABIE51_RS13110	0.21	-0.3
2,827,579	+		ABIE51_RS13110	0.52	+0.2
2,827,579	+		ABIE51_RS13110	0.52	-0.6
2,827,579	+		ABIE51_RS13110	0.52	+0.3
2,827,579	+		ABIE51_RS13110	0.52	+0.2
2,827,580	-		ABIE51_RS13110	0.52	+0.4
2,827,580	-		ABIE51_RS13110	0.52	+0.3
2,827,580	-		ABIE51_RS13110	0.52	+0.1
2,827,893	+		ABIE51_RS13110	0.76	+0.1
2,827,894	-		ABIE51_RS13110	0.76	+0.2
2,827,894	-		ABIE51_RS13110	0.76	+0.8
2,827,894	-		ABIE51_RS13110	0.76	+0.7
2,827,980	+		ABIE51_RS13110	0.83	+1.5
2,827,980	+		ABIE51_RS13110	0.83	+0.7
2,827,981	-		ABIE51_RS13110	0.83	+0.9
2,827,981	-		ABIE51_RS13110	0.83	-0.1
2,827,981	-		ABIE51_RS13110	0.83	+0.4
2,827,981	-		ABIE51_RS13110	0.83	+0.2
2,828,123	-				-0.4
2,828,251	+				+1.2
2,828,251	+				+1.0
2,828,251	+				+1.1
2,828,252	-				-0.6
2,828,322	-				-3.1
2,828,340	-				-2.2
2,828,521	+		ABIE51_RS13115	0.12	-2.3
2,828,522	-		ABIE51_RS13115	0.13	-2.3
2,828,578	+		ABIE51_RS13115	0.18	-2.1
2,828,578	+		ABIE51_RS13115	0.18	-1.5
2,828,579	-		ABIE51_RS13115	0.18	-2.5
2,828,579	-		ABIE51_RS13115	0.18	-0.7
2,828,579	-		ABIE51_RS13115	0.18	-1.5
2,828,579	-		ABIE51_RS13115	0.18	-2.1
2,828,579	-		ABIE51_RS13115	0.18	-1.5
2,828,579	-		ABIE51_RS13115	0.18	-1.6
2,828,752	+		ABIE51_RS13115	0.33	-2.4
2,828,752	+		ABIE51_RS13115	0.33	-1.4
2,828,752	+		ABIE51_RS13115	0.33	-2.9
2,828,752	+		ABIE51_RS13115	0.33	-3.2
2,828,752	+		ABIE51_RS13115	0.33	-2.8
2,828,752	+		ABIE51_RS13115	0.33	-1.7
2,828,752	+		ABIE51_RS13115	0.33	-2.5
2,828,752	+		ABIE51_RS13115	0.33	-4.1
2,828,752	+		ABIE51_RS13115	0.33	-3.2
2,828,752	+		ABIE51_RS13115	0.33	-1.7
2,828,752	+		ABIE51_RS13115	0.33	-1.7
2,828,753	-		ABIE51_RS13115	0.34	-0.7
2,828,753	-		ABIE51_RS13115	0.34	-1.4
2,828,753	-		ABIE51_RS13115	0.34	-2.1
2,828,753	-		ABIE51_RS13115	0.34	-2.9
2,828,753	-		ABIE51_RS13115	0.34	-1.7
2,828,756	+		ABIE51_RS13115	0.34	-3.9
2,828,756	+		ABIE51_RS13115	0.34	-1.5
2,828,756	+		ABIE51_RS13115	0.34	-3.7
2,828,756	+		ABIE51_RS13115	0.34	+0.3
2,828,757	-		ABIE51_RS13115	0.34	-1.3
2,828,758	+		ABIE51_RS13115	0.34	-3.3
2,828,759	-		ABIE51_RS13115	0.34	-1.5
2,828,774	-		ABIE51_RS13115	0.35	-2.7
2,828,774	-		ABIE51_RS13115	0.35	-1.3
2,828,899	+		ABIE51_RS13115	0.47	-2.8
2,828,899	+		ABIE51_RS13115	0.47	-3.3
2,828,899	+		ABIE51_RS13115	0.47	-2.3
2,828,899	+		ABIE51_RS13115	0.47	-2.1
2,828,900	-		ABIE51_RS13115	0.47	-1.2
2,828,900	-		ABIE51_RS13115	0.47	-1.8
2,828,900	-		ABIE51_RS13115	0.47	-3.6
2,828,900	-		ABIE51_RS13115	0.47	-2.4
2,828,905	+		ABIE51_RS13115	0.47	-1.8
2,828,905	+		ABIE51_RS13115	0.47	+0.3
2,829,058	+		ABIE51_RS13115	0.61	-1.3
2,829,058	+		ABIE51_RS13115	0.61	-0.2
2,829,058	+		ABIE51_RS13115	0.61	-2.2
2,829,058	+		ABIE51_RS13115	0.61	-3.7
2,829,059	-		ABIE51_RS13115	0.61	-0.7
2,829,059	-		ABIE51_RS13115	0.61	-1.0
2,829,059	-		ABIE51_RS13115	0.61	-3.7
2,829,079	+		ABIE51_RS13115	0.63	-2.4
2,829,079	+		ABIE51_RS13115	0.63	-2.6
2,829,080	-		ABIE51_RS13115	0.63	-3.7
2,829,080	-		ABIE51_RS13115	0.63	-1.2