Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS14490

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
3,146,900	+		ABIE51_RS14480	0.52	-0.1
3,146,900	+		ABIE51_RS14480	0.52	+0.3
3,146,900	+		ABIE51_RS14480	0.52	-0.7
3,146,900	+		ABIE51_RS14480	0.52	+0.1
3,146,900	+		ABIE51_RS14480	0.52	+0.3
3,146,900	+		ABIE51_RS14480	0.52	-0.3
3,146,900	+		ABIE51_RS14480	0.52	+0.8
3,146,901	-		ABIE51_RS14480	0.52	-0.3
3,146,987	+		ABIE51_RS14480	0.68	-0.3
3,146,987	+		ABIE51_RS14480	0.68	+0.5
3,146,988	-		ABIE51_RS14480	0.68	-0.2
3,147,035	+		ABIE51_RS14480	0.77	+0.4
3,147,035	+		ABIE51_RS14480	0.77	-0.5
3,147,505	+		ABIE51_RS14485	0.68	+0.1
3,147,762	+				+0.1
3,147,762	+				-0.4
3,147,763	-				-0.1
3,147,824	+				-3.5
3,147,825	-				-1.9
3,147,971	+		ABIE51_RS14490	0.34	-1.4
3,147,971	+		ABIE51_RS14490	0.34	-1.2
3,147,971	+		ABIE51_RS14490	0.34	-3.4
3,147,971	+		ABIE51_RS14490	0.34	-2.9
3,147,972	-		ABIE51_RS14490	0.34	-0.7
3,147,972	-		ABIE51_RS14490	0.34	-3.3
3,147,972	-		ABIE51_RS14490	0.34	-1.0
3,147,972	-		ABIE51_RS14490	0.34	+0.3
3,148,001	+		ABIE51_RS14490	0.39	-1.8
3,148,002	-		ABIE51_RS14490	0.39	-0.9
3,148,002	-		ABIE51_RS14490	0.39	-1.8
3,148,002	-		ABIE51_RS14490	0.39	-0.9
3,148,002	-		ABIE51_RS14490	0.39	-2.1
3,148,086	-		ABIE51_RS14490	0.54	-1.0
3,148,130	+		ABIE51_RS14490	0.62	-2.4
3,148,131	-		ABIE51_RS14490	0.62	-1.8
3,148,131	-		ABIE51_RS14490	0.62	-2.4
3,148,131	-		ABIE51_RS14490	0.62	-0.5
3,148,271	+		ABIE51_RS14490	0.86	-2.8
3,148,272	-		ABIE51_RS14490	0.87	-1.8
3,148,346	+				+0.5
3,148,514	-				+0.2
3,148,514	-				-0.1
3,148,747	+				+0.5
3,148,748	-				-0.2
3,148,749	+				+0.0
3,148,749	+				-0.2
3,148,750	-				-0.0
3,148,892	+		ABIE51_RS14495	0.12	-2.5
3,148,892	+		ABIE51_RS14495	0.12	-1.7
3,148,892	+		ABIE51_RS14495	0.12	-1.8
3,148,892	+		ABIE51_RS14495	0.12	-1.0
3,148,892	+		ABIE51_RS14495	0.12	-1.9
3,148,893	-		ABIE51_RS14495	0.12	-1.7
3,148,893	-		ABIE51_RS14495	0.12	-1.0
3,148,893	-		ABIE51_RS14495	0.12	-0.7
3,148,893	-		ABIE51_RS14495	0.12	-1.1
3,148,893	-		ABIE51_RS14495	0.12	-0.9
3,148,893	-		ABIE51_RS14495	0.12	-1.4
3,148,982	+		ABIE51_RS14495	0.22	-1.1
3,148,982	+		ABIE51_RS14495	0.22	-2.0
3,148,982	+		ABIE51_RS14495	0.22	-2.0
3,148,982	+		ABIE51_RS14495	0.22	-1.7
3,148,982	+		ABIE51_RS14495	0.22	-1.9
3,148,983	-		ABIE51_RS14495	0.22	-2.2
3,148,983	-		ABIE51_RS14495	0.22	-1.6
3,148,983	-		ABIE51_RS14495	0.22	-2.6
3,148,983	-		ABIE51_RS14495	0.22	-1.9
3,149,285	+		ABIE51_RS14495	0.55	-2.3
3,149,285	+		ABIE51_RS14495	0.55	-0.6
3,149,285	+		ABIE51_RS14495	0.55	-2.1