Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12285

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
2,650,784	+				-0.9
2,650,784	+				-0.7
2,650,785	-				-1.0
2,650,785	-				-0.6
2,650,785	-				-0.8
2,650,785	-				-0.5
2,651,221	+		ABIE51_RS12280	0.66	-1.0
2,651,222	-		ABIE51_RS12280	0.66	+0.4
2,651,483	+				+0.6
2,651,484	+				-0.1
2,651,484	+				-0.0
2,651,485	-				-0.9
2,651,485	-				-1.0
2,651,585	+				-0.4
2,651,585	+				-0.3
2,651,586	-				-0.6
2,651,586	-				-0.4
2,651,586	-				-0.2
2,651,587	+				-0.1
2,651,587	+				-0.0
2,651,587	+				+0.6
2,651,588	-				+0.2
2,651,588	-				+0.3
2,651,588	-				+0.5
2,651,734	-		ABIE51_RS12285	0.12	+0.0
2,651,867	+		ABIE51_RS12285	0.25	-0.5
2,651,868	-		ABIE51_RS12285	0.25	-0.1
2,651,868	-		ABIE51_RS12285	0.25	+0.3
2,652,497	+		ABIE51_RS12285	0.90	-0.8
2,652,498	-		ABIE51_RS12285	0.90	-0.5
2,652,498	-		ABIE51_RS12285	0.90	+0.2
2,652,592	+				+0.6
2,652,592	+				-0.8
2,652,593	-				+0.3
2,652,609	+				+0.7
2,652,609	+				+0.2
2,652,610	-				-0.7
2,652,663	+				-0.1
2,652,664	-				+0.1
2,652,683	-				+0.0
2,652,816	+				+0.2
2,652,816	+				-0.3
2,652,816	+				-0.2
2,652,816	+				-0.5
2,652,816	+				+0.4
2,652,817	-				-0.4
2,652,817	-				-0.2
2,652,958	+		ABIE51_RS12290	0.14	-0.1
2,652,959	-		ABIE51_RS12290	0.14	+0.0
2,652,959	-		ABIE51_RS12290	0.14	+0.2
2,652,959	-		ABIE51_RS12290	0.14	-0.4
2,652,959	-		ABIE51_RS12290	0.14	-0.6
2,652,959	-		ABIE51_RS12290	0.14	+0.4
2,652,959	-		ABIE51_RS12290	0.14	-0.2
2,652,959	-		ABIE51_RS12290	0.14	-0.7
2,652,959	-		ABIE51_RS12290	0.14	-0.3
2,653,090	+		ABIE51_RS12290	0.21	+0.8
2,653,090	+		ABIE51_RS12290	0.21	+0.6
2,653,091	-		ABIE51_RS12290	0.21	+1.0
2,653,210	+		ABIE51_RS12290	0.27	+0.8
2,653,210	+		ABIE51_RS12290	0.27	+0.2
2,653,210	+		ABIE51_RS12290	0.27	+0.6
2,653,211	-		ABIE51_RS12290	0.27	-0.0
2,653,211	-		ABIE51_RS12290	0.27	-0.3
2,653,252	+		ABIE51_RS12290	0.29	+0.1
2,653,381	+		ABIE51_RS12290	0.35	-0.1
2,653,381	+		ABIE51_RS12290	0.35	-0.4
2,653,382	-		ABIE51_RS12290	0.35	-0.3