Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS12160

Experiment: Ying_sugar7 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_sugar7 rep B; time point 2
2,623,570	+		ABIE51_RS12155	0.24	-0.8
2,623,570	+		ABIE51_RS12155	0.24	+0.6
2,623,570	+		ABIE51_RS12155	0.24	-0.6
2,623,570	+		ABIE51_RS12155	0.24	-0.2
2,623,570	+		ABIE51_RS12155	0.24	+0.2
2,623,571	-		ABIE51_RS12155	0.24	-0.7
2,623,571	-		ABIE51_RS12155	0.24	-0.3
2,623,571	-		ABIE51_RS12155	0.24	-0.8
2,623,571	-		ABIE51_RS12155	0.24	-0.7
2,623,571	-		ABIE51_RS12155	0.24	-0.6
2,623,571	-		ABIE51_RS12155	0.24	-0.4
2,623,582	+		ABIE51_RS12155	0.25	+0.1
2,623,583	-		ABIE51_RS12155	0.25	-0.1
2,623,583	-		ABIE51_RS12155	0.25	-0.9
2,623,583	-		ABIE51_RS12155	0.25	-1.2
2,623,736	-		ABIE51_RS12155	0.41	-1.4
2,623,736	-		ABIE51_RS12155	0.41	-0.8
2,623,837	+		ABIE51_RS12155	0.51	-0.4
2,623,837	+		ABIE51_RS12155	0.51	-0.9
2,623,837	+		ABIE51_RS12155	0.51	-0.3
2,623,837	+		ABIE51_RS12155	0.51	-0.4
2,623,838	-		ABIE51_RS12155	0.51	-0.7
2,623,838	-		ABIE51_RS12155	0.51	-1.3
2,623,838	-		ABIE51_RS12155	0.51	+0.6
2,623,838	-		ABIE51_RS12155	0.51	-1.3
2,623,838	-		ABIE51_RS12155	0.51	-1.1
2,623,838	-		ABIE51_RS12155	0.51	-1.4
2,623,909	+		ABIE51_RS12155	0.59	-0.7
2,623,973	-		ABIE51_RS12155	0.65	+0.0
2,624,032	+		ABIE51_RS12155	0.72	-0.1
2,624,122	+		ABIE51_RS12155	0.81	+0.3
2,624,123	-		ABIE51_RS12155	0.81	-0.1
2,624,123	-		ABIE51_RS12155	0.81	-2.5
2,624,123	-		ABIE51_RS12155	0.81	-0.5
2,624,123	-		ABIE51_RS12155	0.81	-0.3
2,624,251	+				-0.2
2,624,275	+				-0.3
2,624,275	+				-0.2
2,624,275	+				-0.2
2,624,275	+				-0.1
2,624,275	+				-0.4
2,624,275	+				-0.2
2,624,275	+				+0.2
2,624,275	+				-0.6
2,624,276	-				-0.8
2,624,276	-				-0.4
2,624,276	-				-1.0
2,624,276	-				-0.4
2,624,276	-				-2.2
2,624,276	-				-0.2
2,624,762	+		ABIE51_RS12160	0.41	-0.6
2,624,762	+		ABIE51_RS12160	0.41	-0.2
2,624,762	+		ABIE51_RS12160	0.41	-0.1
2,624,763	-		ABIE51_RS12160	0.41	-0.8
2,624,774	+		ABIE51_RS12160	0.43	-0.8
2,624,798	+		ABIE51_RS12160	0.47	-0.9
2,624,798	+		ABIE51_RS12160	0.47	-0.6
2,624,799	-		ABIE51_RS12160	0.47	-0.7
2,624,861	+		ABIE51_RS12160	0.56	+0.1
2,624,861	+		ABIE51_RS12160	0.56	-0.6
2,624,861	+		ABIE51_RS12160	0.56	-0.3
2,624,861	+		ABIE51_RS12160	0.56	-0.8
2,624,861	+		ABIE51_RS12160	0.56	-0.6
2,624,862	-		ABIE51_RS12160	0.56	+0.1
2,624,862	-		ABIE51_RS12160	0.56	-1.2
2,624,862	-		ABIE51_RS12160	0.56	-0.7
2,624,862	-		ABIE51_RS12160	0.56	+0.4
2,624,862	-		ABIE51_RS12160	0.56	-1.8
2,624,862	-		ABIE51_RS12160	0.56	-0.4
2,624,862	-		ABIE51_RS12160	0.56	-0.9
2,624,862	-		ABIE51_RS12160	0.56	-0.1
2,624,862	-		ABIE51_RS12160	0.56	-1.4
2,624,862	-		ABIE51_RS12160	0.56	-0.1
2,624,975	+		ABIE51_RS12160	0.74	+0.0
2,624,975	+		ABIE51_RS12160	0.74	-0.7
2,624,975	+		ABIE51_RS12160	0.74	-1.6
2,624,975	+		ABIE51_RS12160	0.74	-0.5
2,624,975	+		ABIE51_RS12160	0.74	-1.0
2,624,975	+		ABIE51_RS12160	0.74	-0.5
2,624,975	+		ABIE51_RS12160	0.74	-0.7
2,624,975	+		ABIE51_RS12160	0.74	+0.2
2,624,975	+		ABIE51_RS12160	0.74	-0.1
2,624,975	+		ABIE51_RS12160	0.74	+0.2
2,624,975	+		ABIE51_RS12160	0.74	+0.6
2,624,976	-		ABIE51_RS12160	0.74	-0.2
2,624,976	-		ABIE51_RS12160	0.74	-0.4
2,624,976	-		ABIE51_RS12160	0.74	-1.1
2,624,976	-		ABIE51_RS12160	0.74	+0.9
2,624,976	-		ABIE51_RS12160	0.74	+0.3
2,625,047	+		ABIE51_RS12160	0.85	+0.2
2,625,047	+		ABIE51_RS12160	0.85	+0.6
2,625,048	-		ABIE51_RS12160	0.85	-0.9
2,625,125	-				+0.5
2,625,598	+		ABIE51_RS12165	0.61	-2.2
2,625,826	+				-0.3
2,625,827	-				-0.1
2,625,827	-				+1.6
2,625,919	-				+0.3
2,625,965	+				-1.1
2,625,966	-				-0.5
2,625,966	-				-0.5
2,626,112	+		ABIE51_RS12170	0.44	-0.1
2,626,112	+		ABIE51_RS12170	0.44	-0.4
2,626,112	+		ABIE51_RS12170	0.44	+0.3
2,626,112	+		ABIE51_RS12170	0.44	+0.6
2,626,113	-		ABIE51_RS12170	0.45	+0.7
2,626,113	-		ABIE51_RS12170	0.45	-0.3