Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS06380

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
1,361,887	+				-0.4
1,361,887	+				-0.7
1,361,978	+				-0.1
1,361,978	+				-0.2
1,362,092	+		ABIE51_RS06375	0.11	-0.3
1,362,092	+		ABIE51_RS06375	0.11	-0.4
1,362,188	+		ABIE51_RS06375	0.27	-0.2
1,362,188	+		ABIE51_RS06375	0.27	-0.0
1,362,188	+		ABIE51_RS06375	0.27	+0.6
1,362,188	+		ABIE51_RS06375	0.27	-0.0
1,362,189	-		ABIE51_RS06375	0.27	+0.3
1,362,189	-		ABIE51_RS06375	0.27	+0.0
1,362,189	-		ABIE51_RS06375	0.27	+0.0
1,362,189	-		ABIE51_RS06375	0.27	-0.3
1,362,287	+		ABIE51_RS06375	0.43	-0.4
1,362,288	-		ABIE51_RS06375	0.43	-0.1
1,362,288	-		ABIE51_RS06375	0.43	-0.8
1,362,524	-		ABIE51_RS06375	0.80	+0.6
1,362,524	-		ABIE51_RS06375	0.80	-0.8
1,362,530	+		ABIE51_RS06375	0.81	-0.6
1,362,531	-		ABIE51_RS06375	0.81	-0.0
1,362,703	+		ABIE51_RS06380	0.12	+0.0
1,362,703	+		ABIE51_RS06380	0.12	+0.9
1,362,704	-		ABIE51_RS06380	0.12	-1.9
1,362,704	-		ABIE51_RS06380	0.12	-0.3
1,362,704	-		ABIE51_RS06380	0.12	+0.3
1,362,704	-		ABIE51_RS06380	0.12	+0.1
1,362,757	+		ABIE51_RS06380	0.23	-0.1
1,362,758	-		ABIE51_RS06380	0.23	-0.2
1,362,758	-		ABIE51_RS06380	0.23	-1.0
1,362,787	+		ABIE51_RS06380	0.29	+0.2
1,362,787	+		ABIE51_RS06380	0.29	+0.4
1,362,787	+		ABIE51_RS06380	0.29	+0.3
1,362,787	+		ABIE51_RS06380	0.29	-0.3
1,362,788	-		ABIE51_RS06380	0.29	+1.2
1,362,788	-		ABIE51_RS06380	0.29	-0.2
1,362,788	-		ABIE51_RS06380	0.29	-0.5
1,362,788	-		ABIE51_RS06380	0.29	+0.0
1,362,788	-		ABIE51_RS06380	0.29	-0.2
1,362,788	-		ABIE51_RS06380	0.29	-0.1
1,362,788	-		ABIE51_RS06380	0.29	+0.4
1,362,788	-		ABIE51_RS06380	0.29	-0.0
1,362,788	-		ABIE51_RS06380	0.29	+0.3
1,362,861	+		ABIE51_RS06380	0.44	-0.3
1,362,862	-		ABIE51_RS06380	0.44	+0.4
1,362,862	-		ABIE51_RS06380	0.44	+0.8
1,362,862	-		ABIE51_RS06380	0.44	+0.1
1,362,862	-		ABIE51_RS06380	0.44	+0.4
1,363,063	+		ABIE51_RS06380	0.84	+0.3
1,363,063	+		ABIE51_RS06380	0.84	+0.8
1,363,064	-		ABIE51_RS06380	0.85	-0.0
1,363,064	-		ABIE51_RS06380	0.85	-0.2
1,363,397	+				-0.4
1,363,398	-				+0.0
1,363,472	+		ABIE51_RS06385	0.21	+0.3
1,363,472	+		ABIE51_RS06385	0.21	+0.9
1,363,472	+		ABIE51_RS06385	0.21	-0.0
1,363,472	+		ABIE51_RS06385	0.21	-0.5
1,363,472	+		ABIE51_RS06385	0.21	-0.5
1,363,473	-		ABIE51_RS06385	0.22	-0.6
1,363,473	-		ABIE51_RS06385	0.22	+1.3
1,363,473	-		ABIE51_RS06385	0.22	-0.3
1,363,622	+		ABIE51_RS06385	0.48	-0.3
1,363,622	+		ABIE51_RS06385	0.48	-1.0
1,363,622	+		ABIE51_RS06385	0.48	+0.3
1,363,623	-		ABIE51_RS06385	0.48	-0.3
1,363,623	-		ABIE51_RS06385	0.48	+0.0
1,363,623	-		ABIE51_RS06385	0.48	+0.0
1,363,623	-		ABIE51_RS06385	0.48	-0.7
1,363,680	-		ABIE51_RS06385	0.58	-0.7
1,363,790	+		ABIE51_RS06385	0.78	+0.3
1,363,790	+		ABIE51_RS06385	0.78	-0.5
1,363,791	-		ABIE51_RS06385	0.78	-0.9
1,363,791	-		ABIE51_RS06385	0.78	-0.9
1,363,791	-		ABIE51_RS06385	0.78	+1.3
1,364,022	+				-0.2
1,364,022	+				-0.5
1,364,022	+				-0.3
1,364,022	+				-0.5
1,364,022	+				-1.7
1,364,022	+				-0.7
1,364,022	+				-0.5
1,364,022	+				-0.1
1,364,022	+				-0.5
1,364,023	-				+1.6
1,364,023	-				-1.1
1,364,023	-				-0.6
1,364,023	-				-0.7
1,364,023	-				-1.5
1,364,023	-				-0.8
1,364,023	-				-0.9
1,364,023	-				-0.3
1,364,023	-				+0.6
1,364,024	+				-0.1
1,364,024	+				-0.4
1,364,025	-				-0.6
1,364,098	-				-0.4
1,364,116	+				-0.9