Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS10670

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,317,200	+		ABIE51_RS10665	0.17	+0.1
2,317,200	+		ABIE51_RS10665	0.17	-0.2
2,317,201	-		ABIE51_RS10665	0.17	-0.3
2,317,205	-		ABIE51_RS10665	0.18	-0.4
2,317,353	-		ABIE51_RS10665	0.41	-0.1
2,317,390	-		ABIE51_RS10665	0.47	-0.1
2,317,461	-		ABIE51_RS10665	0.58	-0.8
2,317,570	-		ABIE51_RS10665	0.74	-0.5
2,317,667	+		ABIE51_RS10665	0.89	-0.4
2,317,668	-		ABIE51_RS10665	0.90	-0.1
2,317,680	-				-0.0
2,317,946	-				-0.2
2,318,148	+		ABIE51_RS10670	0.21	-0.2
2,318,760	+				-0.2
2,318,760	+				+0.2
2,318,761	-				+0.1
2,318,770	-				+0.7
2,318,877	+				+0.1
2,318,877	+				+0.5
2,318,962	-				+0.9
2,319,008	-				-0.3
2,319,089	+				-0.4
2,319,176	+				-0.3
2,319,530	-		ABIE51_RS10675	0.28	+0.3
2,319,604	+		ABIE51_RS10675	0.45	-0.0
2,319,604	+		ABIE51_RS10675	0.45	+0.3
2,319,670	-		ABIE51_RS10675	0.60	-1.2
2,319,765	-		ABIE51_RS10675	0.82	-0.0
2,319,846	+				+0.2
2,319,847	-				-0.2