Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_019130

Experiment: PM with p-Coumaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with p-Coumaric (C)
4,165,629	-		TX73_019125	0.48	+0.0
4,165,653	-		TX73_019125	0.49	-0.6
4,165,665	+		TX73_019125	0.50	-0.1
4,165,665	+		TX73_019125	0.50	+0.9
4,165,673	-		TX73_019125	0.50	+0.2
4,165,675	-		TX73_019125	0.51	+2.0
4,165,735	-		TX73_019125	0.54	+1.2
4,165,751	-		TX73_019125	0.55	+0.9
4,165,803	-		TX73_019125	0.57	-0.4
4,165,835	+		TX73_019125	0.59	+0.6
4,165,846	+		TX73_019125	0.60	-0.7
4,165,846	+		TX73_019125	0.60	+0.4
4,165,846	+		TX73_019125	0.60	-1.6
4,165,846	+		TX73_019125	0.60	+0.3
4,165,899	+		TX73_019125	0.63	+1.1
4,165,902	-		TX73_019125	0.63	+0.9
4,165,912	-		TX73_019125	0.63	+0.5
4,165,917	-		TX73_019125	0.64	+0.7
4,165,925	+		TX73_019125	0.64	+1.3
4,165,995	+		TX73_019125	0.68	+1.0
4,166,011	-		TX73_019125	0.69	+1.0
4,166,021	+		TX73_019125	0.69	+0.5
4,166,028	+		TX73_019125	0.69	+0.7
4,166,062	+		TX73_019125	0.71	-0.5
4,166,070	-		TX73_019125	0.72	-1.1
4,166,242	+		TX73_019125	0.81	-0.3
4,166,245	-		TX73_019125	0.81	+0.7
4,166,252	-		TX73_019125	0.81	+0.9
4,166,295	+		TX73_019125	0.84	-0.4
4,166,295	+		TX73_019125	0.84	-0.5
4,166,307	+		TX73_019125	0.84	+0.3
4,166,307	+		TX73_019125	0.84	+1.3
4,166,315	-		TX73_019125	0.85	+0.6
4,166,378	-		TX73_019125	0.88	+1.2
4,166,395	+		TX73_019125	0.89	+0.9
4,166,395	+		TX73_019125	0.89	+0.1
4,166,403	-		TX73_019125	0.90	+0.5
4,166,426	+				+0.9
4,166,436	+				+1.7
4,166,444	-				-0.0
4,166,455	+				+0.2
4,166,463	+				+0.9
4,166,547	-				-0.1
4,166,558	+				+0.9
4,166,618	-				+1.0
4,166,652	+				+0.9
4,166,704	+				+0.6
4,166,760	+				+0.4
4,166,832	-		TX73_019130	0.12	+0.5
4,166,851	+		TX73_019130	0.13	+1.3
4,166,888	+		TX73_019130	0.15	+0.7
4,166,890	-		TX73_019130	0.15	+1.5
4,166,919	+		TX73_019130	0.16	+0.2
4,166,935	+		TX73_019130	0.17	+0.9
4,166,935	+		TX73_019130	0.17	+1.1
4,166,935	+		TX73_019130	0.17	+1.0
4,166,943	-		TX73_019130	0.17	+0.4
4,166,976	-		TX73_019130	0.19	+1.8
4,167,013	-		TX73_019130	0.21	+2.4
4,167,043	-		TX73_019130	0.23	+1.9
4,167,058	+		TX73_019130	0.24	+0.5
4,167,070	+		TX73_019130	0.24	+1.9
4,167,072	+		TX73_019130	0.24	+1.9
4,167,077	-		TX73_019130	0.25	+0.5
4,167,080	-		TX73_019130	0.25	+1.4
4,167,091	+		TX73_019130	0.25	+2.7
4,167,170	+		TX73_019130	0.29	+0.7
4,167,170	-		TX73_019130	0.29	+0.9
4,167,171	-		TX73_019130	0.29	+1.2
4,167,180	+		TX73_019130	0.30	+0.7
4,167,183	+		TX73_019130	0.30	+1.5
4,167,183	+		TX73_019130	0.30	+1.4
4,167,235	-		TX73_019130	0.33	+0.9
4,167,252	+		TX73_019130	0.34	+0.2
4,167,252	+		TX73_019130	0.34	+1.2
4,167,252	+		TX73_019130	0.34	+0.7
4,167,252	+		TX73_019130	0.34	+2.7
4,167,252	+		TX73_019130	0.34	+1.3
4,167,252	+		TX73_019130	0.34	+1.6
4,167,252	+		TX73_019130	0.34	+0.9
4,167,260	-		TX73_019130	0.34	+0.9
4,167,260	-		TX73_019130	0.34	+0.9
4,167,260	-		TX73_019130	0.34	+1.6
4,167,260	-		TX73_019130	0.34	+1.6
4,167,260	-		TX73_019130	0.34	+2.7
4,167,260	-		TX73_019130	0.34	+1.1
4,167,260	-		TX73_019130	0.34	+1.2
4,167,260	-		TX73_019130	0.34	+0.9
4,167,260	-		TX73_019130	0.34	+1.3
4,167,260	-		TX73_019130	0.34	+1.2
4,167,260	-		TX73_019130	0.34	+1.3
4,167,260	-		TX73_019130	0.34	+0.9
4,167,291	-		TX73_019130	0.36	+2.2
4,167,297	+		TX73_019130	0.36	+0.9
4,167,305	-		TX73_019130	0.37	+2.7
4,167,305	-		TX73_019130	0.37	+2.4
4,167,321	+		TX73_019130	0.37	+2.1
4,167,331	+		TX73_019130	0.38	+2.6
4,167,355	+		TX73_019130	0.39	+2.6
4,167,375	+		TX73_019130	0.40	+1.1
4,167,385	+		TX73_019130	0.41	+1.4
4,167,392	+		TX73_019130	0.41	+0.9
4,167,412	-		TX73_019130	0.42	+2.3
4,167,563	+		TX73_019130	0.50	+2.3
4,167,593	+		TX73_019130	0.52	+1.3
4,167,621	+		TX73_019130	0.53	+1.2
4,167,621	+		TX73_019130	0.53	+1.5
4,167,629	-		TX73_019130	0.54	+1.6
4,167,637	+		TX73_019130	0.54	+1.5
4,167,717	+		TX73_019130	0.58	+0.3
4,167,725	-		TX73_019130	0.59	-0.1
4,167,767	+		TX73_019130	0.61	+2.1
4,167,775	-		TX73_019130	0.61	+1.0
4,167,792	-		TX73_019130	0.62	+1.5
4,167,858	+		TX73_019130	0.66	+2.0
4,167,861	-		TX73_019130	0.66	+2.3
4,167,911	+		TX73_019130	0.69	+0.2
4,167,966	-		TX73_019130	0.71	+0.5
4,167,982	+		TX73_019130	0.72	+0.9
4,167,990	+		TX73_019130	0.73	+1.2
4,168,003	-		TX73_019130	0.73	+1.3
4,168,023	+		TX73_019130	0.74	+1.5
4,168,077	+		TX73_019130	0.77	+1.9
4,168,097	-		TX73_019130	0.78	+1.3
4,168,128	+		TX73_019130	0.80	+0.5
4,168,142	+		TX73_019130	0.81	+3.2
4,168,150	-		TX73_019130	0.81	+2.6
4,168,160	-		TX73_019130	0.82	+1.5
4,168,178	+		TX73_019130	0.83	+1.4
4,168,178	+		TX73_019130	0.83	+0.9
4,168,186	-		TX73_019130	0.83	+1.1
4,168,220	+		TX73_019130	0.85	+1.8
4,168,230	-		TX73_019130	0.85	+0.4
4,168,260	-		TX73_019130	0.87	+1.3
4,168,262	+		TX73_019130	0.87	+0.0
4,168,314	+		TX73_019130	0.90	+1.4
4,168,360	+				+1.3
4,168,360	+				+1.8
4,168,368	-				+1.9
4,168,376	-				+0.9
4,168,376	-				+0.8
4,168,398	+				+0.4
4,168,419	+				+0.7
4,168,420	+				+0.9
4,168,442	+				+0.3
4,168,450	-				+1.0
4,168,466	-				+1.4
4,168,470	+				+0.8
4,168,470	+				+1.6
4,168,478	+				+1.4
4,168,480	+				+1.9
4,168,488	-				+1.6
4,168,502	+				+0.7
4,168,522	-				-0.7
4,168,531	-				+1.5
4,168,539	+				-0.3
4,168,539	+				-0.9
4,168,541	-				-0.0
4,168,544	+				-0.0
4,168,551	-				-1.5
4,168,552	-				+0.4
4,168,590	+				+1.9
4,168,590	+				-0.7
4,168,596	-				-1.0
4,168,598	-				-0.5
4,168,598	-				-1.9
4,168,598	-				-1.3
4,168,598	-				-1.5
4,168,598	-				+0.1
4,168,598	-				-1.1
4,168,598	-				-0.8
4,168,745	+				-0.3
4,168,753	-				+0.7
4,168,763	-				-0.6
4,168,798	-		TX73_019135	0.14	-0.0
4,168,842	-		TX73_019135	0.22	-0.3
4,168,842	-		TX73_019135	0.22	+0.4
4,168,847	-		TX73_019135	0.23	-0.5
4,168,848	-		TX73_019135	0.23	-0.1
4,168,849	-		TX73_019135	0.23	+1.2
4,168,885	+		TX73_019135	0.30	-0.3
4,168,898	+		TX73_019135	0.32	-0.3
4,168,898	+		TX73_019135	0.32	-0.1
4,168,898	+		TX73_019135	0.32	+0.2
4,168,906	-		TX73_019135	0.34	-0.5
4,168,906	-		TX73_019135	0.34	+0.3
4,168,933	+		TX73_019135	0.38	+0.0
4,168,967	+		TX73_019135	0.45	-1.5
4,168,974	+		TX73_019135	0.46	-1.0
4,168,990	+		TX73_019135	0.49	+0.2
4,168,990	+		TX73_019135	0.49	+0.0
4,169,004	+		TX73_019135	0.51	-0.4
4,169,019	-		TX73_019135	0.54	+0.1
4,169,021	+		TX73_019135	0.54	-1.3
4,169,021	+		TX73_019135	0.54	+0.1
4,169,037	-		TX73_019135	0.57	-0.9
4,169,048	-		TX73_019135	0.59	+0.8
4,169,055	-		TX73_019135	0.60	-0.0
4,169,066	+		TX73_019135	0.62	+0.6
4,169,066	+		TX73_019135	0.62	+0.2
4,169,066	+		TX73_019135	0.62	+0.2
4,169,074	-		TX73_019135	0.64	+0.5
4,169,074	-		TX73_019135	0.64	+1.6
4,169,076	-		TX73_019135	0.64	-0.5
4,169,076	-		TX73_019135	0.64	-0.6
4,169,111	+		TX73_019135	0.70	-0.1
4,169,111	-		TX73_019135	0.70	-0.6
4,169,111	-		TX73_019135	0.70	-0.4
4,169,119	-		TX73_019135	0.72	+0.1
4,169,119	-		TX73_019135	0.72	+0.7
4,169,119	-		TX73_019135	0.72	-0.3
4,169,119	-		TX73_019135	0.72	-0.4
4,169,121	+		TX73_019135	0.72	-0.8
4,169,126	+		TX73_019135	0.73	-1.2
4,169,132	+		TX73_019135	0.74	+0.9
4,169,134	-		TX73_019135	0.75	+0.0
4,169,140	-		TX73_019135	0.76	+0.3
4,169,140	-		TX73_019135	0.76	-0.7
4,169,150	+		TX73_019135	0.77	+0.2
4,169,150	+		TX73_019135	0.77	-0.4
4,169,150	+		TX73_019135	0.77	-0.4
4,169,155	+		TX73_019135	0.78	-0.1
4,169,160	+		TX73_019135	0.79	+0.7
4,169,171	-		TX73_019135	0.81	-0.8
4,169,172	+		TX73_019135	0.81	+1.6
4,169,176	-		TX73_019135	0.82	-0.1
4,169,211	+		TX73_019135	0.88	-0.2
4,169,228	+				+0.4
4,169,228	+				+0.2
4,169,236	-				+0.0
4,169,238	-				-0.4
4,169,259	+				+0.9
4,169,267	+				-0.1
4,169,303	+				-0.5
4,169,303	+				+0.6
4,169,310	-				-0.5
4,169,362	-				-0.0
4,169,369	-				-1.0
4,169,393	+				+0.7
4,169,393	+				+0.9
4,169,401	-				+0.9
4,169,442	+				+1.0
4,169,468	+				-0.3