Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014640

Experiment: PM with p-Coumaric (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with p-Coumaric (C)
3,199,787	-		TX73_014630	0.79	-0.2
3,199,795	+		TX73_014630	0.80	+0.1
3,199,795	+		TX73_014630	0.80	+0.3
3,199,799	-		TX73_014630	0.80	-0.1
3,199,802	+		TX73_014630	0.80	-0.5
3,199,804	+		TX73_014630	0.81	-1.1
3,199,815	+		TX73_014630	0.82	-0.6
3,199,817	+		TX73_014630	0.82	+0.3
3,199,844	+		TX73_014630	0.85	+0.1
3,199,859	+		TX73_014630	0.87	+0.3
3,199,859	+		TX73_014630	0.87	+0.7
3,199,859	+		TX73_014630	0.87	+0.3
3,199,867	-		TX73_014630	0.88	+1.3
3,199,867	-		TX73_014630	0.88	+0.8
3,199,877	-		TX73_014630	0.89	-0.1
3,199,908	-				+1.1
3,199,923	-				+0.5
3,199,950	+				-0.9
3,199,979	-				+1.0
3,199,995	+				+1.7
3,200,002	-				+0.3
3,200,003	-				-0.1
3,200,003	-				-0.2
3,200,025	-				+0.4
3,200,037	+				-0.7
3,200,071	-				+0.9
3,200,071	-				+0.7
3,200,151	-				-0.3
3,200,152	-				+0.1
3,200,172	+				+0.0
3,200,180	-				+0.7
3,200,245	-				+0.0
3,200,256	+				-0.5
3,200,256	+				-0.6
3,200,264	-				-0.2
3,200,264	-				+0.7
3,200,264	-				+1.7
3,200,269	+				-0.6
3,200,293	+				-0.6
3,200,293	+				+0.5
3,200,293	+				-2.3
3,200,301	-				+1.9
3,200,303	+				+0.6
3,200,311	-				-0.2
3,200,363	+				+0.5
3,200,382	+				-0.6
3,200,382	+				+0.6
3,200,420	-				-0.5
3,200,421	-				+3.1
3,200,469	-				-0.4
3,200,471	+				+0.1
3,200,517	-		TX73_014635	0.27	-0.5
3,200,523	+		TX73_014635	0.31	+0.6
3,200,531	+		TX73_014635	0.36	+0.2
3,200,531	+		TX73_014635	0.36	-0.8
3,200,536	+		TX73_014635	0.39	+1.1
3,200,539	-		TX73_014635	0.41	+0.8
3,200,616	+				+0.3
3,200,616	+				+0.2
3,200,624	-				-1.1
3,200,624	-				+0.3
3,200,631	-				+0.6
3,200,632	+				-0.9
3,200,635	-				+0.1
3,200,641	+				+0.3
3,200,664	+				+1.7
3,200,668	+				+0.5
3,200,671	+				-0.9
3,200,679	+				-0.2
3,200,681	+				+0.4
3,200,698	+				-0.3
3,200,698	+				-0.2
3,200,698	+				+0.4
3,200,698	+				+0.2
3,200,698	+				+0.4
3,200,698	+				+0.4
3,200,706	-				+0.3
3,200,706	-				-0.2
3,200,706	-				+0.2
3,200,706	-				-0.6
3,200,728	+				+0.3
3,200,736	-				-0.0
3,200,762	-				+0.5
3,200,762	-				-0.3
3,200,762	-				+0.8
3,200,765	+				+0.0
3,200,780	+				+0.4
3,200,788	-				+0.1
3,200,792	+				+0.2
3,200,793	-				+0.0
3,200,803	+				+0.9
3,200,865	+				-0.7
3,200,865	+				-2.3
3,200,891	+				-1.5
3,200,891	+				+0.7
3,200,898	-				+0.5
3,200,899	-				-0.3
3,200,900	+				+0.7
3,200,914	+		TX73_014640	0.10	-1.6
3,200,916	-		TX73_014640	0.11	-0.8
3,200,929	-		TX73_014640	0.11	-1.3
3,200,930	+		TX73_014640	0.11	-0.9
3,200,930	+		TX73_014640	0.11	+0.2
3,200,930	-		TX73_014640	0.11	-1.3
3,200,930	-		TX73_014640	0.11	-0.7
3,200,948	-		TX73_014640	0.13	-0.7
3,200,974	-		TX73_014640	0.15	-3.4
3,200,994	+		TX73_014640	0.16	+2.5
3,201,002	-		TX73_014640	0.16	-0.8
3,201,002	-		TX73_014640	0.16	+0.2
3,201,017	-		TX73_014640	0.18	+0.2
3,201,017	-		TX73_014640	0.18	-0.3
3,201,017	-		TX73_014640	0.18	+0.3
3,201,017	-		TX73_014640	0.18	-0.6
3,201,035	+		TX73_014640	0.19	-1.2
3,201,039	+		TX73_014640	0.19	-0.3
3,201,058	-		TX73_014640	0.20	+0.3
3,201,068	-		TX73_014640	0.21	-0.3
3,201,075	-		TX73_014640	0.22	+0.5
3,201,101	+		TX73_014640	0.23	-0.9
3,201,103	+		TX73_014640	0.24	-0.3
3,201,105	+		TX73_014640	0.24	+0.9
3,201,109	+		TX73_014640	0.24	-1.0
3,201,111	-		TX73_014640	0.24	-0.4
3,201,111	-		TX73_014640	0.24	+0.3
3,201,113	-		TX73_014640	0.24	-0.5
3,201,120	+		TX73_014640	0.25	+0.1
3,201,123	-		TX73_014640	0.25	-0.8
3,201,131	+		TX73_014640	0.25	+2.0
3,201,132	-		TX73_014640	0.26	-0.3
3,201,141	+		TX73_014640	0.26	-0.9
3,201,149	-		TX73_014640	0.27	+0.1
3,201,157	-		TX73_014640	0.27	-0.9
3,201,172	+		TX73_014640	0.28	-0.9
3,201,173	+		TX73_014640	0.28	+0.9
3,201,178	+		TX73_014640	0.29	-0.5
3,201,181	-		TX73_014640	0.29	-0.3
3,201,210	+		TX73_014640	0.31	-0.5
3,201,210	+		TX73_014640	0.31	+0.2
3,201,210	+		TX73_014640	0.31	+0.1
3,201,218	-		TX73_014640	0.32	-0.2
3,201,218	-		TX73_014640	0.32	-0.6
3,201,226	-		TX73_014640	0.32	-0.6
3,201,233	+		TX73_014640	0.33	-2.1
3,201,234	+		TX73_014640	0.33	-0.3
3,201,242	-		TX73_014640	0.33	-0.2
3,201,251	-		TX73_014640	0.34	+1.2
3,201,287	+		TX73_014640	0.36	+0.2
3,201,359	-		TX73_014640	0.41	+0.1
3,201,403	+		TX73_014640	0.44	-0.8
3,201,403	+		TX73_014640	0.44	-1.1
3,201,411	-		TX73_014640	0.45	-0.3
3,201,411	-		TX73_014640	0.45	-1.2
3,201,427	+		TX73_014640	0.46	-0.3
3,201,435	-		TX73_014640	0.47	-0.5
3,201,443	+		TX73_014640	0.47	-0.1
3,201,461	+		TX73_014640	0.48	-0.9
3,201,473	-		TX73_014640	0.49	-1.0
3,201,481	-		TX73_014640	0.50	-0.2
3,201,497	+		TX73_014640	0.51	+0.1
3,201,557	+		TX73_014640	0.55	-0.3
3,201,576	+		TX73_014640	0.56	+0.1
3,201,576	+		TX73_014640	0.56	+0.8
3,201,576	+		TX73_014640	0.56	+0.2
3,201,584	+		TX73_014640	0.57	+2.5
3,201,584	-		TX73_014640	0.57	-0.1
3,201,584	-		TX73_014640	0.57	-0.9
3,201,589	+		TX73_014640	0.57	+0.2
3,201,589	+		TX73_014640	0.57	-0.2
3,201,589	+		TX73_014640	0.57	+0.8
3,201,597	-		TX73_014640	0.58	-1.7
3,201,602	+		TX73_014640	0.58	-1.0
3,201,610	-		TX73_014640	0.59	-0.1
3,201,615	-		TX73_014640	0.59	+0.2
3,201,618	+		TX73_014640	0.59	+3.1
3,201,635	+		TX73_014640	0.61	-1.2
3,201,635	+		TX73_014640	0.61	-0.8
3,201,635	+		TX73_014640	0.61	-0.2
3,201,635	+		TX73_014640	0.61	-0.6
3,201,636	-		TX73_014640	0.61	-0.2
3,201,637	+		TX73_014640	0.61	-0.8
3,201,637	+		TX73_014640	0.61	+1.2
3,201,643	-		TX73_014640	0.61	-0.1
3,201,643	-		TX73_014640	0.61	+2.2
3,201,643	-		TX73_014640	0.61	+0.7
3,201,643	-		TX73_014640	0.61	-0.3
3,201,644	+		TX73_014640	0.61	+0.9
3,201,645	-		TX73_014640	0.61	+0.5
3,201,675	+		TX73_014640	0.63	-0.3
3,201,740	-		TX73_014640	0.68	-0.4
3,201,741	-		TX73_014640	0.68	+0.5
3,201,758	+		TX73_014640	0.69	+0.5
3,201,789	+		TX73_014640	0.71	+0.2
3,201,789	+		TX73_014640	0.71	-1.0
3,201,789	+		TX73_014640	0.71	-0.5
3,201,789	+		TX73_014640	0.71	-0.5
3,201,789	+		TX73_014640	0.71	-0.5
3,201,789	+		TX73_014640	0.71	+1.8
3,201,867	+		TX73_014640	0.77	+0.7
3,201,875	-		TX73_014640	0.77	-1.3
3,201,875	-		TX73_014640	0.77	-1.1
3,201,877	+		TX73_014640	0.77	+0.2
3,201,879	+		TX73_014640	0.78	-0.2
3,201,885	-		TX73_014640	0.78	-0.5
3,201,887	-		TX73_014640	0.78	-0.7
3,201,892	-		TX73_014640	0.78	+1.5
3,201,904	+		TX73_014640	0.79	-0.2
3,201,905	-		TX73_014640	0.79	+0.1
3,201,910	+		TX73_014640	0.80	+0.4
3,201,926	-		TX73_014640	0.81	-0.7
3,201,932	+		TX73_014640	0.81	-0.6
3,201,954	-		TX73_014640	0.83	-0.6
3,201,964	-		TX73_014640	0.83	-0.7
3,201,967	+		TX73_014640	0.84	-0.5
3,201,967	+		TX73_014640	0.84	-0.0
3,201,975	-		TX73_014640	0.84	+0.4
3,201,990	+		TX73_014640	0.85	-0.9
3,201,996	+		TX73_014640	0.86	+0.2
3,201,996	+		TX73_014640	0.86	-0.2
3,202,006	+		TX73_014640	0.86	+0.1
3,202,042	+		TX73_014640	0.89	+0.5
3,202,076	-				-0.6
3,202,081	+				+0.4
3,202,096	-				-0.9
3,202,098	+				-0.1
3,202,137	-				+0.0
3,202,185	-				-0.3
3,202,185	-				-0.2
3,202,186	+				-0.7
3,202,223	+				-2.9
3,202,231	-				-0.2
3,202,254	-				-0.0
3,202,256	+				-0.1
3,202,276	-				+0.7
3,202,294	+				-0.7
3,202,294	+				-1.2
3,202,300	-				+0.5
3,202,301	+				-0.9
3,202,301	+				-1.1
3,202,344	-		TX73_014645	0.13	-0.8
3,202,358	-		TX73_014645	0.15	-0.5
3,202,374	-		TX73_014645	0.16	-0.1
3,202,374	-		TX73_014645	0.16	-0.8
3,202,376	+		TX73_014645	0.17	-0.3
3,202,391	-		TX73_014645	0.18	+1.3
3,202,395	+		TX73_014645	0.19	+1.5
3,202,403	+		TX73_014645	0.20	-0.9
3,202,413	-		TX73_014645	0.21	-0.2
3,202,420	+		TX73_014645	0.22	+0.1
3,202,428	-		TX73_014645	0.23	-1.4
3,202,428	-		TX73_014645	0.23	-1.7
3,202,453	+		TX73_014645	0.25	+0.3
3,202,458	+		TX73_014645	0.26	-1.5
3,202,461	-		TX73_014645	0.26	-1.0
3,202,470	+		TX73_014645	0.27	-1.3
3,202,475	+		TX73_014645	0.28	-0.2
3,202,490	+		TX73_014645	0.30	-0.0
3,202,490	+		TX73_014645	0.30	-0.7
3,202,498	-		TX73_014645	0.31	-0.9
3,202,498	-		TX73_014645	0.31	-0.8
3,202,509	-		TX73_014645	0.32	-1.3
3,202,524	+		TX73_014645	0.34	-0.3
3,202,556	-		TX73_014645	0.37	-1.2
3,202,568	-		TX73_014645	0.39	+2.3
3,202,595	+		TX73_014645	0.42	-1.8
3,202,603	-		TX73_014645	0.43	-1.5
3,202,615	+		TX73_014645	0.44	-1.5
3,202,623	-		TX73_014645	0.45	+0.1
3,202,635	-		TX73_014645	0.46	-0.8
3,202,635	-		TX73_014645	0.46	-1.1
3,202,646	-		TX73_014645	0.48	-0.0
3,202,648	-		TX73_014645	0.48	-0.6
3,202,648	-		TX73_014645	0.48	-0.5
3,202,670	-		TX73_014645	0.50	-0.8
3,202,682	+		TX73_014645	0.52	+0.2
3,202,682	+		TX73_014645	0.52	-0.7
3,202,695	-		TX73_014645	0.53	-0.7
3,202,728	+		TX73_014645	0.57	-0.1
3,202,730	+		TX73_014645	0.57	-0.8
3,202,733	-		TX73_014645	0.58	+0.5
3,202,735	+		TX73_014645	0.58	-0.7
3,202,736	-		TX73_014645	0.58	-0.1
3,202,738	-		TX73_014645	0.58	-0.7
3,202,743	-		TX73_014645	0.59	+0.7
3,202,750	+		TX73_014645	0.59	-0.4
3,202,756	-		TX73_014645	0.60	-0.1
3,202,756	-		TX73_014645	0.60	-0.2
3,202,805	+		TX73_014645	0.66	-0.5
3,202,806	+		TX73_014645	0.66	-1.6
3,202,828	+		TX73_014645	0.68	-1.5
3,202,828	+		TX73_014645	0.68	+1.7
3,202,836	-		TX73_014645	0.69	-1.1
3,202,836	-		TX73_014645	0.69	-0.1
3,202,874	+		TX73_014645	0.74	-0.6
3,202,874	+		TX73_014645	0.74	-1.1
3,202,882	-		TX73_014645	0.75	-0.7
3,202,887	+		TX73_014645	0.75	+0.9
3,202,892	+		TX73_014645	0.76	-0.7
3,202,900	+		TX73_014645	0.77	+0.7
3,202,900	-		TX73_014645	0.77	-0.5
3,202,900	-		TX73_014645	0.77	-0.9
3,202,912	-		TX73_014645	0.78	-0.5
3,202,912	-		TX73_014645	0.78	-1.9
3,202,913	+		TX73_014645	0.78	+0.9
3,202,926	-		TX73_014645	0.80	-0.7
3,202,971	+		TX73_014645	0.85	-0.3
3,203,016	+				+0.3
3,203,024	-				+0.6
3,203,024	-				-0.6
3,203,036	+				+0.1
3,203,055	+				-0.4
3,203,058	-				+0.2
3,203,065	+				+0.9
3,203,178	+		TX73_014650	0.20	+0.3
3,203,183	+		TX73_014650	0.22	+0.2
3,203,190	+		TX73_014650	0.23	-0.6