Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_018735

Experiment: PM with benzoic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with benzoic (C)
4,076,033	-		TX73_018725	0.63	+0.0
4,076,070	+		TX73_018725	0.68	+0.6
4,076,072	+		TX73_018725	0.68	-0.4
4,076,075	+		TX73_018725	0.68	+1.4
4,076,083	-		TX73_018725	0.69	-0.1
4,076,083	-		TX73_018725	0.69	+1.4
4,076,086	-		TX73_018725	0.69	-0.2
4,076,112	-		TX73_018725	0.72	+0.2
4,076,113	-		TX73_018725	0.73	+0.5
4,076,116	+		TX73_018725	0.73	-0.3
4,076,134	-		TX73_018725	0.75	+0.7
4,076,151	-		TX73_018725	0.77	-1.0
4,076,155	+		TX73_018725	0.77	+0.8
4,076,187	+		TX73_018725	0.81	-0.0
4,076,198	-		TX73_018725	0.82	-0.9
4,076,208	-		TX73_018725	0.84	+0.6
4,076,263	-				+0.0
4,076,264	-				+0.1
4,076,284	-				-0.2
4,076,298	-				-0.9
4,076,317	+				+0.2
4,076,317	+				-0.4
4,076,322	+				-1.0
4,076,329	+				+0.4
4,076,343	-				+0.3
4,076,344	+				-2.3
4,076,354	+				+0.4
4,076,354	+				+0.1
4,076,356	+				+1.0
4,076,356	+				+0.8
4,076,356	+				+2.0
4,076,362	-				+0.1
4,076,374	-				-0.5
4,076,384	+				+0.6
4,076,430	+				+1.0
4,076,430	+				-0.3
4,076,430	+				-0.0
4,076,436	+				+0.1
4,076,462	-				-0.4
4,076,473	+				-0.4
4,076,494	-				-0.5
4,076,505	+				-0.3
4,076,549	+		TX73_018730	0.20	+2.0
4,076,556	+		TX73_018730	0.22	+1.0
4,076,561	+		TX73_018730	0.23	+1.0
4,076,561	+		TX73_018730	0.23	-0.5
4,076,561	+		TX73_018730	0.23	+0.2
4,076,564	-		TX73_018730	0.24	-0.7
4,076,564	-		TX73_018730	0.24	+1.6
4,076,564	-		TX73_018730	0.24	+1.0
4,076,564	-		TX73_018730	0.24	-1.4
4,076,564	-		TX73_018730	0.24	+2.0
4,076,569	-		TX73_018730	0.25	+0.2
4,076,594	+		TX73_018730	0.31	+1.1
4,076,594	-		TX73_018730	0.31	+0.1
4,076,599	-		TX73_018730	0.32	-0.2
4,076,604	+		TX73_018730	0.33	-0.4
4,076,619	+		TX73_018730	0.37	-0.2
4,076,621	+		TX73_018730	0.37	+0.0
4,076,649	+		TX73_018730	0.44	-0.6
4,076,656	-		TX73_018730	0.46	+0.5
4,076,657	-		TX73_018730	0.46	+0.5
4,076,726	+		TX73_018730	0.63	+0.1
4,076,743	+		TX73_018730	0.67	-0.1
4,076,743	+		TX73_018730	0.67	+1.0
4,076,824	-		TX73_018730	0.86	-0.8
4,076,851	+				+0.3
4,076,870	+				-0.0
4,076,878	-				-1.0
4,076,879	-				-0.1
4,076,926	-				-0.3
4,076,968	-				+0.9
4,077,054	+				-0.4
4,077,054	+				+0.8
4,077,054	+				-2.1
4,077,062	-				+0.5
4,077,062	-				+0.1
4,077,084	-				+0.0
4,077,119	+				+0.2
4,077,129	+				-0.0
4,077,138	-				-0.6
4,077,156	+		TX73_018735	0.11	+0.2
4,077,160	-		TX73_018735	0.11	-0.0
4,077,160	-		TX73_018735	0.11	-1.0
4,077,185	+		TX73_018735	0.13	+0.0
4,077,196	+		TX73_018735	0.14	+0.4
4,077,196	+		TX73_018735	0.14	+0.3
4,077,204	-		TX73_018735	0.15	-0.4
4,077,238	-		TX73_018735	0.18	-0.1
4,077,293	-		TX73_018735	0.23	-0.7
4,077,320	+		TX73_018735	0.25	+0.4
4,077,320	+		TX73_018735	0.25	+0.1
4,077,330	+		TX73_018735	0.26	-0.3
4,077,338	-		TX73_018735	0.26	-0.3
4,077,338	-		TX73_018735	0.26	-1.3
4,077,373	-		TX73_018735	0.29	-0.9
4,077,376	+		TX73_018735	0.30	-0.6
4,077,384	-		TX73_018735	0.30	-0.2
4,077,384	-		TX73_018735	0.30	-0.1
4,077,456	-		TX73_018735	0.36	-0.4
4,077,456	-		TX73_018735	0.36	-2.2
4,077,468	+		TX73_018735	0.38	-0.6
4,077,514	-		TX73_018735	0.41	-1.4
4,077,517	-		TX73_018735	0.42	+0.3
4,077,525	+		TX73_018735	0.42	-0.8
4,077,542	-		TX73_018735	0.44	+0.4
4,077,560	-		TX73_018735	0.45	-0.4
4,077,573	-		TX73_018735	0.46	+0.3
4,077,587	+		TX73_018735	0.48	-1.1
4,077,592	+		TX73_018735	0.48	-2.1
4,077,643	+		TX73_018735	0.52	-0.3
4,077,643	+		TX73_018735	0.52	+0.5
4,077,644	+		TX73_018735	0.52	-0.1
4,077,651	-		TX73_018735	0.53	-0.3
4,077,651	-		TX73_018735	0.53	-1.3
4,077,651	-		TX73_018735	0.53	-0.2
4,077,652	-		TX73_018735	0.53	-1.3
4,077,708	+		TX73_018735	0.58	+0.3
4,077,716	-		TX73_018735	0.59	-1.0
4,077,732	+		TX73_018735	0.60	-0.5
4,077,745	-		TX73_018735	0.61	-0.5
4,077,766	+		TX73_018735	0.63	+0.8
4,077,766	+		TX73_018735	0.63	-0.1
4,077,766	+		TX73_018735	0.63	-0.6
4,077,776	-		TX73_018735	0.64	+1.0
4,077,816	-		TX73_018735	0.67	+0.2
4,077,845	+		TX73_018735	0.70	+0.9
4,077,850	-		TX73_018735	0.70	+0.9
4,077,865	-		TX73_018735	0.71	-0.1
4,077,873	-		TX73_018735	0.72	+0.0
4,077,873	-		TX73_018735	0.72	-0.6
4,077,879	+		TX73_018735	0.72	-1.4
4,077,880	+		TX73_018735	0.73	-0.5
4,077,893	-		TX73_018735	0.74	+0.8
4,077,900	-		TX73_018735	0.74	-1.2
4,077,919	-		TX73_018735	0.76	-0.4
4,077,975	-		TX73_018735	0.81	+0.8
4,077,993	+		TX73_018735	0.82	-0.1
4,078,000	+		TX73_018735	0.83	-0.2
4,078,000	+		TX73_018735	0.83	-0.5
4,078,002	+		TX73_018735	0.83	-0.0
4,078,006	-		TX73_018735	0.83	-0.6
4,078,008	-		TX73_018735	0.83	+0.0
4,078,008	-		TX73_018735	0.83	+0.3
4,078,012	+		TX73_018735	0.84	+0.3
4,078,012	+		TX73_018735	0.84	-1.0
4,078,051	+		TX73_018735	0.87	-0.1
4,078,051	+		TX73_018735	0.87	+0.2
4,078,051	+		TX73_018735	0.87	-0.4
4,078,059	-		TX73_018735	0.88	-0.8
4,078,095	+				-0.3
4,078,117	-				-0.7
4,078,122	-				-0.5
4,078,123	+				+0.3
4,078,134	+				-0.7
4,078,156	+				-3.2
4,078,164	-				+0.1
4,078,169	-				-0.4
4,078,171	-				+0.8
4,078,171	-				-0.2
4,078,173	+				-0.6
4,078,196	-				-1.5
4,078,219	+				-1.3
4,078,230	-				+0.6
4,078,230	-				-1.5
4,078,231	+				-1.3
4,078,290	+				+0.6
4,078,298	-				-0.7
4,078,298	-				+0.5
4,078,303	-				-1.8
4,078,317	-				+2.1
4,078,327	-				+0.4
4,078,349	-				+0.5
4,078,361	+				-0.2
4,078,366	+				-0.4
4,078,374	-				-0.4
4,078,379	+				-0.1
4,078,382	-				+0.5
4,078,384	+				+0.1
4,078,387	-				+0.5
4,078,390	-				-1.2
4,078,392	-				+0.4
4,078,392	-				-0.3
4,078,410	+				-0.4
4,078,426	-				+0.3
4,078,448	-				+0.1
4,078,472	+				+1.0
4,078,472	+				+0.2
4,078,472	+				+0.4
4,078,472	+				+0.3
4,078,474	-				+0.0
4,078,480	-				+0.4
4,078,488	-				-0.1
4,078,488	-				+0.2
4,078,496	-				+0.3
4,078,505	+				+1.0
4,078,515	+				+0.3
4,078,529	-				-1.6
4,078,579	+				+0.4
4,078,585	-				-0.3
4,078,636	+		TX73_018740	0.12	+0.9
4,078,726	+		TX73_018740	0.17	+0.3
4,078,743	+		TX73_018740	0.18	+0.3
4,078,772	-		TX73_018740	0.19	+1.4
4,078,829	-		TX73_018740	0.22	+1.0
4,078,850	+		TX73_018740	0.23	+1.0
4,078,858	-		TX73_018740	0.24	+0.7
4,078,944	+		TX73_018740	0.28	+0.2
4,078,988	+		TX73_018740	0.30	+1.8
4,079,046	-		TX73_018740	0.34	+0.3
4,079,073	+		TX73_018740	0.35	+1.2
4,079,096	-		TX73_018740	0.36	+0.8
4,079,096	-		TX73_018740	0.36	-0.7
4,079,113	-		TX73_018740	0.37	+0.7
4,079,145	+		TX73_018740	0.39	+0.2