Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024325

Experiment: PM with succinate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PM with succinate (C)
5,277,169	-				-0.1
5,277,182	+				+0.7
5,277,193	+				-0.3
5,277,199	-				+0.7
5,277,200	+				+0.1
5,277,201	+				+0.7
5,277,201	+				+0.3
5,277,201	+				-1.3
5,277,201	+				-0.2
5,277,203	+				-0.2
5,277,205	+				-0.1
5,277,208	-				-0.8
5,277,208	-				-0.1
5,277,209	-				-0.7
5,277,209	-				+0.1
5,277,209	-				-1.0
5,277,209	-				-0.3
5,277,209	-				-1.1
5,277,210	-				-0.6
5,277,210	-				-0.7
5,277,244	+				+0.2
5,277,244	+				+1.2
5,277,252	-				-0.1
5,277,287	+				-1.0
5,277,305	-				+0.6
5,277,330	+				+0.2
5,277,360	-				+0.4
5,277,360	-				+0.3
5,277,360	-				-0.7
5,277,374	-		TX73_024320	0.11	+0.5
5,277,379	-		TX73_024320	0.11	+0.2
5,277,379	-		TX73_024320	0.11	-0.2
5,277,424	-		TX73_024320	0.16	+0.0
5,277,431	-		TX73_024320	0.17	+0.3
5,277,450	-		TX73_024320	0.19	-1.8
5,277,464	-		TX73_024320	0.21	-0.6
5,277,496	+		TX73_024320	0.25	-0.1
5,277,557	+		TX73_024320	0.31	-2.6
5,277,614	+		TX73_024320	0.38	-0.5
5,277,622	-		TX73_024320	0.39	+0.1
5,277,669	+		TX73_024320	0.44	-0.2
5,277,734	-		TX73_024320	0.51	-0.3
5,277,743	-		TX73_024320	0.52	-0.5
5,277,750	-		TX73_024320	0.53	-1.5
5,277,771	+		TX73_024320	0.56	-0.3
5,277,783	+		TX73_024320	0.57	-1.9
5,277,791	-		TX73_024320	0.58	+0.9
5,277,791	-		TX73_024320	0.58	+0.1
5,277,793	+		TX73_024320	0.58	-0.4
5,277,818	+		TX73_024320	0.61	+0.4
5,277,873	+		TX73_024320	0.67	-1.3
5,277,879	+		TX73_024320	0.68	+1.1
5,277,883	+		TX73_024320	0.68	-0.3
5,277,887	-		TX73_024320	0.69	+0.8
5,277,928	-		TX73_024320	0.73	-0.5
5,277,995	+		TX73_024320	0.81	+0.4
5,278,008	+		TX73_024320	0.82	-0.7
5,278,062	+		TX73_024320	0.88	+0.4
5,278,116	+				-0.1
5,278,148	-				-0.1
5,278,169	+				-0.7
5,278,185	-				+1.0
5,278,204	-				-0.4
5,278,240	-				-0.8
5,278,243	+				+0.2
5,278,250	-				+0.6
5,278,255	-				-0.3
5,278,289	-				-0.2
5,278,310	-				-0.2
5,278,445	-				-0.2
5,278,501	-		TX73_024325	0.11	+0.2
5,278,525	-		TX73_024325	0.11	-0.2
5,278,528	+		TX73_024325	0.12	+0.5
5,278,581	-		TX73_024325	0.13	+0.3
5,278,663	+		TX73_024325	0.16	-0.5
5,278,679	+		TX73_024325	0.16	-0.1
5,278,746	+		TX73_024325	0.18	+0.9
5,278,754	+		TX73_024325	0.19	+0.9
5,278,754	-		TX73_024325	0.19	-0.4
5,278,804	-		TX73_024325	0.20	+0.2
5,278,887	-		TX73_024325	0.23	+0.1
5,278,897	+		TX73_024325	0.23	+0.3
5,278,934	-		TX73_024325	0.24	+0.3
5,278,934	-		TX73_024325	0.24	+0.7
5,278,972	+		TX73_024325	0.26	+0.6
5,278,989	+		TX73_024325	0.26	-0.3
5,278,997	-		TX73_024325	0.26	+0.2
5,278,997	-		TX73_024325	0.26	-0.4
5,279,038	-		TX73_024325	0.28	+0.6
5,279,063	-		TX73_024325	0.28	+0.1
5,279,063	-		TX73_024325	0.28	-0.5
5,279,073	-		TX73_024325	0.29	+1.0
5,279,108	-		TX73_024325	0.30	-0.8
5,279,119	-		TX73_024325	0.30	+1.0
5,279,168	+		TX73_024325	0.32	+0.7
5,279,178	+		TX73_024325	0.32	+0.0
5,279,186	-		TX73_024325	0.32	-0.7
5,279,299	+		TX73_024325	0.36	-0.1
5,279,362	-		TX73_024325	0.38	+0.1
5,279,467	-		TX73_024325	0.41	+0.2
5,279,531	-		TX73_024325	0.43	+1.3
5,279,569	+		TX73_024325	0.45	-0.0
5,279,650	+		TX73_024325	0.47	+0.4
5,279,679	+		TX73_024325	0.48	+0.4
5,279,682	-		TX73_024325	0.48	-0.7
5,279,687	-		TX73_024325	0.48	+0.3
5,279,718	-		TX73_024325	0.49	+0.3
5,279,741	-		TX73_024325	0.50	-0.9
5,279,745	-		TX73_024325	0.50	-0.4
5,279,800	+		TX73_024325	0.52	+0.8
5,279,808	-		TX73_024325	0.52	+1.2
5,279,808	-		TX73_024325	0.52	+0.3
5,279,835	+		TX73_024325	0.53	-0.5
5,279,856	-		TX73_024325	0.54	-0.1
5,279,915	-		TX73_024325	0.56	+0.2
5,280,014	+		TX73_024325	0.59	-0.5
5,280,112	+		TX73_024325	0.62	-0.3
5,280,138	-		TX73_024325	0.63	+0.9
5,280,231	-		TX73_024325	0.66	+0.6
5,280,231	-		TX73_024325	0.66	+0.0
5,280,241	-		TX73_024325	0.66	+1.1
5,280,241	-		TX73_024325	0.66	+1.0
5,280,300	+		TX73_024325	0.68	-0.4
5,280,308	-		TX73_024325	0.68	+0.0
5,280,308	-		TX73_024325	0.68	+0.4
5,280,376	+		TX73_024325	0.70	+0.6
5,280,376	+		TX73_024325	0.70	-1.1
5,280,420	+		TX73_024325	0.72	+0.1
5,280,425	+		TX73_024325	0.72	+0.9
5,280,433	-		TX73_024325	0.72	-0.1
5,280,443	-		TX73_024325	0.72	-2.3
5,280,447	+		TX73_024325	0.72	-0.5
5,280,450	-		TX73_024325	0.72	+0.9
5,280,469	+		TX73_024325	0.73	-0.3
5,280,469	+		TX73_024325	0.73	+0.6
5,280,492	+		TX73_024325	0.74	-0.7
5,280,500	-		TX73_024325	0.74	+0.4
5,280,516	-		TX73_024325	0.75	+0.2
5,280,540	+		TX73_024325	0.75	+0.6
5,280,554	-		TX73_024325	0.76	+0.9
5,280,593	+		TX73_024325	0.77	+0.6
5,280,593	+		TX73_024325	0.77	-0.4
5,280,601	-		TX73_024325	0.77	-0.1
5,280,641	-		TX73_024325	0.79	-0.7
5,280,737	-		TX73_024325	0.82	-0.2
5,280,753	-		TX73_024325	0.82	-0.2
5,280,764	+		TX73_024325	0.82	-0.6
5,280,793	+		TX73_024325	0.83	-0.5
5,280,826	+		TX73_024325	0.84	+0.5
5,280,834	-		TX73_024325	0.85	+0.2
5,280,934	-		TX73_024325	0.88	-0.0
5,280,954	-		TX73_024325	0.88	+0.1
5,280,954	-		TX73_024325	0.88	-0.7
5,280,987	-		TX73_024325	0.90	+0.8
5,280,994	+		TX73_024325	0.90	+0.1
5,281,039	-				-0.6
5,281,053	+				-1.2
5,281,160	-				+0.2
5,281,181	+				-0.2
5,281,190	-				-0.9
5,281,258	+				+0.9
5,281,263	+				-1.1
5,281,276	-				-0.3
5,281,326	+				-0.2
5,281,367	+				+0.5
5,281,446	+				+0.9
5,281,456	+				+1.5
5,281,461	+				-0.1
5,281,469	-				-0.5
5,281,469	-				-0.2
5,281,511	+				-0.8
5,281,537	-				-0.3
5,281,577	-		TX73_024330	0.12	+0.1
5,281,620	-		TX73_024330	0.14	+1.0
5,281,649	-		TX73_024330	0.16	+0.2
5,281,665	-		TX73_024330	0.17	-0.6
5,281,680	-		TX73_024330	0.18	+0.5
5,281,682	+		TX73_024330	0.18	+0.5
5,281,687	+		TX73_024330	0.18	-1.1
5,281,687	+		TX73_024330	0.18	-2.4
5,281,687	+		TX73_024330	0.18	+0.1
5,281,687	+		TX73_024330	0.18	+0.9
5,281,695	-		TX73_024330	0.18	+0.6
5,281,700	-		TX73_024330	0.19	-1.3
5,281,700	-		TX73_024330	0.19	+0.0
5,281,794	+		TX73_024330	0.24	+0.6
5,281,922	-		TX73_024330	0.31	-0.6
5,281,925	-		TX73_024330	0.31	-0.0
5,281,959	-		TX73_024330	0.33	+1.9
5,281,988	+		TX73_024330	0.35	-0.7
5,282,041	+		TX73_024330	0.38	+0.8
5,282,055	-		TX73_024330	0.38	-0.0
5,282,057	-		TX73_024330	0.38	+0.6
5,282,065	-		TX73_024330	0.39	+0.2
5,282,109	-		TX73_024330	0.41	-0.3
5,282,114	-		TX73_024330	0.42	-0.2
5,282,123	+		TX73_024330	0.42	-0.1
5,282,128	+		TX73_024330	0.42	-1.0
5,282,161	-		TX73_024330	0.44	-0.4
5,282,161	-		TX73_024330	0.44	-0.0
5,282,172	-		TX73_024330	0.45	+0.4
5,282,179	+		TX73_024330	0.45	-0.4
5,282,187	-		TX73_024330	0.46	+0.0
5,282,218	+		TX73_024330	0.47	-1.1
5,282,220	+		TX73_024330	0.47	+0.1
5,282,221	-		TX73_024330	0.47	-0.1
5,282,245	+		TX73_024330	0.49	-1.1
5,282,303	+		TX73_024330	0.52	+0.9
5,282,311	-		TX73_024330	0.52	-0.4