Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04622

Experiment: Motility test in 1X LB; 1 day; outer cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04621 and MPMX20_04622 overlap by 7 nucleotidesMPMX20_04622 and MPMX20_04623 are separated by 0 nucleotides MPMX20_04621: MPMX20_04621 - ATPase RavA, at 4,840,214 to 4,841,710 _04621 MPMX20_04622: MPMX20_04622 - Protein ViaA, at 4,841,704 to 4,843,155 _04622 MPMX20_04623: MPMX20_04623 - Aspartate--ammonia ligase, at 4,843,156 to 4,844,148 _04623 Position (kb) 4841 4842 4843 4844Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4840.720 kb on - strand, within MPMX20_04621at 4840.720 kb on - strand, within MPMX20_04621at 4840.722 kb on - strand, within MPMX20_04621at 4840.754 kb on - strand, within MPMX20_04621at 4840.759 kb on - strand, within MPMX20_04621at 4840.791 kb on + strand, within MPMX20_04621at 4840.844 kb on - strand, within MPMX20_04621at 4840.855 kb on + strand, within MPMX20_04621at 4840.855 kb on - strand, within MPMX20_04621at 4840.906 kb on + strand, within MPMX20_04621at 4840.959 kb on - strand, within MPMX20_04621at 4840.994 kb on - strand, within MPMX20_04621at 4840.996 kb on + strand, within MPMX20_04621at 4841.009 kb on - strand, within MPMX20_04621at 4841.011 kb on - strand, within MPMX20_04621at 4841.011 kb on - strand, within MPMX20_04621at 4841.016 kb on - strand, within MPMX20_04621at 4841.048 kb on - strand, within MPMX20_04621at 4841.082 kb on + strand, within MPMX20_04621at 4841.128 kb on + strand, within MPMX20_04621at 4841.131 kb on - strand, within MPMX20_04621at 4841.136 kb on - strand, within MPMX20_04621at 4841.155 kb on - strand, within MPMX20_04621at 4841.158 kb on + strand, within MPMX20_04621at 4841.166 kb on - strand, within MPMX20_04621at 4841.166 kb on - strand, within MPMX20_04621at 4841.188 kb on + strand, within MPMX20_04621at 4841.284 kb on + strand, within MPMX20_04621at 4841.289 kb on + strand, within MPMX20_04621at 4841.289 kb on + strand, within MPMX20_04621at 4841.289 kb on + strand, within MPMX20_04621at 4841.289 kb on + strand, within MPMX20_04621at 4841.303 kb on - strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.347 kb on + strand, within MPMX20_04621at 4841.353 kb on - strand, within MPMX20_04621at 4841.353 kb on - strand, within MPMX20_04621at 4841.445 kb on + strand, within MPMX20_04621at 4841.523 kb on - strand, within MPMX20_04621at 4841.533 kb on - strand, within MPMX20_04621at 4841.572 kb on + strandat 4841.580 kb on - strandat 4841.643 kb on + strandat 4841.661 kb on - strandat 4841.715 kb on + strandat 4841.726 kb on + strandat 4841.770 kb on + strandat 4841.779 kb on + strandat 4841.779 kb on + strandat 4841.779 kb on + strandat 4841.930 kb on + strand, within MPMX20_04622at 4841.930 kb on + strand, within MPMX20_04622at 4841.930 kb on + strand, within MPMX20_04622at 4841.930 kb on + strand, within MPMX20_04622at 4841.930 kb on + strand, within MPMX20_04622at 4841.938 kb on - strand, within MPMX20_04622at 4841.938 kb on - strand, within MPMX20_04622at 4841.986 kb on + strand, within MPMX20_04622at 4841.987 kb on + strand, within MPMX20_04622at 4842.073 kb on + strand, within MPMX20_04622at 4842.122 kb on + strand, within MPMX20_04622at 4842.122 kb on + strand, within MPMX20_04622at 4842.155 kb on + strand, within MPMX20_04622at 4842.163 kb on + strand, within MPMX20_04622at 4842.168 kb on + strand, within MPMX20_04622at 4842.186 kb on - strand, within MPMX20_04622at 4842.186 kb on - strand, within MPMX20_04622at 4842.201 kb on - strand, within MPMX20_04622at 4842.220 kb on - strand, within MPMX20_04622at 4842.249 kb on + strand, within MPMX20_04622at 4842.329 kb on + strand, within MPMX20_04622at 4842.357 kb on + strand, within MPMX20_04622at 4842.373 kb on - strand, within MPMX20_04622at 4842.373 kb on - strand, within MPMX20_04622at 4842.446 kb on + strand, within MPMX20_04622at 4842.519 kb on + strand, within MPMX20_04622at 4842.523 kb on - strand, within MPMX20_04622at 4842.570 kb on + strand, within MPMX20_04622at 4842.694 kb on - strand, within MPMX20_04622at 4842.703 kb on - strand, within MPMX20_04622at 4842.704 kb on + strand, within MPMX20_04622at 4842.712 kb on - strand, within MPMX20_04622at 4842.739 kb on + strand, within MPMX20_04622at 4842.742 kb on - strand, within MPMX20_04622at 4842.747 kb on - strand, within MPMX20_04622at 4842.747 kb on - strand, within MPMX20_04622at 4842.747 kb on - strand, within MPMX20_04622at 4842.747 kb on - strand, within MPMX20_04622at 4842.809 kb on + strand, within MPMX20_04622at 4842.822 kb on - strand, within MPMX20_04622at 4842.833 kb on + strand, within MPMX20_04622at 4842.833 kb on + strand, within MPMX20_04622at 4842.833 kb on + strand, within MPMX20_04622at 4842.883 kb on + strand, within MPMX20_04622at 4842.949 kb on + strand, within MPMX20_04622at 4843.012 kb on - strandat 4843.022 kb on - strandat 4843.027 kb on + strandat 4843.035 kb on - strandat 4843.056 kb on - strandat 4843.094 kb on + strandat 4843.096 kb on - strandat 4843.139 kb on + strandat 4843.209 kb on + strandat 4843.217 kb on - strandat 4843.260 kb on + strand, within MPMX20_04623at 4843.260 kb on + strand, within MPMX20_04623at 4843.260 kb on + strand, within MPMX20_04623at 4843.263 kb on - strand, within MPMX20_04623at 4843.287 kb on - strand, within MPMX20_04623at 4843.318 kb on + strand, within MPMX20_04623at 4843.448 kb on - strand, within MPMX20_04623at 4843.450 kb on + strand, within MPMX20_04623at 4843.624 kb on + strand, within MPMX20_04623at 4843.624 kb on + strand, within MPMX20_04623at 4843.632 kb on + strand, within MPMX20_04623at 4843.640 kb on - strand, within MPMX20_04623at 4843.640 kb on - strand, within MPMX20_04623at 4843.640 kb on - strand, within MPMX20_04623at 4843.701 kb on - strand, within MPMX20_04623at 4843.706 kb on - strand, within MPMX20_04623at 4843.770 kb on + strand, within MPMX20_04623at 4843.856 kb on + strand, within MPMX20_04623at 4843.862 kb on - strand, within MPMX20_04623at 4843.876 kb on + strand, within MPMX20_04623at 4843.884 kb on - strand, within MPMX20_04623at 4843.943 kb on + strand, within MPMX20_04623at 4843.951 kb on - strand, within MPMX20_04623at 4843.951 kb on - strand, within MPMX20_04623at 4844.014 kb on - strand, within MPMX20_04623at 4844.047 kb on + strand, within MPMX20_04623at 4844.072 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; outer cut; 0.3% agar
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4,840,720 - MPMX20_04621 0.34 +0.9
4,840,720 - MPMX20_04621 0.34 +1.2
4,840,722 - MPMX20_04621 0.34 -1.4
4,840,754 - MPMX20_04621 0.36 -0.6
4,840,759 - MPMX20_04621 0.36 -1.1
4,840,791 + MPMX20_04621 0.39 -1.2
4,840,844 - MPMX20_04621 0.42 -0.7
4,840,855 + MPMX20_04621 0.43 +1.3
4,840,855 - MPMX20_04621 0.43 +0.6
4,840,906 + MPMX20_04621 0.46 +0.2
4,840,959 - MPMX20_04621 0.50 -0.2
4,840,994 - MPMX20_04621 0.52 -0.0
4,840,996 + MPMX20_04621 0.52 +1.8
4,841,009 - MPMX20_04621 0.53 -1.2
4,841,011 - MPMX20_04621 0.53 +1.1
4,841,011 - MPMX20_04621 0.53 +0.7
4,841,016 - MPMX20_04621 0.54 +0.1
4,841,048 - MPMX20_04621 0.56 -0.4
4,841,082 + MPMX20_04621 0.58 -1.1
4,841,128 + MPMX20_04621 0.61 -0.7
4,841,131 - MPMX20_04621 0.61 +0.5
4,841,136 - MPMX20_04621 0.62 +0.9
4,841,155 - MPMX20_04621 0.63 -0.1
4,841,158 + MPMX20_04621 0.63 -1.2
4,841,166 - MPMX20_04621 0.64 +0.8
4,841,166 - MPMX20_04621 0.64 -0.4
4,841,188 + MPMX20_04621 0.65 -0.1
4,841,284 + MPMX20_04621 0.71 +0.4
4,841,289 + MPMX20_04621 0.72 -0.8
4,841,289 + MPMX20_04621 0.72 -0.3
4,841,289 + MPMX20_04621 0.72 -0.4
4,841,289 + MPMX20_04621 0.72 +0.2
4,841,303 - MPMX20_04621 0.73 +2.2
4,841,319 + MPMX20_04621 0.74 +0.3
4,841,319 + MPMX20_04621 0.74 +1.0
4,841,319 + MPMX20_04621 0.74 +0.5
4,841,319 + MPMX20_04621 0.74 -0.3
4,841,319 + MPMX20_04621 0.74 +0.4
4,841,319 + MPMX20_04621 0.74 -1.4
4,841,327 - MPMX20_04621 0.74 -0.1
4,841,327 - MPMX20_04621 0.74 +0.3
4,841,327 - MPMX20_04621 0.74 -1.5
4,841,327 - MPMX20_04621 0.74 +0.8
4,841,327 - MPMX20_04621 0.74 +0.6
4,841,327 - MPMX20_04621 0.74 +1.4
4,841,347 + MPMX20_04621 0.76 -0.5
4,841,353 - MPMX20_04621 0.76 +1.8
4,841,353 - MPMX20_04621 0.76 +0.3
4,841,445 + MPMX20_04621 0.82 -0.3
4,841,523 - MPMX20_04621 0.87 -1.5
4,841,533 - MPMX20_04621 0.88 -0.2
4,841,572 + -0.8
4,841,580 - +0.2
4,841,643 + -2.0
4,841,661 - +0.6
4,841,715 + -0.6
4,841,726 + +0.2
4,841,770 + +0.6
4,841,779 + -1.0
4,841,779 + +1.0
4,841,779 + -0.1
4,841,930 + MPMX20_04622 0.16 -0.1
4,841,930 + MPMX20_04622 0.16 +0.2
4,841,930 + MPMX20_04622 0.16 -0.6
4,841,930 + MPMX20_04622 0.16 +0.1
4,841,930 + MPMX20_04622 0.16 -0.3
4,841,938 - MPMX20_04622 0.16 +0.8
4,841,938 - MPMX20_04622 0.16 +1.0
4,841,986 + MPMX20_04622 0.19 +0.6
4,841,987 + MPMX20_04622 0.19 +0.2
4,842,073 + MPMX20_04622 0.25 +0.4
4,842,122 + MPMX20_04622 0.29 +0.8
4,842,122 + MPMX20_04622 0.29 +0.6
4,842,155 + MPMX20_04622 0.31 -0.1
4,842,163 + MPMX20_04622 0.32 +0.3
4,842,168 + MPMX20_04622 0.32 -0.1
4,842,186 - MPMX20_04622 0.33 -0.0
4,842,186 - MPMX20_04622 0.33 -0.0
4,842,201 - MPMX20_04622 0.34 -0.8
4,842,220 - MPMX20_04622 0.36 -0.3
4,842,249 + MPMX20_04622 0.38 -0.6
4,842,329 + MPMX20_04622 0.43 -1.4
4,842,357 + MPMX20_04622 0.45 +0.7
4,842,373 - MPMX20_04622 0.46 -0.9
4,842,373 - MPMX20_04622 0.46 -0.2
4,842,446 + MPMX20_04622 0.51 -0.4
4,842,519 + MPMX20_04622 0.56 -0.2
4,842,523 - MPMX20_04622 0.56 +0.9
4,842,570 + MPMX20_04622 0.60 +0.2
4,842,694 - MPMX20_04622 0.68 -0.4
4,842,703 - MPMX20_04622 0.69 +2.2
4,842,704 + MPMX20_04622 0.69 +0.2
4,842,712 - MPMX20_04622 0.69 +0.8
4,842,739 + MPMX20_04622 0.71 -2.4
4,842,742 - MPMX20_04622 0.71 +0.2
4,842,747 - MPMX20_04622 0.72 +1.2
4,842,747 - MPMX20_04622 0.72 -0.6
4,842,747 - MPMX20_04622 0.72 +1.1
4,842,747 - MPMX20_04622 0.72 -0.2
4,842,809 + MPMX20_04622 0.76 -1.1
4,842,822 - MPMX20_04622 0.77 -0.1
4,842,833 + MPMX20_04622 0.78 +0.9
4,842,833 + MPMX20_04622 0.78 -0.7
4,842,833 + MPMX20_04622 0.78 -0.7
4,842,883 + MPMX20_04622 0.81 +0.1
4,842,949 + MPMX20_04622 0.86 -1.2
4,843,012 - -0.1
4,843,022 - -1.1
4,843,027 + +0.5
4,843,035 - -1.0
4,843,056 - -0.6
4,843,094 + -0.2
4,843,096 - +0.6
4,843,139 + +0.0
4,843,209 + -1.2
4,843,217 - -0.9
4,843,260 + MPMX20_04623 0.10 -1.5
4,843,260 + MPMX20_04623 0.10 +0.3
4,843,260 + MPMX20_04623 0.10 -2.3
4,843,263 - MPMX20_04623 0.11 +0.5
4,843,287 - MPMX20_04623 0.13 +0.6
4,843,318 + MPMX20_04623 0.16 +0.4
4,843,448 - MPMX20_04623 0.29 -0.1
4,843,450 + MPMX20_04623 0.30 -0.2
4,843,624 + MPMX20_04623 0.47 +0.2
4,843,624 + MPMX20_04623 0.47 -0.6
4,843,632 + MPMX20_04623 0.48 +1.2
4,843,640 - MPMX20_04623 0.49 -0.1
4,843,640 - MPMX20_04623 0.49 -0.7
4,843,640 - MPMX20_04623 0.49 +1.3
4,843,701 - MPMX20_04623 0.55 -0.5
4,843,706 - MPMX20_04623 0.55 +0.4
4,843,770 + MPMX20_04623 0.62 +0.2
4,843,856 + MPMX20_04623 0.70 +0.4
4,843,862 - MPMX20_04623 0.71 -0.1
4,843,876 + MPMX20_04623 0.73 -0.4
4,843,884 - MPMX20_04623 0.73 -1.6
4,843,943 + MPMX20_04623 0.79 +3.2
4,843,951 - MPMX20_04623 0.80 -0.4
4,843,951 - MPMX20_04623 0.80 -0.9
4,844,014 - MPMX20_04623 0.86 -0.2
4,844,047 + MPMX20_04623 0.90 +0.7
4,844,072 - +1.0

Or see this region's nucleotide sequence