Experiment: Motility test in 1X LB; 1 day; outer cut; 0.3% agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04621 and MPMX20_04622 overlap by 7 nucleotides MPMX20_04622 and MPMX20_04623 are separated by 0 nucleotides
MPMX20_04621: MPMX20_04621 - ATPase RavA, at 4,840,214 to 4,841,710
_04621
MPMX20_04622: MPMX20_04622 - Protein ViaA, at 4,841,704 to 4,843,155
_04622
MPMX20_04623: MPMX20_04623 - Aspartate--ammonia ligase, at 4,843,156 to 4,844,148
_04623
Position (kb)
4841
4842
4843
4844 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4840.720 kb on - strand, within MPMX20_04621 at 4840.720 kb on - strand, within MPMX20_04621 at 4840.722 kb on - strand, within MPMX20_04621 at 4840.754 kb on - strand, within MPMX20_04621 at 4840.759 kb on - strand, within MPMX20_04621 at 4840.791 kb on + strand, within MPMX20_04621 at 4840.844 kb on - strand, within MPMX20_04621 at 4840.855 kb on + strand, within MPMX20_04621 at 4840.855 kb on - strand, within MPMX20_04621 at 4840.906 kb on + strand, within MPMX20_04621 at 4840.959 kb on - strand, within MPMX20_04621 at 4840.994 kb on - strand, within MPMX20_04621 at 4840.996 kb on + strand, within MPMX20_04621 at 4841.009 kb on - strand, within MPMX20_04621 at 4841.011 kb on - strand, within MPMX20_04621 at 4841.011 kb on - strand, within MPMX20_04621 at 4841.016 kb on - strand, within MPMX20_04621 at 4841.048 kb on - strand, within MPMX20_04621 at 4841.082 kb on + strand, within MPMX20_04621 at 4841.128 kb on + strand, within MPMX20_04621 at 4841.131 kb on - strand, within MPMX20_04621 at 4841.136 kb on - strand, within MPMX20_04621 at 4841.155 kb on - strand, within MPMX20_04621 at 4841.158 kb on + strand, within MPMX20_04621 at 4841.166 kb on - strand, within MPMX20_04621 at 4841.166 kb on - strand, within MPMX20_04621 at 4841.188 kb on + strand, within MPMX20_04621 at 4841.284 kb on + strand, within MPMX20_04621 at 4841.289 kb on + strand, within MPMX20_04621 at 4841.289 kb on + strand, within MPMX20_04621 at 4841.289 kb on + strand, within MPMX20_04621 at 4841.289 kb on + strand, within MPMX20_04621 at 4841.303 kb on - strand, within MPMX20_04621 at 4841.319 kb on + strand, within MPMX20_04621 at 4841.319 kb on + strand, within MPMX20_04621 at 4841.319 kb on + strand, within MPMX20_04621 at 4841.319 kb on + strand, within MPMX20_04621 at 4841.319 kb on + strand, within MPMX20_04621 at 4841.319 kb on + strand, within MPMX20_04621 at 4841.327 kb on - strand, within MPMX20_04621 at 4841.327 kb on - strand, within MPMX20_04621 at 4841.327 kb on - strand, within MPMX20_04621 at 4841.327 kb on - strand, within MPMX20_04621 at 4841.327 kb on - strand, within MPMX20_04621 at 4841.327 kb on - strand, within MPMX20_04621 at 4841.347 kb on + strand, within MPMX20_04621 at 4841.353 kb on - strand, within MPMX20_04621 at 4841.353 kb on - strand, within MPMX20_04621 at 4841.445 kb on + strand, within MPMX20_04621 at 4841.523 kb on - strand, within MPMX20_04621 at 4841.533 kb on - strand, within MPMX20_04621 at 4841.572 kb on + strand at 4841.580 kb on - strand at 4841.643 kb on + strand at 4841.661 kb on - strand at 4841.715 kb on + strand at 4841.726 kb on + strand at 4841.770 kb on + strand at 4841.779 kb on + strand at 4841.779 kb on + strand at 4841.779 kb on + strand at 4841.930 kb on + strand, within MPMX20_04622 at 4841.930 kb on + strand, within MPMX20_04622 at 4841.930 kb on + strand, within MPMX20_04622 at 4841.930 kb on + strand, within MPMX20_04622 at 4841.930 kb on + strand, within MPMX20_04622 at 4841.938 kb on - strand, within MPMX20_04622 at 4841.938 kb on - strand, within MPMX20_04622 at 4841.986 kb on + strand, within MPMX20_04622 at 4841.987 kb on + strand, within MPMX20_04622 at 4842.073 kb on + strand, within MPMX20_04622 at 4842.122 kb on + strand, within MPMX20_04622 at 4842.122 kb on + strand, within MPMX20_04622 at 4842.155 kb on + strand, within MPMX20_04622 at 4842.163 kb on + strand, within MPMX20_04622 at 4842.168 kb on + strand, within MPMX20_04622 at 4842.186 kb on - strand, within MPMX20_04622 at 4842.186 kb on - strand, within MPMX20_04622 at 4842.201 kb on - strand, within MPMX20_04622 at 4842.220 kb on - strand, within MPMX20_04622 at 4842.249 kb on + strand, within MPMX20_04622 at 4842.329 kb on + strand, within MPMX20_04622 at 4842.357 kb on + strand, within MPMX20_04622 at 4842.373 kb on - strand, within MPMX20_04622 at 4842.373 kb on - strand, within MPMX20_04622 at 4842.446 kb on + strand, within MPMX20_04622 at 4842.519 kb on + strand, within MPMX20_04622 at 4842.523 kb on - strand, within MPMX20_04622 at 4842.570 kb on + strand, within MPMX20_04622 at 4842.694 kb on - strand, within MPMX20_04622 at 4842.703 kb on - strand, within MPMX20_04622 at 4842.704 kb on + strand, within MPMX20_04622 at 4842.712 kb on - strand, within MPMX20_04622 at 4842.739 kb on + strand, within MPMX20_04622 at 4842.742 kb on - strand, within MPMX20_04622 at 4842.747 kb on - strand, within MPMX20_04622 at 4842.747 kb on - strand, within MPMX20_04622 at 4842.747 kb on - strand, within MPMX20_04622 at 4842.747 kb on - strand, within MPMX20_04622 at 4842.809 kb on + strand, within MPMX20_04622 at 4842.822 kb on - strand, within MPMX20_04622 at 4842.833 kb on + strand, within MPMX20_04622 at 4842.833 kb on + strand, within MPMX20_04622 at 4842.833 kb on + strand, within MPMX20_04622 at 4842.883 kb on + strand, within MPMX20_04622 at 4842.949 kb on + strand, within MPMX20_04622 at 4843.012 kb on - strand at 4843.022 kb on - strand at 4843.027 kb on + strand at 4843.035 kb on - strand at 4843.056 kb on - strand at 4843.094 kb on + strand at 4843.096 kb on - strand at 4843.139 kb on + strand at 4843.209 kb on + strand at 4843.217 kb on - strand at 4843.260 kb on + strand, within MPMX20_04623 at 4843.260 kb on + strand, within MPMX20_04623 at 4843.260 kb on + strand, within MPMX20_04623 at 4843.263 kb on - strand, within MPMX20_04623 at 4843.287 kb on - strand, within MPMX20_04623 at 4843.318 kb on + strand, within MPMX20_04623 at 4843.448 kb on - strand, within MPMX20_04623 at 4843.450 kb on + strand, within MPMX20_04623 at 4843.624 kb on + strand, within MPMX20_04623 at 4843.624 kb on + strand, within MPMX20_04623 at 4843.632 kb on + strand, within MPMX20_04623 at 4843.640 kb on - strand, within MPMX20_04623 at 4843.640 kb on - strand, within MPMX20_04623 at 4843.640 kb on - strand, within MPMX20_04623 at 4843.701 kb on - strand, within MPMX20_04623 at 4843.706 kb on - strand, within MPMX20_04623 at 4843.770 kb on + strand, within MPMX20_04623 at 4843.856 kb on + strand, within MPMX20_04623 at 4843.862 kb on - strand, within MPMX20_04623 at 4843.876 kb on + strand, within MPMX20_04623 at 4843.884 kb on - strand, within MPMX20_04623 at 4843.943 kb on + strand, within MPMX20_04623 at 4843.951 kb on - strand, within MPMX20_04623 at 4843.951 kb on - strand, within MPMX20_04623 at 4844.014 kb on - strand, within MPMX20_04623 at 4844.047 kb on + strand, within MPMX20_04623 at 4844.072 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; outer cut; 0.3% agar remove 4,840,720 - MPMX20_04621 0.34 +0.9 4,840,720 - MPMX20_04621 0.34 +1.2 4,840,722 - MPMX20_04621 0.34 -1.4 4,840,754 - MPMX20_04621 0.36 -0.6 4,840,759 - MPMX20_04621 0.36 -1.1 4,840,791 + MPMX20_04621 0.39 -1.2 4,840,844 - MPMX20_04621 0.42 -0.7 4,840,855 + MPMX20_04621 0.43 +1.3 4,840,855 - MPMX20_04621 0.43 +0.6 4,840,906 + MPMX20_04621 0.46 +0.2 4,840,959 - MPMX20_04621 0.50 -0.2 4,840,994 - MPMX20_04621 0.52 -0.0 4,840,996 + MPMX20_04621 0.52 +1.8 4,841,009 - MPMX20_04621 0.53 -1.2 4,841,011 - MPMX20_04621 0.53 +1.1 4,841,011 - MPMX20_04621 0.53 +0.7 4,841,016 - MPMX20_04621 0.54 +0.1 4,841,048 - MPMX20_04621 0.56 -0.4 4,841,082 + MPMX20_04621 0.58 -1.1 4,841,128 + MPMX20_04621 0.61 -0.7 4,841,131 - MPMX20_04621 0.61 +0.5 4,841,136 - MPMX20_04621 0.62 +0.9 4,841,155 - MPMX20_04621 0.63 -0.1 4,841,158 + MPMX20_04621 0.63 -1.2 4,841,166 - MPMX20_04621 0.64 +0.8 4,841,166 - MPMX20_04621 0.64 -0.4 4,841,188 + MPMX20_04621 0.65 -0.1 4,841,284 + MPMX20_04621 0.71 +0.4 4,841,289 + MPMX20_04621 0.72 -0.8 4,841,289 + MPMX20_04621 0.72 -0.3 4,841,289 + MPMX20_04621 0.72 -0.4 4,841,289 + MPMX20_04621 0.72 +0.2 4,841,303 - MPMX20_04621 0.73 +2.2 4,841,319 + MPMX20_04621 0.74 +0.3 4,841,319 + MPMX20_04621 0.74 +1.0 4,841,319 + MPMX20_04621 0.74 +0.5 4,841,319 + MPMX20_04621 0.74 -0.3 4,841,319 + MPMX20_04621 0.74 +0.4 4,841,319 + MPMX20_04621 0.74 -1.4 4,841,327 - MPMX20_04621 0.74 -0.1 4,841,327 - MPMX20_04621 0.74 +0.3 4,841,327 - MPMX20_04621 0.74 -1.5 4,841,327 - MPMX20_04621 0.74 +0.8 4,841,327 - MPMX20_04621 0.74 +0.6 4,841,327 - MPMX20_04621 0.74 +1.4 4,841,347 + MPMX20_04621 0.76 -0.5 4,841,353 - MPMX20_04621 0.76 +1.8 4,841,353 - MPMX20_04621 0.76 +0.3 4,841,445 + MPMX20_04621 0.82 -0.3 4,841,523 - MPMX20_04621 0.87 -1.5 4,841,533 - MPMX20_04621 0.88 -0.2 4,841,572 + -0.8 4,841,580 - +0.2 4,841,643 + -2.0 4,841,661 - +0.6 4,841,715 + -0.6 4,841,726 + +0.2 4,841,770 + +0.6 4,841,779 + -1.0 4,841,779 + +1.0 4,841,779 + -0.1 4,841,930 + MPMX20_04622 0.16 -0.1 4,841,930 + MPMX20_04622 0.16 +0.2 4,841,930 + MPMX20_04622 0.16 -0.6 4,841,930 + MPMX20_04622 0.16 +0.1 4,841,930 + MPMX20_04622 0.16 -0.3 4,841,938 - MPMX20_04622 0.16 +0.8 4,841,938 - MPMX20_04622 0.16 +1.0 4,841,986 + MPMX20_04622 0.19 +0.6 4,841,987 + MPMX20_04622 0.19 +0.2 4,842,073 + MPMX20_04622 0.25 +0.4 4,842,122 + MPMX20_04622 0.29 +0.8 4,842,122 + MPMX20_04622 0.29 +0.6 4,842,155 + MPMX20_04622 0.31 -0.1 4,842,163 + MPMX20_04622 0.32 +0.3 4,842,168 + MPMX20_04622 0.32 -0.1 4,842,186 - MPMX20_04622 0.33 -0.0 4,842,186 - MPMX20_04622 0.33 -0.0 4,842,201 - MPMX20_04622 0.34 -0.8 4,842,220 - MPMX20_04622 0.36 -0.3 4,842,249 + MPMX20_04622 0.38 -0.6 4,842,329 + MPMX20_04622 0.43 -1.4 4,842,357 + MPMX20_04622 0.45 +0.7 4,842,373 - MPMX20_04622 0.46 -0.9 4,842,373 - MPMX20_04622 0.46 -0.2 4,842,446 + MPMX20_04622 0.51 -0.4 4,842,519 + MPMX20_04622 0.56 -0.2 4,842,523 - MPMX20_04622 0.56 +0.9 4,842,570 + MPMX20_04622 0.60 +0.2 4,842,694 - MPMX20_04622 0.68 -0.4 4,842,703 - MPMX20_04622 0.69 +2.2 4,842,704 + MPMX20_04622 0.69 +0.2 4,842,712 - MPMX20_04622 0.69 +0.8 4,842,739 + MPMX20_04622 0.71 -2.4 4,842,742 - MPMX20_04622 0.71 +0.2 4,842,747 - MPMX20_04622 0.72 +1.2 4,842,747 - MPMX20_04622 0.72 -0.6 4,842,747 - MPMX20_04622 0.72 +1.1 4,842,747 - MPMX20_04622 0.72 -0.2 4,842,809 + MPMX20_04622 0.76 -1.1 4,842,822 - MPMX20_04622 0.77 -0.1 4,842,833 + MPMX20_04622 0.78 +0.9 4,842,833 + MPMX20_04622 0.78 -0.7 4,842,833 + MPMX20_04622 0.78 -0.7 4,842,883 + MPMX20_04622 0.81 +0.1 4,842,949 + MPMX20_04622 0.86 -1.2 4,843,012 - -0.1 4,843,022 - -1.1 4,843,027 + +0.5 4,843,035 - -1.0 4,843,056 - -0.6 4,843,094 + -0.2 4,843,096 - +0.6 4,843,139 + +0.0 4,843,209 + -1.2 4,843,217 - -0.9 4,843,260 + MPMX20_04623 0.10 -1.5 4,843,260 + MPMX20_04623 0.10 +0.3 4,843,260 + MPMX20_04623 0.10 -2.3 4,843,263 - MPMX20_04623 0.11 +0.5 4,843,287 - MPMX20_04623 0.13 +0.6 4,843,318 + MPMX20_04623 0.16 +0.4 4,843,448 - MPMX20_04623 0.29 -0.1 4,843,450 + MPMX20_04623 0.30 -0.2 4,843,624 + MPMX20_04623 0.47 +0.2 4,843,624 + MPMX20_04623 0.47 -0.6 4,843,632 + MPMX20_04623 0.48 +1.2 4,843,640 - MPMX20_04623 0.49 -0.1 4,843,640 - MPMX20_04623 0.49 -0.7 4,843,640 - MPMX20_04623 0.49 +1.3 4,843,701 - MPMX20_04623 0.55 -0.5 4,843,706 - MPMX20_04623 0.55 +0.4 4,843,770 + MPMX20_04623 0.62 +0.2 4,843,856 + MPMX20_04623 0.70 +0.4 4,843,862 - MPMX20_04623 0.71 -0.1 4,843,876 + MPMX20_04623 0.73 -0.4 4,843,884 - MPMX20_04623 0.73 -1.6 4,843,943 + MPMX20_04623 0.79 +3.2 4,843,951 - MPMX20_04623 0.80 -0.4 4,843,951 - MPMX20_04623 0.80 -0.9 4,844,014 - MPMX20_04623 0.86 -0.2 4,844,047 + MPMX20_04623 0.90 +0.7 4,844,072 - +1.0
Or see this region's nucleotide sequence