Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02938

Experiment: Motility test in 1X LB; 1 day; outer cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02936 and MPMX20_02937 overlap by 8 nucleotidesMPMX20_02937 and MPMX20_02938 overlap by 1 nucleotidesMPMX20_02938 and MPMX20_02939 are separated by 21 nucleotidesMPMX20_02939 and MPMX20_02940 overlap by 4 nucleotides MPMX20_02936: MPMX20_02936 - Flagellar motor switch protein FliG, at 3,066,609 to 3,067,607 _02936 MPMX20_02937: MPMX20_02937 - Flagellar assembly protein FliH, at 3,067,600 to 3,068,307 _02937 MPMX20_02938: MPMX20_02938 - Flagellum-specific ATP synthase, at 3,068,307 to 3,069,677 _02938 MPMX20_02939: MPMX20_02939 - Flagellar FliJ protein, at 3,069,699 to 3,070,142 _02939 MPMX20_02940: MPMX20_02940 - Flagellar hook-length control protein, at 3,070,139 to 3,071,377 _02940 Position (kb) 3068 3069 3070Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 3067.397 kb on + strand, within MPMX20_02936at 3067.441 kb on + strand, within MPMX20_02936at 3067.590 kb on + strandat 3067.590 kb on + strandat 3067.712 kb on + strand, within MPMX20_02937at 3067.714 kb on + strand, within MPMX20_02937at 3067.729 kb on + strand, within MPMX20_02937at 3067.737 kb on - strand, within MPMX20_02937at 3067.782 kb on + strand, within MPMX20_02937at 3067.798 kb on - strand, within MPMX20_02937at 3067.851 kb on - strand, within MPMX20_02937at 3067.855 kb on + strand, within MPMX20_02937at 3067.857 kb on - strand, within MPMX20_02937at 3067.868 kb on + strand, within MPMX20_02937at 3067.959 kb on - strand, within MPMX20_02937at 3067.961 kb on + strand, within MPMX20_02937at 3067.970 kb on + strand, within MPMX20_02937at 3067.978 kb on - strand, within MPMX20_02937at 3068.034 kb on + strand, within MPMX20_02937at 3068.034 kb on + strand, within MPMX20_02937at 3068.042 kb on - strand, within MPMX20_02937at 3068.088 kb on + strand, within MPMX20_02937at 3068.126 kb on + strand, within MPMX20_02937at 3068.127 kb on + strand, within MPMX20_02937at 3068.127 kb on + strand, within MPMX20_02937at 3068.220 kb on + strand, within MPMX20_02937at 3068.264 kb on + strandat 3068.301 kb on + strandat 3068.369 kb on + strandat 3068.436 kb on - strandat 3068.436 kb on - strandat 3068.485 kb on - strand, within MPMX20_02938at 3068.507 kb on - strand, within MPMX20_02938at 3068.548 kb on + strand, within MPMX20_02938at 3068.571 kb on - strand, within MPMX20_02938at 3068.576 kb on - strand, within MPMX20_02938at 3068.652 kb on - strand, within MPMX20_02938at 3068.652 kb on - strand, within MPMX20_02938at 3068.662 kb on - strand, within MPMX20_02938at 3068.693 kb on - strand, within MPMX20_02938at 3068.744 kb on + strand, within MPMX20_02938at 3068.744 kb on + strand, within MPMX20_02938at 3068.744 kb on + strand, within MPMX20_02938at 3068.749 kb on + strand, within MPMX20_02938at 3068.752 kb on + strand, within MPMX20_02938at 3068.752 kb on - strand, within MPMX20_02938at 3068.752 kb on - strand, within MPMX20_02938at 3068.754 kb on + strand, within MPMX20_02938at 3068.762 kb on - strand, within MPMX20_02938at 3068.762 kb on - strand, within MPMX20_02938at 3068.842 kb on - strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.877 kb on - strand, within MPMX20_02938at 3068.901 kb on + strand, within MPMX20_02938at 3068.901 kb on + strand, within MPMX20_02938at 3068.925 kb on + strand, within MPMX20_02938at 3068.997 kb on - strand, within MPMX20_02938at 3069.050 kb on + strand, within MPMX20_02938at 3069.122 kb on + strand, within MPMX20_02938at 3069.124 kb on + strand, within MPMX20_02938at 3069.425 kb on - strand, within MPMX20_02938at 3069.494 kb on - strand, within MPMX20_02938at 3069.504 kb on - strand, within MPMX20_02938at 3069.511 kb on - strand, within MPMX20_02938at 3069.523 kb on + strand, within MPMX20_02938at 3069.523 kb on + strand, within MPMX20_02938at 3069.531 kb on - strand, within MPMX20_02938at 3069.531 kb on - strand, within MPMX20_02938at 3069.531 kb on - strand, within MPMX20_02938at 3069.636 kb on + strandat 3069.636 kb on + strandat 3069.636 kb on + strandat 3069.644 kb on - strandat 3069.680 kb on - strandat 3069.690 kb on - strandat 3069.710 kb on - strandat 3069.783 kb on - strand, within MPMX20_02939at 3069.854 kb on + strand, within MPMX20_02939at 3069.854 kb on + strand, within MPMX20_02939at 3069.854 kb on + strand, within MPMX20_02939at 3069.862 kb on - strand, within MPMX20_02939at 3069.862 kb on - strand, within MPMX20_02939at 3069.862 kb on - strand, within MPMX20_02939at 3069.868 kb on + strand, within MPMX20_02939at 3069.888 kb on - strand, within MPMX20_02939at 3070.105 kb on + strandat 3070.113 kb on - strandat 3070.113 kb on - strandat 3070.237 kb on + strandat 3070.273 kb on - strand, within MPMX20_02940at 3070.322 kb on - strand, within MPMX20_02940at 3070.332 kb on - strand, within MPMX20_02940at 3070.332 kb on - strand, within MPMX20_02940at 3070.347 kb on - strand, within MPMX20_02940at 3070.356 kb on + strand, within MPMX20_02940at 3070.398 kb on - strand, within MPMX20_02940at 3070.403 kb on - strand, within MPMX20_02940at 3070.484 kb on - strand, within MPMX20_02940at 3070.554 kb on + strand, within MPMX20_02940at 3070.561 kb on - strand, within MPMX20_02940

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; outer cut; 0.3% agar
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3,067,397 + MPMX20_02936 0.79 -4.1
3,067,441 + MPMX20_02936 0.83 -3.5
3,067,590 + -2.3
3,067,590 + -4.7
3,067,712 + MPMX20_02937 0.16 -1.7
3,067,714 + MPMX20_02937 0.16 -4.5
3,067,729 + MPMX20_02937 0.18 -3.6
3,067,737 - MPMX20_02937 0.19 -5.3
3,067,782 + MPMX20_02937 0.26 -4.8
3,067,798 - MPMX20_02937 0.28 -4.3
3,067,851 - MPMX20_02937 0.35 -1.6
3,067,855 + MPMX20_02937 0.36 -2.4
3,067,857 - MPMX20_02937 0.36 -4.2
3,067,868 + MPMX20_02937 0.38 -3.3
3,067,959 - MPMX20_02937 0.51 -4.3
3,067,961 + MPMX20_02937 0.51 -4.0
3,067,970 + MPMX20_02937 0.52 -3.8
3,067,978 - MPMX20_02937 0.53 -5.1
3,068,034 + MPMX20_02937 0.61 -2.6
3,068,034 + MPMX20_02937 0.61 -5.5
3,068,042 - MPMX20_02937 0.62 -1.9
3,068,088 + MPMX20_02937 0.69 -1.9
3,068,126 + MPMX20_02937 0.74 -4.8
3,068,127 + MPMX20_02937 0.74 -3.3
3,068,127 + MPMX20_02937 0.74 -2.1
3,068,220 + MPMX20_02937 0.88 -3.9
3,068,264 + -3.3
3,068,301 + -3.5
3,068,369 + +1.3
3,068,436 - -4.3
3,068,436 - -5.0
3,068,485 - MPMX20_02938 0.13 -1.9
3,068,507 - MPMX20_02938 0.15 -3.8
3,068,548 + MPMX20_02938 0.18 -2.2
3,068,571 - MPMX20_02938 0.19 -2.6
3,068,576 - MPMX20_02938 0.20 -3.4
3,068,652 - MPMX20_02938 0.25 -3.4
3,068,652 - MPMX20_02938 0.25 -1.3
3,068,662 - MPMX20_02938 0.26 -4.3
3,068,693 - MPMX20_02938 0.28 -3.1
3,068,744 + MPMX20_02938 0.32 -1.7
3,068,744 + MPMX20_02938 0.32 -3.7
3,068,744 + MPMX20_02938 0.32 +0.3
3,068,749 + MPMX20_02938 0.32 -2.9
3,068,752 + MPMX20_02938 0.32 -3.8
3,068,752 - MPMX20_02938 0.32 -3.7
3,068,752 - MPMX20_02938 0.32 -1.3
3,068,754 + MPMX20_02938 0.33 -2.3
3,068,762 - MPMX20_02938 0.33 -5.1
3,068,762 - MPMX20_02938 0.33 -1.9
3,068,842 - MPMX20_02938 0.39 -2.3
3,068,854 + MPMX20_02938 0.40 -4.5
3,068,854 + MPMX20_02938 0.40 -4.7
3,068,854 + MPMX20_02938 0.40 -3.1
3,068,854 + MPMX20_02938 0.40 -3.6
3,068,877 - MPMX20_02938 0.42 -2.4
3,068,901 + MPMX20_02938 0.43 -2.7
3,068,901 + MPMX20_02938 0.43 +1.3
3,068,925 + MPMX20_02938 0.45 -2.1
3,068,997 - MPMX20_02938 0.50 -5.0
3,069,050 + MPMX20_02938 0.54 -3.2
3,069,122 + MPMX20_02938 0.59 -4.2
3,069,124 + MPMX20_02938 0.60 -3.9
3,069,425 - MPMX20_02938 0.82 -2.4
3,069,494 - MPMX20_02938 0.87 -2.3
3,069,504 - MPMX20_02938 0.87 -4.7
3,069,511 - MPMX20_02938 0.88 -2.3
3,069,523 + MPMX20_02938 0.89 -4.2
3,069,523 + MPMX20_02938 0.89 -4.8
3,069,531 - MPMX20_02938 0.89 -4.9
3,069,531 - MPMX20_02938 0.89 -2.8
3,069,531 - MPMX20_02938 0.89 -2.4
3,069,636 + -3.6
3,069,636 + -1.6
3,069,636 + -4.0
3,069,644 - -3.6
3,069,680 - +0.1
3,069,690 - -1.3
3,069,710 - -4.4
3,069,783 - MPMX20_02939 0.19 +0.3
3,069,854 + MPMX20_02939 0.35 -3.7
3,069,854 + MPMX20_02939 0.35 -0.7
3,069,854 + MPMX20_02939 0.35 -3.9
3,069,862 - MPMX20_02939 0.37 -2.2
3,069,862 - MPMX20_02939 0.37 -3.7
3,069,862 - MPMX20_02939 0.37 -3.7
3,069,868 + MPMX20_02939 0.38 -5.4
3,069,888 - MPMX20_02939 0.43 -4.1
3,070,105 + -0.3
3,070,113 - -4.0
3,070,113 - -4.1
3,070,237 + -2.1
3,070,273 - MPMX20_02940 0.11 -4.4
3,070,322 - MPMX20_02940 0.15 -3.0
3,070,332 - MPMX20_02940 0.16 +1.3
3,070,332 - MPMX20_02940 0.16 -4.4
3,070,347 - MPMX20_02940 0.17 -4.6
3,070,356 + MPMX20_02940 0.18 -1.3
3,070,398 - MPMX20_02940 0.21 -1.3
3,070,403 - MPMX20_02940 0.21 -6.1
3,070,484 - MPMX20_02940 0.28 -4.9
3,070,554 + MPMX20_02940 0.33 -4.4
3,070,561 - MPMX20_02940 0.34 -3.3

Or see this region's nucleotide sequence