Experiment: Motility test in 1X LB; 1 day; outer cut; 0.3% agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00834 and MPMX20_00835 are separated by 176 nucleotides MPMX20_00835 and MPMX20_00836 are separated by 229 nucleotides
MPMX20_00834: MPMX20_00834 - ATP-dependent RNA helicase HrpB, at 875,085 to 877,514
_00834
MPMX20_00835: MPMX20_00835 - Penicillin-binding protein 1B, at 877,691 to 880,216
_00835
MPMX20_00836: MPMX20_00836 - Ferrichrome outer membrane transporter/phage receptor, at 880,446 to 882,665
_00836
Position (kb) 877
878
879
880
881 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 876.693 kb on + strand, within MPMX20_00834 at 876.701 kb on + strand, within MPMX20_00834 at 876.803 kb on + strand, within MPMX20_00834 at 876.834 kb on - strand, within MPMX20_00834 at 876.936 kb on + strand, within MPMX20_00834 at 876.942 kb on + strand, within MPMX20_00834 at 876.942 kb on + strand, within MPMX20_00834 at 876.943 kb on + strand, within MPMX20_00834 at 876.950 kb on - strand, within MPMX20_00834 at 876.959 kb on - strand, within MPMX20_00834 at 876.983 kb on - strand, within MPMX20_00834 at 876.998 kb on - strand, within MPMX20_00834 at 877.008 kb on - strand, within MPMX20_00834 at 877.020 kb on + strand, within MPMX20_00834 at 877.020 kb on + strand, within MPMX20_00834 at 877.028 kb on - strand, within MPMX20_00834 at 877.028 kb on - strand, within MPMX20_00834 at 877.028 kb on - strand, within MPMX20_00834 at 877.053 kb on + strand, within MPMX20_00834 at 877.065 kb on + strand, within MPMX20_00834 at 877.096 kb on + strand, within MPMX20_00834 at 877.096 kb on + strand, within MPMX20_00834 at 877.096 kb on + strand, within MPMX20_00834 at 877.096 kb on + strand, within MPMX20_00834 at 877.096 kb on + strand, within MPMX20_00834 at 877.096 kb on + strand, within MPMX20_00834 at 877.096 kb on + strand, within MPMX20_00834 at 877.104 kb on - strand, within MPMX20_00834 at 877.104 kb on - strand, within MPMX20_00834 at 877.104 kb on - strand, within MPMX20_00834 at 877.104 kb on - strand, within MPMX20_00834 at 877.176 kb on + strand, within MPMX20_00834 at 877.184 kb on - strand, within MPMX20_00834 at 877.197 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.199 kb on + strand, within MPMX20_00834 at 877.204 kb on + strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.207 kb on - strand, within MPMX20_00834 at 877.335 kb on - strand at 877.359 kb on - strand at 877.419 kb on - strand at 877.452 kb on - strand at 877.516 kb on + strand at 877.530 kb on - strand at 877.551 kb on + strand at 877.551 kb on + strand at 877.588 kb on + strand at 877.605 kb on - strand at 877.719 kb on + strand at 877.771 kb on + strand at 877.771 kb on + strand at 877.778 kb on + strand at 877.806 kb on - strand at 877.854 kb on + strand at 877.946 kb on - strand, within MPMX20_00835 at 878.011 kb on - strand, within MPMX20_00835 at 878.011 kb on - strand, within MPMX20_00835 at 878.011 kb on - strand, within MPMX20_00835 at 878.011 kb on - strand, within MPMX20_00835 at 878.025 kb on - strand, within MPMX20_00835 at 878.076 kb on - strand, within MPMX20_00835 at 878.084 kb on - strand, within MPMX20_00835 at 878.095 kb on + strand, within MPMX20_00835 at 878.147 kb on - strand, within MPMX20_00835 at 878.194 kb on - strand, within MPMX20_00835 at 878.194 kb on - strand, within MPMX20_00835 at 878.209 kb on - strand, within MPMX20_00835 at 878.209 kb on - strand, within MPMX20_00835 at 878.222 kb on + strand, within MPMX20_00835 at 878.230 kb on - strand, within MPMX20_00835 at 878.230 kb on - strand, within MPMX20_00835 at 878.307 kb on - strand, within MPMX20_00835 at 878.349 kb on + strand, within MPMX20_00835 at 878.412 kb on + strand, within MPMX20_00835 at 878.441 kb on + strand, within MPMX20_00835 at 878.449 kb on - strand, within MPMX20_00835 at 878.452 kb on + strand, within MPMX20_00835 at 878.471 kb on + strand, within MPMX20_00835 at 878.560 kb on + strand, within MPMX20_00835 at 878.612 kb on - strand, within MPMX20_00835 at 878.612 kb on - strand, within MPMX20_00835 at 878.710 kb on + strand, within MPMX20_00835 at 878.715 kb on + strand, within MPMX20_00835 at 878.715 kb on + strand, within MPMX20_00835 at 878.723 kb on - strand, within MPMX20_00835 at 878.734 kb on + strand, within MPMX20_00835 at 878.782 kb on + strand, within MPMX20_00835 at 878.808 kb on + strand, within MPMX20_00835 at 878.863 kb on - strand, within MPMX20_00835 at 878.886 kb on + strand, within MPMX20_00835 at 878.975 kb on - strand, within MPMX20_00835 at 878.982 kb on - strand, within MPMX20_00835 at 879.086 kb on - strand, within MPMX20_00835 at 879.086 kb on - strand, within MPMX20_00835 at 879.129 kb on - strand, within MPMX20_00835 at 879.156 kb on + strand, within MPMX20_00835 at 879.176 kb on + strand, within MPMX20_00835 at 879.176 kb on + strand, within MPMX20_00835 at 879.176 kb on + strand, within MPMX20_00835 at 879.176 kb on + strand, within MPMX20_00835 at 879.176 kb on + strand, within MPMX20_00835 at 879.184 kb on - strand, within MPMX20_00835 at 879.184 kb on - strand, within MPMX20_00835 at 879.184 kb on - strand, within MPMX20_00835 at 879.184 kb on - strand, within MPMX20_00835 at 879.256 kb on + strand, within MPMX20_00835 at 879.263 kb on - strand, within MPMX20_00835 at 879.325 kb on + strand, within MPMX20_00835 at 879.325 kb on + strand, within MPMX20_00835 at 879.335 kb on + strand, within MPMX20_00835 at 879.370 kb on - strand, within MPMX20_00835 at 879.383 kb on + strand, within MPMX20_00835 at 879.383 kb on + strand, within MPMX20_00835 at 879.388 kb on + strand, within MPMX20_00835 at 879.391 kb on - strand, within MPMX20_00835 at 879.439 kb on + strand, within MPMX20_00835 at 879.449 kb on + strand, within MPMX20_00835 at 879.495 kb on - strand, within MPMX20_00835 at 879.554 kb on + strand, within MPMX20_00835 at 879.561 kb on - strand, within MPMX20_00835 at 879.562 kb on - strand, within MPMX20_00835 at 879.582 kb on + strand, within MPMX20_00835 at 879.604 kb on - strand, within MPMX20_00835 at 879.609 kb on - strand, within MPMX20_00835 at 879.632 kb on - strand, within MPMX20_00835 at 879.632 kb on - strand, within MPMX20_00835 at 879.632 kb on - strand, within MPMX20_00835 at 879.632 kb on - strand, within MPMX20_00835 at 879.642 kb on - strand, within MPMX20_00835 at 879.643 kb on - strand, within MPMX20_00835 at 879.770 kb on + strand, within MPMX20_00835 at 879.825 kb on + strand, within MPMX20_00835 at 879.849 kb on - strand, within MPMX20_00835 at 879.913 kb on + strand, within MPMX20_00835 at 880.024 kb on + strand at 880.110 kb on + strand at 880.110 kb on + strand at 880.209 kb on - strand at 880.219 kb on - strand at 880.219 kb on - strand at 880.290 kb on + strand at 880.298 kb on - strand at 880.334 kb on - strand at 880.445 kb on - strand at 880.454 kb on + strand at 880.454 kb on + strand at 880.454 kb on + strand at 880.462 kb on - strand at 880.462 kb on - strand at 880.462 kb on - strand at 880.462 kb on - strand at 880.462 kb on - strand at 880.462 kb on - strand at 880.694 kb on + strand, within MPMX20_00836 at 880.694 kb on + strand, within MPMX20_00836 at 880.702 kb on - strand, within MPMX20_00836 at 880.760 kb on + strand, within MPMX20_00836 at 880.762 kb on + strand, within MPMX20_00836 at 880.768 kb on - strand, within MPMX20_00836 at 880.768 kb on - strand, within MPMX20_00836 at 880.770 kb on - strand, within MPMX20_00836 at 880.770 kb on - strand, within MPMX20_00836 at 880.804 kb on + strand, within MPMX20_00836 at 880.804 kb on + strand, within MPMX20_00836 at 880.804 kb on + strand, within MPMX20_00836 at 880.812 kb on - strand, within MPMX20_00836 at 880.812 kb on - strand, within MPMX20_00836 at 880.812 kb on - strand, within MPMX20_00836 at 880.852 kb on + strand, within MPMX20_00836 at 880.922 kb on - strand, within MPMX20_00836 at 880.957 kb on + strand, within MPMX20_00836 at 880.957 kb on + strand, within MPMX20_00836 at 881.059 kb on + strand, within MPMX20_00836 at 881.067 kb on - strand, within MPMX20_00836 at 881.145 kb on - strand, within MPMX20_00836 at 881.160 kb on + strand, within MPMX20_00836 at 881.203 kb on + strand, within MPMX20_00836 at 881.203 kb on + strand, within MPMX20_00836 at 881.211 kb on - strand, within MPMX20_00836
Per-strain Table
Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; outer cut; 0.3% agar remove 876,693 + MPMX20_00834 0.66 +0.0 876,701 + MPMX20_00834 0.67 +0.5 876,803 + MPMX20_00834 0.71 -1.1 876,834 - MPMX20_00834 0.72 +0.5 876,936 + MPMX20_00834 0.76 +0.6 876,942 + MPMX20_00834 0.76 -0.1 876,942 + MPMX20_00834 0.76 -0.8 876,943 + MPMX20_00834 0.76 +0.2 876,950 - MPMX20_00834 0.77 +0.3 876,959 - MPMX20_00834 0.77 -0.4 876,983 - MPMX20_00834 0.78 -0.5 876,998 - MPMX20_00834 0.79 -1.1 877,008 - MPMX20_00834 0.79 -3.0 877,020 + MPMX20_00834 0.80 -0.4 877,020 + MPMX20_00834 0.80 +1.2 877,028 - MPMX20_00834 0.80 +0.4 877,028 - MPMX20_00834 0.80 -0.8 877,028 - MPMX20_00834 0.80 -0.2 877,053 + MPMX20_00834 0.81 +0.9 877,065 + MPMX20_00834 0.81 +1.0 877,096 + MPMX20_00834 0.83 +1.8 877,096 + MPMX20_00834 0.83 +1.4 877,096 + MPMX20_00834 0.83 +0.6 877,096 + MPMX20_00834 0.83 -0.5 877,096 + MPMX20_00834 0.83 +2.6 877,096 + MPMX20_00834 0.83 +0.8 877,096 + MPMX20_00834 0.83 -0.3 877,104 - MPMX20_00834 0.83 +0.4 877,104 - MPMX20_00834 0.83 +2.0 877,104 - MPMX20_00834 0.83 -1.2 877,104 - MPMX20_00834 0.83 +1.8 877,176 + MPMX20_00834 0.86 -0.3 877,184 - MPMX20_00834 0.86 -0.5 877,197 + MPMX20_00834 0.87 -0.7 877,199 + MPMX20_00834 0.87 -1.0 877,199 + MPMX20_00834 0.87 -1.6 877,199 + MPMX20_00834 0.87 -0.3 877,199 + MPMX20_00834 0.87 +0.8 877,199 + MPMX20_00834 0.87 -0.5 877,199 + MPMX20_00834 0.87 -0.9 877,199 + MPMX20_00834 0.87 +0.0 877,199 + MPMX20_00834 0.87 +1.0 877,199 + MPMX20_00834 0.87 +0.3 877,199 + MPMX20_00834 0.87 +0.8 877,199 + MPMX20_00834 0.87 +0.7 877,204 + MPMX20_00834 0.87 -1.1 877,207 - MPMX20_00834 0.87 +0.0 877,207 - MPMX20_00834 0.87 -0.3 877,207 - MPMX20_00834 0.87 +2.0 877,207 - MPMX20_00834 0.87 -0.4 877,207 - MPMX20_00834 0.87 +0.5 877,207 - MPMX20_00834 0.87 -1.4 877,207 - MPMX20_00834 0.87 -0.7 877,207 - MPMX20_00834 0.87 -0.2 877,207 - MPMX20_00834 0.87 -0.2 877,207 - MPMX20_00834 0.87 +0.1 877,207 - MPMX20_00834 0.87 +0.5 877,207 - MPMX20_00834 0.87 +0.9 877,335 - +1.0 877,359 - +0.7 877,419 - +1.6 877,452 - -0.8 877,516 + +0.5 877,530 - +1.8 877,551 + +0.4 877,551 + -0.0 877,588 + -0.4 877,605 - -0.7 877,719 + -0.1 877,771 + -1.1 877,771 + -0.4 877,778 + -3.5 877,806 - -0.8 877,854 + +0.4 877,946 - MPMX20_00835 0.10 -1.3 878,011 - MPMX20_00835 0.13 -0.7 878,011 - MPMX20_00835 0.13 -0.5 878,011 - MPMX20_00835 0.13 -2.9 878,011 - MPMX20_00835 0.13 +1.0 878,025 - MPMX20_00835 0.13 -2.3 878,076 - MPMX20_00835 0.15 -1.7 878,084 - MPMX20_00835 0.16 -0.6 878,095 + MPMX20_00835 0.16 -2.4 878,147 - MPMX20_00835 0.18 -1.1 878,194 - MPMX20_00835 0.20 -0.5 878,194 - MPMX20_00835 0.20 -1.7 878,209 - MPMX20_00835 0.21 -2.6 878,209 - MPMX20_00835 0.21 -1.8 878,222 + MPMX20_00835 0.21 -1.3 878,230 - MPMX20_00835 0.21 -0.8 878,230 - MPMX20_00835 0.21 -0.3 878,307 - MPMX20_00835 0.24 +0.2 878,349 + MPMX20_00835 0.26 -0.5 878,412 + MPMX20_00835 0.29 -2.1 878,441 + MPMX20_00835 0.30 -1.4 878,449 - MPMX20_00835 0.30 -0.3 878,452 + MPMX20_00835 0.30 -1.4 878,471 + MPMX20_00835 0.31 +0.7 878,560 + MPMX20_00835 0.34 -1.5 878,612 - MPMX20_00835 0.36 +1.0 878,612 - MPMX20_00835 0.36 +0.0 878,710 + MPMX20_00835 0.40 -0.6 878,715 + MPMX20_00835 0.41 -1.0 878,715 + MPMX20_00835 0.41 -0.3 878,723 - MPMX20_00835 0.41 -1.8 878,734 + MPMX20_00835 0.41 -0.9 878,782 + MPMX20_00835 0.43 -1.6 878,808 + MPMX20_00835 0.44 -1.0 878,863 - MPMX20_00835 0.46 -1.9 878,886 + MPMX20_00835 0.47 +0.3 878,975 - MPMX20_00835 0.51 -2.3 878,982 - MPMX20_00835 0.51 -0.4 879,086 - MPMX20_00835 0.55 -0.5 879,086 - MPMX20_00835 0.55 -1.3 879,129 - MPMX20_00835 0.57 +0.5 879,156 + MPMX20_00835 0.58 -1.7 879,176 + MPMX20_00835 0.59 -0.7 879,176 + MPMX20_00835 0.59 -0.5 879,176 + MPMX20_00835 0.59 -1.2 879,176 + MPMX20_00835 0.59 -0.8 879,176 + MPMX20_00835 0.59 -1.9 879,184 - MPMX20_00835 0.59 +0.1 879,184 - MPMX20_00835 0.59 -1.8 879,184 - MPMX20_00835 0.59 +0.2 879,184 - MPMX20_00835 0.59 -0.8 879,256 + MPMX20_00835 0.62 +0.2 879,263 - MPMX20_00835 0.62 -1.6 879,325 + MPMX20_00835 0.65 -1.1 879,325 + MPMX20_00835 0.65 -0.1 879,335 + MPMX20_00835 0.65 +0.8 879,370 - MPMX20_00835 0.66 -2.5 879,383 + MPMX20_00835 0.67 -1.1 879,383 + MPMX20_00835 0.67 -1.4 879,388 + MPMX20_00835 0.67 +2.0 879,391 - MPMX20_00835 0.67 -0.8 879,439 + MPMX20_00835 0.69 -0.7 879,449 + MPMX20_00835 0.70 -2.5 879,495 - MPMX20_00835 0.71 -1.9 879,554 + MPMX20_00835 0.74 +0.7 879,561 - MPMX20_00835 0.74 -0.4 879,562 - MPMX20_00835 0.74 -1.0 879,582 + MPMX20_00835 0.75 -3.5 879,604 - MPMX20_00835 0.76 +0.0 879,609 - MPMX20_00835 0.76 -1.1 879,632 - MPMX20_00835 0.77 -0.1 879,632 - MPMX20_00835 0.77 -1.7 879,632 - MPMX20_00835 0.77 -1.5 879,632 - MPMX20_00835 0.77 +0.3 879,642 - MPMX20_00835 0.77 -0.3 879,643 - MPMX20_00835 0.77 -0.5 879,770 + MPMX20_00835 0.82 +0.0 879,825 + MPMX20_00835 0.84 -0.3 879,849 - MPMX20_00835 0.85 -2.1 879,913 + MPMX20_00835 0.88 +0.0 880,024 + -0.4 880,110 + -0.8 880,110 + +0.6 880,209 - -0.4 880,219 - +1.0 880,219 - +0.3 880,290 + +0.0 880,298 - -0.7 880,334 - -0.5 880,445 - -0.3 880,454 + -0.5 880,454 + -0.8 880,454 + -0.2 880,462 - +2.0 880,462 - +0.7 880,462 - -0.3 880,462 - -0.5 880,462 - +1.7 880,462 - +1.8 880,694 + MPMX20_00836 0.11 +1.6 880,694 + MPMX20_00836 0.11 -0.1 880,702 - MPMX20_00836 0.12 +0.5 880,760 + MPMX20_00836 0.14 +0.4 880,762 + MPMX20_00836 0.14 +0.7 880,768 - MPMX20_00836 0.15 +0.2 880,768 - MPMX20_00836 0.15 +0.3 880,770 - MPMX20_00836 0.15 -0.0 880,770 - MPMX20_00836 0.15 +1.6 880,804 + MPMX20_00836 0.16 -1.5 880,804 + MPMX20_00836 0.16 +0.0 880,804 + MPMX20_00836 0.16 +0.0 880,812 - MPMX20_00836 0.16 -0.3 880,812 - MPMX20_00836 0.16 +1.7 880,812 - MPMX20_00836 0.16 +0.1 880,852 + MPMX20_00836 0.18 -0.5 880,922 - MPMX20_00836 0.21 -1.5 880,957 + MPMX20_00836 0.23 -0.4 880,957 + MPMX20_00836 0.23 -0.3 881,059 + MPMX20_00836 0.28 -0.8 881,067 - MPMX20_00836 0.28 +0.0 881,145 - MPMX20_00836 0.31 -0.2 881,160 + MPMX20_00836 0.32 -1.0 881,203 + MPMX20_00836 0.34 -0.8 881,203 + MPMX20_00836 0.34 -1.5 881,211 - MPMX20_00836 0.34 +2.6
Or see this region's nucleotide sequence