Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04102

Experiment: Motility test in 1X LB; 1 day; outer cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04101 and MPMX20_04102 are separated by 231 nucleotidesMPMX20_04102 and MPMX20_04103 are separated by 13 nucleotides MPMX20_04101: MPMX20_04101 - Intermembrane phospholipid transport system ATP-binding protein MlaF, at 4,295,370 to 4,296,182 _04101 MPMX20_04102: MPMX20_04102 - Inner membrane protein YrbG, at 4,296,414 to 4,297,391 _04102 MPMX20_04103: MPMX20_04103 - Arabinose 5-phosphate isomerase KdsD, at 4,297,405 to 4,298,391 _04103 Position (kb) 4296 4297 4298Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4295.426 kb on + strandat 4295.426 kb on + strandat 4295.434 kb on - strandat 4295.434 kb on - strandat 4295.434 kb on - strandat 4295.457 kb on + strand, within MPMX20_04101at 4295.527 kb on + strand, within MPMX20_04101at 4295.615 kb on + strand, within MPMX20_04101at 4295.615 kb on + strand, within MPMX20_04101at 4295.623 kb on - strand, within MPMX20_04101at 4295.626 kb on + strand, within MPMX20_04101at 4295.626 kb on + strand, within MPMX20_04101at 4295.626 kb on + strand, within MPMX20_04101at 4295.634 kb on - strand, within MPMX20_04101at 4295.654 kb on + strand, within MPMX20_04101at 4295.655 kb on + strand, within MPMX20_04101at 4295.750 kb on + strand, within MPMX20_04101at 4295.758 kb on - strand, within MPMX20_04101at 4295.799 kb on - strand, within MPMX20_04101at 4295.892 kb on + strand, within MPMX20_04101at 4295.919 kb on + strand, within MPMX20_04101at 4295.936 kb on + strand, within MPMX20_04101at 4295.936 kb on + strand, within MPMX20_04101at 4295.938 kb on + strand, within MPMX20_04101at 4295.940 kb on + strand, within MPMX20_04101at 4295.944 kb on - strand, within MPMX20_04101at 4295.946 kb on - strand, within MPMX20_04101at 4296.070 kb on + strand, within MPMX20_04101at 4296.188 kb on + strandat 4296.222 kb on + strandat 4296.232 kb on + strandat 4296.232 kb on + strandat 4296.240 kb on - strandat 4296.337 kb on + strandat 4296.337 kb on + strandat 4296.337 kb on + strandat 4296.338 kb on + strandat 4296.345 kb on - strandat 4296.345 kb on - strandat 4296.347 kb on + strandat 4296.349 kb on + strandat 4296.349 kb on + strandat 4296.352 kb on - strandat 4296.352 kb on - strandat 4296.371 kb on - strandat 4296.458 kb on + strandat 4296.458 kb on + strandat 4296.461 kb on + strandat 4296.461 kb on + strandat 4296.469 kb on - strandat 4296.469 kb on - strandat 4296.469 kb on - strandat 4296.469 kb on - strandat 4296.490 kb on + strandat 4296.490 kb on + strandat 4296.498 kb on - strandat 4296.503 kb on - strandat 4296.519 kb on - strand, within MPMX20_04102at 4296.540 kb on + strand, within MPMX20_04102at 4296.543 kb on - strand, within MPMX20_04102at 4296.614 kb on - strand, within MPMX20_04102at 4296.636 kb on + strand, within MPMX20_04102at 4296.656 kb on - strand, within MPMX20_04102at 4296.664 kb on + strand, within MPMX20_04102at 4296.671 kb on - strand, within MPMX20_04102at 4296.672 kb on - strand, within MPMX20_04102at 4296.686 kb on - strand, within MPMX20_04102at 4296.750 kb on - strand, within MPMX20_04102at 4296.757 kb on - strand, within MPMX20_04102at 4296.793 kb on - strand, within MPMX20_04102at 4296.881 kb on - strand, within MPMX20_04102at 4296.881 kb on - strand, within MPMX20_04102at 4297.008 kb on - strand, within MPMX20_04102at 4297.050 kb on - strand, within MPMX20_04102at 4297.088 kb on + strand, within MPMX20_04102at 4297.144 kb on - strand, within MPMX20_04102at 4297.184 kb on - strand, within MPMX20_04102at 4297.185 kb on - strand, within MPMX20_04102at 4297.196 kb on + strand, within MPMX20_04102at 4297.204 kb on - strand, within MPMX20_04102at 4297.218 kb on + strand, within MPMX20_04102at 4297.277 kb on + strand, within MPMX20_04102at 4297.312 kb on + strandat 4297.323 kb on + strandat 4297.356 kb on + strandat 4297.361 kb on + strandat 4297.369 kb on - strandat 4297.385 kb on - strandat 4297.467 kb on - strandat 4297.474 kb on + strandat 4297.480 kb on + strandat 4297.488 kb on - strandat 4297.490 kb on + strandat 4297.498 kb on - strandat 4297.580 kb on + strand, within MPMX20_04103at 4297.580 kb on + strand, within MPMX20_04103at 4297.713 kb on + strand, within MPMX20_04103at 4297.713 kb on + strand, within MPMX20_04103at 4297.749 kb on + strand, within MPMX20_04103at 4297.829 kb on + strand, within MPMX20_04103at 4297.841 kb on + strand, within MPMX20_04103at 4297.855 kb on + strand, within MPMX20_04103at 4297.908 kb on + strand, within MPMX20_04103at 4297.916 kb on - strand, within MPMX20_04103at 4297.916 kb on - strand, within MPMX20_04103at 4297.952 kb on + strand, within MPMX20_04103at 4298.008 kb on - strand, within MPMX20_04103at 4298.014 kb on - strand, within MPMX20_04103at 4298.019 kb on + strand, within MPMX20_04103at 4298.037 kb on - strand, within MPMX20_04103at 4298.039 kb on + strand, within MPMX20_04103at 4298.049 kb on - strand, within MPMX20_04103at 4298.198 kb on + strand, within MPMX20_04103at 4298.198 kb on + strand, within MPMX20_04103at 4298.217 kb on + strand, within MPMX20_04103at 4298.217 kb on + strand, within MPMX20_04103at 4298.245 kb on - strand, within MPMX20_04103at 4298.262 kb on + strand, within MPMX20_04103at 4298.320 kb on - strandat 4298.348 kb on + strandat 4298.380 kb on + strandat 4298.380 kb on + strandat 4298.380 kb on + strandat 4298.386 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; outer cut; 0.3% agar
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4,295,426 + -1.5
4,295,426 + -1.2
4,295,434 - -2.8
4,295,434 - -0.6
4,295,434 - +0.5
4,295,457 + MPMX20_04101 0.11 +0.6
4,295,527 + MPMX20_04101 0.19 -1.3
4,295,615 + MPMX20_04101 0.30 -0.2
4,295,615 + MPMX20_04101 0.30 -0.2
4,295,623 - MPMX20_04101 0.31 +0.3
4,295,626 + MPMX20_04101 0.31 +0.5
4,295,626 + MPMX20_04101 0.31 -2.3
4,295,626 + MPMX20_04101 0.31 -1.8
4,295,634 - MPMX20_04101 0.32 -0.8
4,295,654 + MPMX20_04101 0.35 -0.9
4,295,655 + MPMX20_04101 0.35 +1.0
4,295,750 + MPMX20_04101 0.47 -0.7
4,295,758 - MPMX20_04101 0.48 -1.5
4,295,799 - MPMX20_04101 0.53 -0.0
4,295,892 + MPMX20_04101 0.64 -1.9
4,295,919 + MPMX20_04101 0.68 -0.4
4,295,936 + MPMX20_04101 0.70 -0.9
4,295,936 + MPMX20_04101 0.70 -0.7
4,295,938 + MPMX20_04101 0.70 -3.1
4,295,940 + MPMX20_04101 0.70 -0.5
4,295,944 - MPMX20_04101 0.71 -2.2
4,295,946 - MPMX20_04101 0.71 -0.8
4,296,070 + MPMX20_04101 0.86 +1.0
4,296,188 + -1.0
4,296,222 + +0.7
4,296,232 + -0.9
4,296,232 + -1.5
4,296,240 - -0.2
4,296,337 + -0.3
4,296,337 + -2.0
4,296,337 + -0.5
4,296,338 + -0.8
4,296,345 - -0.0
4,296,345 - +0.0
4,296,347 + -2.2
4,296,349 + -1.1
4,296,349 + -0.2
4,296,352 - -0.3
4,296,352 - -1.0
4,296,371 - -0.0
4,296,458 + -0.2
4,296,458 + -0.0
4,296,461 + -0.2
4,296,461 + -0.6
4,296,469 - -0.5
4,296,469 - -1.6
4,296,469 - -2.7
4,296,469 - -0.0
4,296,490 + -1.0
4,296,490 + +1.5
4,296,498 - -0.0
4,296,503 - +0.2
4,296,519 - MPMX20_04102 0.11 -1.7
4,296,540 + MPMX20_04102 0.13 +1.5
4,296,543 - MPMX20_04102 0.13 -0.6
4,296,614 - MPMX20_04102 0.20 -0.5
4,296,636 + MPMX20_04102 0.23 +0.5
4,296,656 - MPMX20_04102 0.25 +1.5
4,296,664 + MPMX20_04102 0.26 -0.8
4,296,671 - MPMX20_04102 0.26 -1.0
4,296,672 - MPMX20_04102 0.26 -0.9
4,296,686 - MPMX20_04102 0.28 +0.3
4,296,750 - MPMX20_04102 0.34 +0.5
4,296,757 - MPMX20_04102 0.35 +1.5
4,296,793 - MPMX20_04102 0.39 -0.5
4,296,881 - MPMX20_04102 0.48 -1.4
4,296,881 - MPMX20_04102 0.48 -1.5
4,297,008 - MPMX20_04102 0.61 -0.8
4,297,050 - MPMX20_04102 0.65 -0.6
4,297,088 + MPMX20_04102 0.69 -1.8
4,297,144 - MPMX20_04102 0.75 -2.1
4,297,184 - MPMX20_04102 0.79 +0.1
4,297,185 - MPMX20_04102 0.79 +1.4
4,297,196 + MPMX20_04102 0.80 -0.8
4,297,204 - MPMX20_04102 0.81 -0.0
4,297,218 + MPMX20_04102 0.82 -1.0
4,297,277 + MPMX20_04102 0.88 -2.7
4,297,312 + -0.9
4,297,323 + +0.2
4,297,356 + +1.0
4,297,361 + -0.1
4,297,369 - -1.8
4,297,385 - -1.5
4,297,467 - -2.5
4,297,474 + -0.0
4,297,480 + -0.5
4,297,488 - -1.0
4,297,490 + -1.5
4,297,498 - -1.3
4,297,580 + MPMX20_04103 0.18 -0.8
4,297,580 + MPMX20_04103 0.18 -1.5
4,297,713 + MPMX20_04103 0.31 +1.2
4,297,713 + MPMX20_04103 0.31 -0.7
4,297,749 + MPMX20_04103 0.35 +0.5
4,297,829 + MPMX20_04103 0.43 -0.8
4,297,841 + MPMX20_04103 0.44 +2.5
4,297,855 + MPMX20_04103 0.46 -0.0
4,297,908 + MPMX20_04103 0.51 -1.8
4,297,916 - MPMX20_04103 0.52 -1.8
4,297,916 - MPMX20_04103 0.52 -0.8
4,297,952 + MPMX20_04103 0.55 +0.1
4,298,008 - MPMX20_04103 0.61 +0.5
4,298,014 - MPMX20_04103 0.62 -1.2
4,298,019 + MPMX20_04103 0.62 +0.1
4,298,037 - MPMX20_04103 0.64 -1.3
4,298,039 + MPMX20_04103 0.64 -0.0
4,298,049 - MPMX20_04103 0.65 -0.0
4,298,198 + MPMX20_04103 0.80 -0.8
4,298,198 + MPMX20_04103 0.80 -2.0
4,298,217 + MPMX20_04103 0.82 +0.1
4,298,217 + MPMX20_04103 0.82 -0.8
4,298,245 - MPMX20_04103 0.85 -2.7
4,298,262 + MPMX20_04103 0.87 +0.8
4,298,320 - -1.0
4,298,348 + +0.4
4,298,380 + +0.2
4,298,380 + -0.8
4,298,380 + -0.3
4,298,386 + -0.0

Or see this region's nucleotide sequence