Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02417

Experiment: Motility test in 1X LB; 1 day; outer cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02416 and MPMX20_02417 are separated by 4 nucleotidesMPMX20_02417 and MPMX20_02418 overlap by 4 nucleotides MPMX20_02416: MPMX20_02416 - hypothetical protein, at 2,549,633 to 2,550,985 _02416 MPMX20_02417: MPMX20_02417 - hypothetical protein, at 2,550,990 to 2,553,971 _02417 MPMX20_02418: MPMX20_02418 - hypothetical protein, at 2,553,968 to 2,556,142 _02418 Position (kb) 2550 2551 2552 2553 2554Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2550.038 kb on + strand, within MPMX20_02416at 2550.053 kb on - strand, within MPMX20_02416at 2550.107 kb on - strand, within MPMX20_02416at 2550.112 kb on + strand, within MPMX20_02416at 2550.117 kb on + strand, within MPMX20_02416at 2550.125 kb on - strand, within MPMX20_02416at 2550.148 kb on + strand, within MPMX20_02416at 2550.156 kb on - strand, within MPMX20_02416at 2550.156 kb on - strand, within MPMX20_02416at 2550.159 kb on + strand, within MPMX20_02416at 2550.183 kb on + strand, within MPMX20_02416at 2550.183 kb on + strand, within MPMX20_02416at 2550.183 kb on + strand, within MPMX20_02416at 2550.184 kb on - strand, within MPMX20_02416at 2550.191 kb on - strand, within MPMX20_02416at 2550.191 kb on - strand, within MPMX20_02416at 2550.250 kb on + strand, within MPMX20_02416at 2550.250 kb on + strand, within MPMX20_02416at 2550.250 kb on + strand, within MPMX20_02416at 2550.256 kb on + strand, within MPMX20_02416at 2550.258 kb on - strand, within MPMX20_02416at 2550.308 kb on - strand, within MPMX20_02416at 2550.333 kb on + strand, within MPMX20_02416at 2550.397 kb on - strand, within MPMX20_02416at 2550.397 kb on - strand, within MPMX20_02416at 2550.399 kb on + strand, within MPMX20_02416at 2550.399 kb on + strand, within MPMX20_02416at 2550.407 kb on - strand, within MPMX20_02416at 2550.449 kb on - strand, within MPMX20_02416at 2550.506 kb on + strand, within MPMX20_02416at 2550.516 kb on + strand, within MPMX20_02416at 2550.524 kb on - strand, within MPMX20_02416at 2550.554 kb on + strand, within MPMX20_02416at 2550.631 kb on + strand, within MPMX20_02416at 2550.734 kb on - strand, within MPMX20_02416at 2550.746 kb on + strand, within MPMX20_02416at 2550.873 kb on + strandat 2550.906 kb on + strandat 2550.985 kb on + strandat 2551.009 kb on + strandat 2551.009 kb on + strandat 2551.017 kb on - strandat 2551.019 kb on - strandat 2551.074 kb on + strandat 2551.082 kb on - strandat 2551.193 kb on + strandat 2551.245 kb on + strandat 2551.525 kb on - strand, within MPMX20_02417at 2551.593 kb on - strand, within MPMX20_02417at 2551.633 kb on + strand, within MPMX20_02417at 2551.641 kb on - strand, within MPMX20_02417at 2551.665 kb on - strand, within MPMX20_02417at 2551.692 kb on + strand, within MPMX20_02417at 2551.693 kb on + strand, within MPMX20_02417at 2551.701 kb on - strand, within MPMX20_02417at 2551.701 kb on - strand, within MPMX20_02417at 2551.748 kb on + strand, within MPMX20_02417at 2551.749 kb on + strand, within MPMX20_02417at 2551.805 kb on - strand, within MPMX20_02417at 2551.818 kb on + strand, within MPMX20_02417at 2551.826 kb on - strand, within MPMX20_02417at 2551.826 kb on - strand, within MPMX20_02417at 2551.842 kb on + strand, within MPMX20_02417at 2551.918 kb on - strand, within MPMX20_02417at 2551.974 kb on + strand, within MPMX20_02417at 2552.054 kb on + strand, within MPMX20_02417at 2552.078 kb on - strand, within MPMX20_02417at 2552.099 kb on + strand, within MPMX20_02417at 2552.242 kb on + strand, within MPMX20_02417at 2552.242 kb on + strand, within MPMX20_02417at 2552.250 kb on - strand, within MPMX20_02417at 2552.267 kb on - strand, within MPMX20_02417at 2552.272 kb on + strand, within MPMX20_02417at 2552.282 kb on + strand, within MPMX20_02417at 2552.307 kb on + strand, within MPMX20_02417at 2552.334 kb on - strand, within MPMX20_02417at 2552.360 kb on + strand, within MPMX20_02417at 2552.363 kb on - strand, within MPMX20_02417at 2552.368 kb on - strand, within MPMX20_02417at 2552.368 kb on - strand, within MPMX20_02417at 2552.368 kb on - strand, within MPMX20_02417at 2552.415 kb on - strand, within MPMX20_02417at 2552.481 kb on - strand, within MPMX20_02417at 2552.523 kb on + strand, within MPMX20_02417at 2552.529 kb on + strand, within MPMX20_02417at 2552.542 kb on - strand, within MPMX20_02417at 2552.602 kb on - strand, within MPMX20_02417at 2552.606 kb on - strand, within MPMX20_02417at 2552.753 kb on + strand, within MPMX20_02417at 2552.788 kb on + strand, within MPMX20_02417at 2552.788 kb on + strand, within MPMX20_02417at 2552.788 kb on + strand, within MPMX20_02417at 2552.796 kb on - strand, within MPMX20_02417at 2552.796 kb on - strand, within MPMX20_02417at 2552.834 kb on - strand, within MPMX20_02417at 2552.943 kb on + strand, within MPMX20_02417at 2552.951 kb on - strand, within MPMX20_02417at 2553.125 kb on - strand, within MPMX20_02417at 2553.136 kb on + strand, within MPMX20_02417at 2553.136 kb on + strand, within MPMX20_02417at 2553.144 kb on - strand, within MPMX20_02417at 2553.213 kb on - strand, within MPMX20_02417at 2553.234 kb on - strand, within MPMX20_02417at 2553.308 kb on + strand, within MPMX20_02417at 2553.313 kb on + strand, within MPMX20_02417at 2553.441 kb on + strand, within MPMX20_02417at 2553.458 kb on + strand, within MPMX20_02417at 2553.532 kb on - strand, within MPMX20_02417at 2553.549 kb on - strand, within MPMX20_02417at 2553.562 kb on - strand, within MPMX20_02417at 2553.647 kb on - strand, within MPMX20_02417at 2553.738 kb on - strandat 2553.812 kb on + strandat 2553.820 kb on - strandat 2553.882 kb on + strandat 2553.989 kb on + strandat 2553.989 kb on + strandat 2553.997 kb on - strandat 2554.040 kb on - strandat 2554.040 kb on - strandat 2554.040 kb on - strandat 2554.040 kb on - strandat 2554.072 kb on + strandat 2554.080 kb on - strandat 2554.080 kb on - strandat 2554.080 kb on - strandat 2554.089 kb on + strandat 2554.131 kb on + strandat 2554.131 kb on + strandat 2554.131 kb on + strandat 2554.139 kb on - strandat 2554.139 kb on - strandat 2554.139 kb on - strandat 2554.139 kb on - strandat 2554.174 kb on + strandat 2554.226 kb on - strand, within MPMX20_02418at 2554.226 kb on - strand, within MPMX20_02418at 2554.226 kb on - strand, within MPMX20_02418at 2554.263 kb on + strand, within MPMX20_02418at 2554.276 kb on - strand, within MPMX20_02418at 2554.288 kb on + strand, within MPMX20_02418at 2554.291 kb on - strand, within MPMX20_02418at 2554.482 kb on - strand, within MPMX20_02418at 2554.482 kb on - strand, within MPMX20_02418at 2554.530 kb on + strand, within MPMX20_02418at 2554.530 kb on + strand, within MPMX20_02418at 2554.530 kb on + strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.538 kb on - strand, within MPMX20_02418at 2554.596 kb on - strand, within MPMX20_02418at 2554.599 kb on - strand, within MPMX20_02418at 2554.636 kb on + strand, within MPMX20_02418at 2554.644 kb on - strand, within MPMX20_02418at 2554.644 kb on - strand, within MPMX20_02418at 2554.644 kb on - strand, within MPMX20_02418at 2554.644 kb on - strand, within MPMX20_02418at 2554.654 kb on + strand, within MPMX20_02418at 2554.671 kb on + strand, within MPMX20_02418at 2554.672 kb on + strand, within MPMX20_02418at 2554.683 kb on + strand, within MPMX20_02418at 2554.683 kb on + strand, within MPMX20_02418at 2554.763 kb on + strand, within MPMX20_02418at 2554.771 kb on - strand, within MPMX20_02418at 2554.788 kb on + strand, within MPMX20_02418at 2554.794 kb on + strand, within MPMX20_02418at 2554.796 kb on - strand, within MPMX20_02418at 2554.796 kb on - strand, within MPMX20_02418at 2554.813 kb on - strand, within MPMX20_02418at 2554.813 kb on - strand, within MPMX20_02418at 2554.866 kb on + strand, within MPMX20_02418at 2554.866 kb on - strand, within MPMX20_02418at 2554.898 kb on - strand, within MPMX20_02418

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; outer cut; 0.3% agar
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2,550,038 + MPMX20_02416 0.30 -2.5
2,550,053 - MPMX20_02416 0.31 +0.1
2,550,107 - MPMX20_02416 0.35 -1.4
2,550,112 + MPMX20_02416 0.35 -2.2
2,550,117 + MPMX20_02416 0.36 -3.8
2,550,125 - MPMX20_02416 0.36 -2.8
2,550,148 + MPMX20_02416 0.38 -1.8
2,550,156 - MPMX20_02416 0.39 -2.5
2,550,156 - MPMX20_02416 0.39 -2.8
2,550,159 + MPMX20_02416 0.39 -0.6
2,550,183 + MPMX20_02416 0.41 -3.8
2,550,183 + MPMX20_02416 0.41 -2.1
2,550,183 + MPMX20_02416 0.41 -0.5
2,550,184 - MPMX20_02416 0.41 -3.0
2,550,191 - MPMX20_02416 0.41 -2.3
2,550,191 - MPMX20_02416 0.41 -2.0
2,550,250 + MPMX20_02416 0.46 -1.2
2,550,250 + MPMX20_02416 0.46 +1.5
2,550,250 + MPMX20_02416 0.46 -0.5
2,550,256 + MPMX20_02416 0.46 -2.0
2,550,258 - MPMX20_02416 0.46 -0.2
2,550,308 - MPMX20_02416 0.50 -0.5
2,550,333 + MPMX20_02416 0.52 -2.7
2,550,397 - MPMX20_02416 0.56 -1.5
2,550,397 - MPMX20_02416 0.56 -0.5
2,550,399 + MPMX20_02416 0.57 -1.6
2,550,399 + MPMX20_02416 0.57 -0.9
2,550,407 - MPMX20_02416 0.57 -0.7
2,550,449 - MPMX20_02416 0.60 -1.5
2,550,506 + MPMX20_02416 0.65 -1.5
2,550,516 + MPMX20_02416 0.65 -1.8
2,550,524 - MPMX20_02416 0.66 -1.7
2,550,554 + MPMX20_02416 0.68 +0.3
2,550,631 + MPMX20_02416 0.74 -0.5
2,550,734 - MPMX20_02416 0.81 -1.6
2,550,746 + MPMX20_02416 0.82 +0.0
2,550,873 + -1.8
2,550,906 + -0.0
2,550,985 + -1.6
2,551,009 + -0.1
2,551,009 + -1.9
2,551,017 - -1.8
2,551,019 - -0.8
2,551,074 + -2.0
2,551,082 - -1.0
2,551,193 + -2.3
2,551,245 + -1.0
2,551,525 - MPMX20_02417 0.18 -3.9
2,551,593 - MPMX20_02417 0.20 -1.6
2,551,633 + MPMX20_02417 0.22 -1.7
2,551,641 - MPMX20_02417 0.22 +1.1
2,551,665 - MPMX20_02417 0.23 -2.1
2,551,692 + MPMX20_02417 0.24 -1.6
2,551,693 + MPMX20_02417 0.24 -2.7
2,551,701 - MPMX20_02417 0.24 -2.2
2,551,701 - MPMX20_02417 0.24 -1.3
2,551,748 + MPMX20_02417 0.25 -1.6
2,551,749 + MPMX20_02417 0.25 -1.5
2,551,805 - MPMX20_02417 0.27 -0.5
2,551,818 + MPMX20_02417 0.28 -2.9
2,551,826 - MPMX20_02417 0.28 -0.1
2,551,826 - MPMX20_02417 0.28 -1.0
2,551,842 + MPMX20_02417 0.29 -1.8
2,551,918 - MPMX20_02417 0.31 -3.3
2,551,974 + MPMX20_02417 0.33 -3.6
2,552,054 + MPMX20_02417 0.36 -1.2
2,552,078 - MPMX20_02417 0.36 -3.1
2,552,099 + MPMX20_02417 0.37 -2.0
2,552,242 + MPMX20_02417 0.42 -2.1
2,552,242 + MPMX20_02417 0.42 -1.3
2,552,250 - MPMX20_02417 0.42 -1.5
2,552,267 - MPMX20_02417 0.43 -2.8
2,552,272 + MPMX20_02417 0.43 -1.4
2,552,282 + MPMX20_02417 0.43 +0.5
2,552,307 + MPMX20_02417 0.44 -1.5
2,552,334 - MPMX20_02417 0.45 -3.5
2,552,360 + MPMX20_02417 0.46 -2.8
2,552,363 - MPMX20_02417 0.46 -1.1
2,552,368 - MPMX20_02417 0.46 -3.0
2,552,368 - MPMX20_02417 0.46 -1.2
2,552,368 - MPMX20_02417 0.46 -3.1
2,552,415 - MPMX20_02417 0.48 -1.7
2,552,481 - MPMX20_02417 0.50 -1.0
2,552,523 + MPMX20_02417 0.51 -1.6
2,552,529 + MPMX20_02417 0.52 -0.5
2,552,542 - MPMX20_02417 0.52 -2.2
2,552,602 - MPMX20_02417 0.54 -2.4
2,552,606 - MPMX20_02417 0.54 -0.8
2,552,753 + MPMX20_02417 0.59 -1.3
2,552,788 + MPMX20_02417 0.60 -2.2
2,552,788 + MPMX20_02417 0.60 -1.6
2,552,788 + MPMX20_02417 0.60 -1.6
2,552,796 - MPMX20_02417 0.61 -2.0
2,552,796 - MPMX20_02417 0.61 -1.9
2,552,834 - MPMX20_02417 0.62 -2.0
2,552,943 + MPMX20_02417 0.65 -0.9
2,552,951 - MPMX20_02417 0.66 +0.5
2,553,125 - MPMX20_02417 0.72 -2.2
2,553,136 + MPMX20_02417 0.72 -2.2
2,553,136 + MPMX20_02417 0.72 -2.1
2,553,144 - MPMX20_02417 0.72 -3.6
2,553,213 - MPMX20_02417 0.75 +1.0
2,553,234 - MPMX20_02417 0.75 -1.0
2,553,308 + MPMX20_02417 0.78 -2.4
2,553,313 + MPMX20_02417 0.78 -1.9
2,553,441 + MPMX20_02417 0.82 -1.0
2,553,458 + MPMX20_02417 0.83 -2.8
2,553,532 - MPMX20_02417 0.85 -0.0
2,553,549 - MPMX20_02417 0.86 -1.5
2,553,562 - MPMX20_02417 0.86 -0.8
2,553,647 - MPMX20_02417 0.89 -0.3
2,553,738 - -1.5
2,553,812 + -2.7
2,553,820 - -2.4
2,553,882 + -1.5
2,553,989 + -0.5
2,553,989 + -3.6
2,553,997 - -1.4
2,554,040 - -2.6
2,554,040 - -0.8
2,554,040 - +0.3
2,554,040 - -3.6
2,554,072 + -1.5
2,554,080 - -3.0
2,554,080 - -1.0
2,554,080 - -3.5
2,554,089 + -2.5
2,554,131 + -2.7
2,554,131 + -1.8
2,554,131 + -1.3
2,554,139 - -2.9
2,554,139 - -2.1
2,554,139 - -3.1
2,554,139 - -2.0
2,554,174 + -2.2
2,554,226 - MPMX20_02418 0.12 -2.0
2,554,226 - MPMX20_02418 0.12 -2.5
2,554,226 - MPMX20_02418 0.12 -1.0
2,554,263 + MPMX20_02418 0.14 -1.4
2,554,276 - MPMX20_02418 0.14 -3.2
2,554,288 + MPMX20_02418 0.15 -0.7
2,554,291 - MPMX20_02418 0.15 -1.4
2,554,482 - MPMX20_02418 0.24 +0.5
2,554,482 - MPMX20_02418 0.24 -2.6
2,554,530 + MPMX20_02418 0.26 -1.4
2,554,530 + MPMX20_02418 0.26 -1.9
2,554,530 + MPMX20_02418 0.26 -1.4
2,554,538 - MPMX20_02418 0.26 -1.8
2,554,538 - MPMX20_02418 0.26 -2.5
2,554,538 - MPMX20_02418 0.26 -1.0
2,554,538 - MPMX20_02418 0.26 -2.0
2,554,538 - MPMX20_02418 0.26 -1.7
2,554,538 - MPMX20_02418 0.26 -0.0
2,554,596 - MPMX20_02418 0.29 -2.7
2,554,599 - MPMX20_02418 0.29 -3.4
2,554,636 + MPMX20_02418 0.31 -2.3
2,554,644 - MPMX20_02418 0.31 -1.0
2,554,644 - MPMX20_02418 0.31 -3.1
2,554,644 - MPMX20_02418 0.31 -1.9
2,554,644 - MPMX20_02418 0.31 -2.2
2,554,654 + MPMX20_02418 0.32 -1.4
2,554,671 + MPMX20_02418 0.32 -1.2
2,554,672 + MPMX20_02418 0.32 +0.5
2,554,683 + MPMX20_02418 0.33 -3.5
2,554,683 + MPMX20_02418 0.33 -1.9
2,554,763 + MPMX20_02418 0.37 -1.6
2,554,771 - MPMX20_02418 0.37 -2.2
2,554,788 + MPMX20_02418 0.38 -0.8
2,554,794 + MPMX20_02418 0.38 -1.9
2,554,796 - MPMX20_02418 0.38 -1.1
2,554,796 - MPMX20_02418 0.38 -2.1
2,554,813 - MPMX20_02418 0.39 -2.5
2,554,813 - MPMX20_02418 0.39 -1.6
2,554,866 + MPMX20_02418 0.41 -2.3
2,554,866 - MPMX20_02418 0.41 -1.0
2,554,898 - MPMX20_02418 0.43 -2.9

Or see this region's nucleotide sequence