Experiment: Motility test in 1X LB; 1 day; outer cut; 0.3% agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02416 and MPMX20_02417 are separated by 4 nucleotides MPMX20_02417 and MPMX20_02418 overlap by 4 nucleotides
MPMX20_02416: MPMX20_02416 - hypothetical protein, at 2,549,633 to 2,550,985
_02416
MPMX20_02417: MPMX20_02417 - hypothetical protein, at 2,550,990 to 2,553,971
_02417
MPMX20_02418: MPMX20_02418 - hypothetical protein, at 2,553,968 to 2,556,142
_02418
Position (kb)
2550
2551
2552
2553
2554 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2550.038 kb on + strand, within MPMX20_02416 at 2550.053 kb on - strand, within MPMX20_02416 at 2550.107 kb on - strand, within MPMX20_02416 at 2550.112 kb on + strand, within MPMX20_02416 at 2550.117 kb on + strand, within MPMX20_02416 at 2550.125 kb on - strand, within MPMX20_02416 at 2550.148 kb on + strand, within MPMX20_02416 at 2550.156 kb on - strand, within MPMX20_02416 at 2550.156 kb on - strand, within MPMX20_02416 at 2550.159 kb on + strand, within MPMX20_02416 at 2550.183 kb on + strand, within MPMX20_02416 at 2550.183 kb on + strand, within MPMX20_02416 at 2550.183 kb on + strand, within MPMX20_02416 at 2550.184 kb on - strand, within MPMX20_02416 at 2550.191 kb on - strand, within MPMX20_02416 at 2550.191 kb on - strand, within MPMX20_02416 at 2550.250 kb on + strand, within MPMX20_02416 at 2550.250 kb on + strand, within MPMX20_02416 at 2550.250 kb on + strand, within MPMX20_02416 at 2550.256 kb on + strand, within MPMX20_02416 at 2550.258 kb on - strand, within MPMX20_02416 at 2550.308 kb on - strand, within MPMX20_02416 at 2550.333 kb on + strand, within MPMX20_02416 at 2550.397 kb on - strand, within MPMX20_02416 at 2550.397 kb on - strand, within MPMX20_02416 at 2550.399 kb on + strand, within MPMX20_02416 at 2550.399 kb on + strand, within MPMX20_02416 at 2550.407 kb on - strand, within MPMX20_02416 at 2550.449 kb on - strand, within MPMX20_02416 at 2550.506 kb on + strand, within MPMX20_02416 at 2550.516 kb on + strand, within MPMX20_02416 at 2550.524 kb on - strand, within MPMX20_02416 at 2550.554 kb on + strand, within MPMX20_02416 at 2550.631 kb on + strand, within MPMX20_02416 at 2550.734 kb on - strand, within MPMX20_02416 at 2550.746 kb on + strand, within MPMX20_02416 at 2550.873 kb on + strand at 2550.906 kb on + strand at 2550.985 kb on + strand at 2551.009 kb on + strand at 2551.009 kb on + strand at 2551.017 kb on - strand at 2551.019 kb on - strand at 2551.074 kb on + strand at 2551.082 kb on - strand at 2551.193 kb on + strand at 2551.245 kb on + strand at 2551.525 kb on - strand, within MPMX20_02417 at 2551.593 kb on - strand, within MPMX20_02417 at 2551.633 kb on + strand, within MPMX20_02417 at 2551.641 kb on - strand, within MPMX20_02417 at 2551.665 kb on - strand, within MPMX20_02417 at 2551.692 kb on + strand, within MPMX20_02417 at 2551.693 kb on + strand, within MPMX20_02417 at 2551.701 kb on - strand, within MPMX20_02417 at 2551.701 kb on - strand, within MPMX20_02417 at 2551.748 kb on + strand, within MPMX20_02417 at 2551.749 kb on + strand, within MPMX20_02417 at 2551.805 kb on - strand, within MPMX20_02417 at 2551.818 kb on + strand, within MPMX20_02417 at 2551.826 kb on - strand, within MPMX20_02417 at 2551.826 kb on - strand, within MPMX20_02417 at 2551.842 kb on + strand, within MPMX20_02417 at 2551.918 kb on - strand, within MPMX20_02417 at 2551.974 kb on + strand, within MPMX20_02417 at 2552.054 kb on + strand, within MPMX20_02417 at 2552.078 kb on - strand, within MPMX20_02417 at 2552.099 kb on + strand, within MPMX20_02417 at 2552.242 kb on + strand, within MPMX20_02417 at 2552.242 kb on + strand, within MPMX20_02417 at 2552.250 kb on - strand, within MPMX20_02417 at 2552.267 kb on - strand, within MPMX20_02417 at 2552.272 kb on + strand, within MPMX20_02417 at 2552.282 kb on + strand, within MPMX20_02417 at 2552.307 kb on + strand, within MPMX20_02417 at 2552.334 kb on - strand, within MPMX20_02417 at 2552.360 kb on + strand, within MPMX20_02417 at 2552.363 kb on - strand, within MPMX20_02417 at 2552.368 kb on - strand, within MPMX20_02417 at 2552.368 kb on - strand, within MPMX20_02417 at 2552.368 kb on - strand, within MPMX20_02417 at 2552.415 kb on - strand, within MPMX20_02417 at 2552.481 kb on - strand, within MPMX20_02417 at 2552.523 kb on + strand, within MPMX20_02417 at 2552.529 kb on + strand, within MPMX20_02417 at 2552.542 kb on - strand, within MPMX20_02417 at 2552.602 kb on - strand, within MPMX20_02417 at 2552.606 kb on - strand, within MPMX20_02417 at 2552.753 kb on + strand, within MPMX20_02417 at 2552.788 kb on + strand, within MPMX20_02417 at 2552.788 kb on + strand, within MPMX20_02417 at 2552.788 kb on + strand, within MPMX20_02417 at 2552.796 kb on - strand, within MPMX20_02417 at 2552.796 kb on - strand, within MPMX20_02417 at 2552.834 kb on - strand, within MPMX20_02417 at 2552.943 kb on + strand, within MPMX20_02417 at 2552.951 kb on - strand, within MPMX20_02417 at 2553.125 kb on - strand, within MPMX20_02417 at 2553.136 kb on + strand, within MPMX20_02417 at 2553.136 kb on + strand, within MPMX20_02417 at 2553.144 kb on - strand, within MPMX20_02417 at 2553.213 kb on - strand, within MPMX20_02417 at 2553.234 kb on - strand, within MPMX20_02417 at 2553.308 kb on + strand, within MPMX20_02417 at 2553.313 kb on + strand, within MPMX20_02417 at 2553.441 kb on + strand, within MPMX20_02417 at 2553.458 kb on + strand, within MPMX20_02417 at 2553.532 kb on - strand, within MPMX20_02417 at 2553.549 kb on - strand, within MPMX20_02417 at 2553.562 kb on - strand, within MPMX20_02417 at 2553.647 kb on - strand, within MPMX20_02417 at 2553.738 kb on - strand at 2553.812 kb on + strand at 2553.820 kb on - strand at 2553.882 kb on + strand at 2553.989 kb on + strand at 2553.989 kb on + strand at 2553.997 kb on - strand at 2554.040 kb on - strand at 2554.040 kb on - strand at 2554.040 kb on - strand at 2554.040 kb on - strand at 2554.072 kb on + strand at 2554.080 kb on - strand at 2554.080 kb on - strand at 2554.080 kb on - strand at 2554.089 kb on + strand at 2554.131 kb on + strand at 2554.131 kb on + strand at 2554.131 kb on + strand at 2554.139 kb on - strand at 2554.139 kb on - strand at 2554.139 kb on - strand at 2554.139 kb on - strand at 2554.174 kb on + strand at 2554.226 kb on - strand, within MPMX20_02418 at 2554.226 kb on - strand, within MPMX20_02418 at 2554.226 kb on - strand, within MPMX20_02418 at 2554.263 kb on + strand, within MPMX20_02418 at 2554.276 kb on - strand, within MPMX20_02418 at 2554.288 kb on + strand, within MPMX20_02418 at 2554.291 kb on - strand, within MPMX20_02418 at 2554.482 kb on - strand, within MPMX20_02418 at 2554.482 kb on - strand, within MPMX20_02418 at 2554.530 kb on + strand, within MPMX20_02418 at 2554.530 kb on + strand, within MPMX20_02418 at 2554.530 kb on + strand, within MPMX20_02418 at 2554.538 kb on - strand, within MPMX20_02418 at 2554.538 kb on - strand, within MPMX20_02418 at 2554.538 kb on - strand, within MPMX20_02418 at 2554.538 kb on - strand, within MPMX20_02418 at 2554.538 kb on - strand, within MPMX20_02418 at 2554.538 kb on - strand, within MPMX20_02418 at 2554.596 kb on - strand, within MPMX20_02418 at 2554.599 kb on - strand, within MPMX20_02418 at 2554.636 kb on + strand, within MPMX20_02418 at 2554.644 kb on - strand, within MPMX20_02418 at 2554.644 kb on - strand, within MPMX20_02418 at 2554.644 kb on - strand, within MPMX20_02418 at 2554.644 kb on - strand, within MPMX20_02418 at 2554.654 kb on + strand, within MPMX20_02418 at 2554.671 kb on + strand, within MPMX20_02418 at 2554.672 kb on + strand, within MPMX20_02418 at 2554.683 kb on + strand, within MPMX20_02418 at 2554.683 kb on + strand, within MPMX20_02418 at 2554.763 kb on + strand, within MPMX20_02418 at 2554.771 kb on - strand, within MPMX20_02418 at 2554.788 kb on + strand, within MPMX20_02418 at 2554.794 kb on + strand, within MPMX20_02418 at 2554.796 kb on - strand, within MPMX20_02418 at 2554.796 kb on - strand, within MPMX20_02418 at 2554.813 kb on - strand, within MPMX20_02418 at 2554.813 kb on - strand, within MPMX20_02418 at 2554.866 kb on + strand, within MPMX20_02418 at 2554.866 kb on - strand, within MPMX20_02418 at 2554.898 kb on - strand, within MPMX20_02418
Per-strain Table
Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; outer cut; 0.3% agar remove 2,550,038 + MPMX20_02416 0.30 -2.5 2,550,053 - MPMX20_02416 0.31 +0.1 2,550,107 - MPMX20_02416 0.35 -1.4 2,550,112 + MPMX20_02416 0.35 -2.2 2,550,117 + MPMX20_02416 0.36 -3.8 2,550,125 - MPMX20_02416 0.36 -2.8 2,550,148 + MPMX20_02416 0.38 -1.8 2,550,156 - MPMX20_02416 0.39 -2.5 2,550,156 - MPMX20_02416 0.39 -2.8 2,550,159 + MPMX20_02416 0.39 -0.6 2,550,183 + MPMX20_02416 0.41 -3.8 2,550,183 + MPMX20_02416 0.41 -2.1 2,550,183 + MPMX20_02416 0.41 -0.5 2,550,184 - MPMX20_02416 0.41 -3.0 2,550,191 - MPMX20_02416 0.41 -2.3 2,550,191 - MPMX20_02416 0.41 -2.0 2,550,250 + MPMX20_02416 0.46 -1.2 2,550,250 + MPMX20_02416 0.46 +1.5 2,550,250 + MPMX20_02416 0.46 -0.5 2,550,256 + MPMX20_02416 0.46 -2.0 2,550,258 - MPMX20_02416 0.46 -0.2 2,550,308 - MPMX20_02416 0.50 -0.5 2,550,333 + MPMX20_02416 0.52 -2.7 2,550,397 - MPMX20_02416 0.56 -1.5 2,550,397 - MPMX20_02416 0.56 -0.5 2,550,399 + MPMX20_02416 0.57 -1.6 2,550,399 + MPMX20_02416 0.57 -0.9 2,550,407 - MPMX20_02416 0.57 -0.7 2,550,449 - MPMX20_02416 0.60 -1.5 2,550,506 + MPMX20_02416 0.65 -1.5 2,550,516 + MPMX20_02416 0.65 -1.8 2,550,524 - MPMX20_02416 0.66 -1.7 2,550,554 + MPMX20_02416 0.68 +0.3 2,550,631 + MPMX20_02416 0.74 -0.5 2,550,734 - MPMX20_02416 0.81 -1.6 2,550,746 + MPMX20_02416 0.82 +0.0 2,550,873 + -1.8 2,550,906 + -0.0 2,550,985 + -1.6 2,551,009 + -0.1 2,551,009 + -1.9 2,551,017 - -1.8 2,551,019 - -0.8 2,551,074 + -2.0 2,551,082 - -1.0 2,551,193 + -2.3 2,551,245 + -1.0 2,551,525 - MPMX20_02417 0.18 -3.9 2,551,593 - MPMX20_02417 0.20 -1.6 2,551,633 + MPMX20_02417 0.22 -1.7 2,551,641 - MPMX20_02417 0.22 +1.1 2,551,665 - MPMX20_02417 0.23 -2.1 2,551,692 + MPMX20_02417 0.24 -1.6 2,551,693 + MPMX20_02417 0.24 -2.7 2,551,701 - MPMX20_02417 0.24 -2.2 2,551,701 - MPMX20_02417 0.24 -1.3 2,551,748 + MPMX20_02417 0.25 -1.6 2,551,749 + MPMX20_02417 0.25 -1.5 2,551,805 - MPMX20_02417 0.27 -0.5 2,551,818 + MPMX20_02417 0.28 -2.9 2,551,826 - MPMX20_02417 0.28 -0.1 2,551,826 - MPMX20_02417 0.28 -1.0 2,551,842 + MPMX20_02417 0.29 -1.8 2,551,918 - MPMX20_02417 0.31 -3.3 2,551,974 + MPMX20_02417 0.33 -3.6 2,552,054 + MPMX20_02417 0.36 -1.2 2,552,078 - MPMX20_02417 0.36 -3.1 2,552,099 + MPMX20_02417 0.37 -2.0 2,552,242 + MPMX20_02417 0.42 -2.1 2,552,242 + MPMX20_02417 0.42 -1.3 2,552,250 - MPMX20_02417 0.42 -1.5 2,552,267 - MPMX20_02417 0.43 -2.8 2,552,272 + MPMX20_02417 0.43 -1.4 2,552,282 + MPMX20_02417 0.43 +0.5 2,552,307 + MPMX20_02417 0.44 -1.5 2,552,334 - MPMX20_02417 0.45 -3.5 2,552,360 + MPMX20_02417 0.46 -2.8 2,552,363 - MPMX20_02417 0.46 -1.1 2,552,368 - MPMX20_02417 0.46 -3.0 2,552,368 - MPMX20_02417 0.46 -1.2 2,552,368 - MPMX20_02417 0.46 -3.1 2,552,415 - MPMX20_02417 0.48 -1.7 2,552,481 - MPMX20_02417 0.50 -1.0 2,552,523 + MPMX20_02417 0.51 -1.6 2,552,529 + MPMX20_02417 0.52 -0.5 2,552,542 - MPMX20_02417 0.52 -2.2 2,552,602 - MPMX20_02417 0.54 -2.4 2,552,606 - MPMX20_02417 0.54 -0.8 2,552,753 + MPMX20_02417 0.59 -1.3 2,552,788 + MPMX20_02417 0.60 -2.2 2,552,788 + MPMX20_02417 0.60 -1.6 2,552,788 + MPMX20_02417 0.60 -1.6 2,552,796 - MPMX20_02417 0.61 -2.0 2,552,796 - MPMX20_02417 0.61 -1.9 2,552,834 - MPMX20_02417 0.62 -2.0 2,552,943 + MPMX20_02417 0.65 -0.9 2,552,951 - MPMX20_02417 0.66 +0.5 2,553,125 - MPMX20_02417 0.72 -2.2 2,553,136 + MPMX20_02417 0.72 -2.2 2,553,136 + MPMX20_02417 0.72 -2.1 2,553,144 - MPMX20_02417 0.72 -3.6 2,553,213 - MPMX20_02417 0.75 +1.0 2,553,234 - MPMX20_02417 0.75 -1.0 2,553,308 + MPMX20_02417 0.78 -2.4 2,553,313 + MPMX20_02417 0.78 -1.9 2,553,441 + MPMX20_02417 0.82 -1.0 2,553,458 + MPMX20_02417 0.83 -2.8 2,553,532 - MPMX20_02417 0.85 -0.0 2,553,549 - MPMX20_02417 0.86 -1.5 2,553,562 - MPMX20_02417 0.86 -0.8 2,553,647 - MPMX20_02417 0.89 -0.3 2,553,738 - -1.5 2,553,812 + -2.7 2,553,820 - -2.4 2,553,882 + -1.5 2,553,989 + -0.5 2,553,989 + -3.6 2,553,997 - -1.4 2,554,040 - -2.6 2,554,040 - -0.8 2,554,040 - +0.3 2,554,040 - -3.6 2,554,072 + -1.5 2,554,080 - -3.0 2,554,080 - -1.0 2,554,080 - -3.5 2,554,089 + -2.5 2,554,131 + -2.7 2,554,131 + -1.8 2,554,131 + -1.3 2,554,139 - -2.9 2,554,139 - -2.1 2,554,139 - -3.1 2,554,139 - -2.0 2,554,174 + -2.2 2,554,226 - MPMX20_02418 0.12 -2.0 2,554,226 - MPMX20_02418 0.12 -2.5 2,554,226 - MPMX20_02418 0.12 -1.0 2,554,263 + MPMX20_02418 0.14 -1.4 2,554,276 - MPMX20_02418 0.14 -3.2 2,554,288 + MPMX20_02418 0.15 -0.7 2,554,291 - MPMX20_02418 0.15 -1.4 2,554,482 - MPMX20_02418 0.24 +0.5 2,554,482 - MPMX20_02418 0.24 -2.6 2,554,530 + MPMX20_02418 0.26 -1.4 2,554,530 + MPMX20_02418 0.26 -1.9 2,554,530 + MPMX20_02418 0.26 -1.4 2,554,538 - MPMX20_02418 0.26 -1.8 2,554,538 - MPMX20_02418 0.26 -2.5 2,554,538 - MPMX20_02418 0.26 -1.0 2,554,538 - MPMX20_02418 0.26 -2.0 2,554,538 - MPMX20_02418 0.26 -1.7 2,554,538 - MPMX20_02418 0.26 -0.0 2,554,596 - MPMX20_02418 0.29 -2.7 2,554,599 - MPMX20_02418 0.29 -3.4 2,554,636 + MPMX20_02418 0.31 -2.3 2,554,644 - MPMX20_02418 0.31 -1.0 2,554,644 - MPMX20_02418 0.31 -3.1 2,554,644 - MPMX20_02418 0.31 -1.9 2,554,644 - MPMX20_02418 0.31 -2.2 2,554,654 + MPMX20_02418 0.32 -1.4 2,554,671 + MPMX20_02418 0.32 -1.2 2,554,672 + MPMX20_02418 0.32 +0.5 2,554,683 + MPMX20_02418 0.33 -3.5 2,554,683 + MPMX20_02418 0.33 -1.9 2,554,763 + MPMX20_02418 0.37 -1.6 2,554,771 - MPMX20_02418 0.37 -2.2 2,554,788 + MPMX20_02418 0.38 -0.8 2,554,794 + MPMX20_02418 0.38 -1.9 2,554,796 - MPMX20_02418 0.38 -1.1 2,554,796 - MPMX20_02418 0.38 -2.1 2,554,813 - MPMX20_02418 0.39 -2.5 2,554,813 - MPMX20_02418 0.39 -1.6 2,554,866 + MPMX20_02418 0.41 -2.3 2,554,866 - MPMX20_02418 0.41 -1.0 2,554,898 - MPMX20_02418 0.43 -2.9
Or see this region's nucleotide sequence