Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02939

Experiment: Motility test in 1X LB; 1 day; inner cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02938 and MPMX20_02939 are separated by 21 nucleotidesMPMX20_02939 and MPMX20_02940 overlap by 4 nucleotides MPMX20_02938: MPMX20_02938 - Flagellum-specific ATP synthase, at 3,068,307 to 3,069,677 _02938 MPMX20_02939: MPMX20_02939 - Flagellar FliJ protein, at 3,069,699 to 3,070,142 _02939 MPMX20_02940: MPMX20_02940 - Flagellar hook-length control protein, at 3,070,139 to 3,071,377 _02940 Position (kb) 3069 3070 3071Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3068.744 kb on + strand, within MPMX20_02938at 3068.744 kb on + strand, within MPMX20_02938at 3068.744 kb on + strand, within MPMX20_02938at 3068.749 kb on + strand, within MPMX20_02938at 3068.752 kb on + strand, within MPMX20_02938at 3068.752 kb on - strand, within MPMX20_02938at 3068.752 kb on - strand, within MPMX20_02938at 3068.754 kb on + strand, within MPMX20_02938at 3068.762 kb on - strand, within MPMX20_02938at 3068.762 kb on - strand, within MPMX20_02938at 3068.842 kb on - strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.877 kb on - strand, within MPMX20_02938at 3068.901 kb on + strand, within MPMX20_02938at 3068.901 kb on + strand, within MPMX20_02938at 3068.925 kb on + strand, within MPMX20_02938at 3068.997 kb on - strand, within MPMX20_02938at 3069.050 kb on + strand, within MPMX20_02938at 3069.122 kb on + strand, within MPMX20_02938at 3069.124 kb on + strand, within MPMX20_02938at 3069.226 kb on - strand, within MPMX20_02938at 3069.425 kb on - strand, within MPMX20_02938at 3069.494 kb on - strand, within MPMX20_02938at 3069.504 kb on - strand, within MPMX20_02938at 3069.511 kb on - strand, within MPMX20_02938at 3069.523 kb on + strand, within MPMX20_02938at 3069.523 kb on + strand, within MPMX20_02938at 3069.531 kb on - strand, within MPMX20_02938at 3069.531 kb on - strand, within MPMX20_02938at 3069.531 kb on - strand, within MPMX20_02938at 3069.636 kb on + strandat 3069.636 kb on + strandat 3069.636 kb on + strandat 3069.644 kb on - strandat 3069.680 kb on - strandat 3069.710 kb on - strandat 3069.783 kb on - strand, within MPMX20_02939at 3069.854 kb on + strand, within MPMX20_02939at 3069.854 kb on + strand, within MPMX20_02939at 3069.854 kb on + strand, within MPMX20_02939at 3069.862 kb on - strand, within MPMX20_02939at 3069.862 kb on - strand, within MPMX20_02939at 3069.862 kb on - strand, within MPMX20_02939at 3069.868 kb on + strand, within MPMX20_02939at 3069.888 kb on - strand, within MPMX20_02939at 3070.105 kb on + strandat 3070.113 kb on - strandat 3070.113 kb on - strandat 3070.237 kb on + strandat 3070.273 kb on - strand, within MPMX20_02940at 3070.322 kb on - strand, within MPMX20_02940at 3070.332 kb on - strand, within MPMX20_02940at 3070.332 kb on - strand, within MPMX20_02940at 3070.347 kb on - strand, within MPMX20_02940at 3070.356 kb on + strand, within MPMX20_02940at 3070.398 kb on - strand, within MPMX20_02940at 3070.403 kb on - strand, within MPMX20_02940at 3070.484 kb on - strand, within MPMX20_02940at 3070.554 kb on + strand, within MPMX20_02940at 3070.561 kb on - strand, within MPMX20_02940at 3070.682 kb on + strand, within MPMX20_02940at 3070.682 kb on + strand, within MPMX20_02940at 3070.682 kb on + strand, within MPMX20_02940at 3070.682 kb on + strand, within MPMX20_02940at 3070.690 kb on + strand, within MPMX20_02940at 3070.701 kb on - strand, within MPMX20_02940at 3070.713 kb on - strand, within MPMX20_02940at 3070.788 kb on - strand, within MPMX20_02940at 3070.838 kb on + strand, within MPMX20_02940at 3070.854 kb on - strand, within MPMX20_02940at 3070.856 kb on + strand, within MPMX20_02940at 3070.934 kb on + strand, within MPMX20_02940at 3070.942 kb on - strand, within MPMX20_02940at 3071.046 kb on + strand, within MPMX20_02940at 3071.065 kb on - strand, within MPMX20_02940

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; inner cut; 0.3% agar
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3,068,744 + MPMX20_02938 0.32 -0.2
3,068,744 + MPMX20_02938 0.32 -1.0
3,068,744 + MPMX20_02938 0.32 +0.2
3,068,749 + MPMX20_02938 0.32 -1.0
3,068,752 + MPMX20_02938 0.32 -1.9
3,068,752 - MPMX20_02938 0.32 -0.5
3,068,752 - MPMX20_02938 0.32 -1.4
3,068,754 + MPMX20_02938 0.33 -0.8
3,068,762 - MPMX20_02938 0.33 -1.3
3,068,762 - MPMX20_02938 0.33 -2.0
3,068,842 - MPMX20_02938 0.39 -1.4
3,068,854 + MPMX20_02938 0.40 -0.9
3,068,854 + MPMX20_02938 0.40 -3.2
3,068,854 + MPMX20_02938 0.40 -1.2
3,068,854 + MPMX20_02938 0.40 -1.6
3,068,877 - MPMX20_02938 0.42 -0.9
3,068,901 + MPMX20_02938 0.43 -1.2
3,068,901 + MPMX20_02938 0.43 +1.2
3,068,925 + MPMX20_02938 0.45 -0.1
3,068,997 - MPMX20_02938 0.50 -2.2
3,069,050 + MPMX20_02938 0.54 -3.3
3,069,122 + MPMX20_02938 0.59 -2.7
3,069,124 + MPMX20_02938 0.60 -2.0
3,069,226 - MPMX20_02938 0.67 +1.2
3,069,425 - MPMX20_02938 0.82 -1.5
3,069,494 - MPMX20_02938 0.87 -1.4
3,069,504 - MPMX20_02938 0.87 -0.6
3,069,511 - MPMX20_02938 0.88 -2.4
3,069,523 + MPMX20_02938 0.89 -2.0
3,069,523 + MPMX20_02938 0.89 -1.8
3,069,531 - MPMX20_02938 0.89 -1.5
3,069,531 - MPMX20_02938 0.89 -1.9
3,069,531 - MPMX20_02938 0.89 -2.5
3,069,636 + -1.7
3,069,636 + -1.6
3,069,636 + -1.5
3,069,644 - -2.6
3,069,680 - +0.6
3,069,710 - -2.9
3,069,783 - MPMX20_02939 0.19 +0.2
3,069,854 + MPMX20_02939 0.35 -2.2
3,069,854 + MPMX20_02939 0.35 +1.5
3,069,854 + MPMX20_02939 0.35 -1.6
3,069,862 - MPMX20_02939 0.37 -1.3
3,069,862 - MPMX20_02939 0.37 -1.5
3,069,862 - MPMX20_02939 0.37 -1.8
3,069,868 + MPMX20_02939 0.38 -1.1
3,069,888 - MPMX20_02939 0.43 -2.6
3,070,105 + -0.4
3,070,113 - -0.4
3,070,113 - +0.5
3,070,237 + -0.1
3,070,273 - MPMX20_02940 0.11 -1.4
3,070,322 - MPMX20_02940 0.15 -0.5
3,070,332 - MPMX20_02940 0.16 +1.2
3,070,332 - MPMX20_02940 0.16 -1.1
3,070,347 - MPMX20_02940 0.17 -1.0
3,070,356 + MPMX20_02940 0.18 -1.4
3,070,398 - MPMX20_02940 0.21 -1.4
3,070,403 - MPMX20_02940 0.21 -1.9
3,070,484 - MPMX20_02940 0.28 -1.4
3,070,554 + MPMX20_02940 0.33 -2.1
3,070,561 - MPMX20_02940 0.34 -1.4
3,070,682 + MPMX20_02940 0.44 -2.3
3,070,682 + MPMX20_02940 0.44 -1.6
3,070,682 + MPMX20_02940 0.44 -1.0
3,070,682 + MPMX20_02940 0.44 -1.5
3,070,690 + MPMX20_02940 0.44 -1.1
3,070,701 - MPMX20_02940 0.45 -1.1
3,070,713 - MPMX20_02940 0.46 -0.7
3,070,788 - MPMX20_02940 0.52 -0.4
3,070,838 + MPMX20_02940 0.56 -0.8
3,070,854 - MPMX20_02940 0.58 -3.2
3,070,856 + MPMX20_02940 0.58 -1.3
3,070,934 + MPMX20_02940 0.64 -0.7
3,070,942 - MPMX20_02940 0.65 -4.3
3,071,046 + MPMX20_02940 0.73 -1.0
3,071,065 - MPMX20_02940 0.75 -2.6

Or see this region's nucleotide sequence