Experiment: Motility test in 1X LB; 1 day; inner cut; 0.3% agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02938 and MPMX20_02939 are separated by 21 nucleotides MPMX20_02939 and MPMX20_02940 overlap by 4 nucleotides
MPMX20_02938: MPMX20_02938 - Flagellum-specific ATP synthase, at 3,068,307 to 3,069,677
_02938
MPMX20_02939: MPMX20_02939 - Flagellar FliJ protein, at 3,069,699 to 3,070,142
_02939
MPMX20_02940: MPMX20_02940 - Flagellar hook-length control protein, at 3,070,139 to 3,071,377
_02940
Position (kb)
3069
3070
3071 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3068.744 kb on + strand, within MPMX20_02938 at 3068.744 kb on + strand, within MPMX20_02938 at 3068.744 kb on + strand, within MPMX20_02938 at 3068.749 kb on + strand, within MPMX20_02938 at 3068.752 kb on + strand, within MPMX20_02938 at 3068.752 kb on - strand, within MPMX20_02938 at 3068.752 kb on - strand, within MPMX20_02938 at 3068.754 kb on + strand, within MPMX20_02938 at 3068.762 kb on - strand, within MPMX20_02938 at 3068.762 kb on - strand, within MPMX20_02938 at 3068.842 kb on - strand, within MPMX20_02938 at 3068.854 kb on + strand, within MPMX20_02938 at 3068.854 kb on + strand, within MPMX20_02938 at 3068.854 kb on + strand, within MPMX20_02938 at 3068.854 kb on + strand, within MPMX20_02938 at 3068.877 kb on - strand, within MPMX20_02938 at 3068.901 kb on + strand, within MPMX20_02938 at 3068.901 kb on + strand, within MPMX20_02938 at 3068.925 kb on + strand, within MPMX20_02938 at 3068.997 kb on - strand, within MPMX20_02938 at 3069.050 kb on + strand, within MPMX20_02938 at 3069.122 kb on + strand, within MPMX20_02938 at 3069.124 kb on + strand, within MPMX20_02938 at 3069.226 kb on - strand, within MPMX20_02938 at 3069.425 kb on - strand, within MPMX20_02938 at 3069.494 kb on - strand, within MPMX20_02938 at 3069.504 kb on - strand, within MPMX20_02938 at 3069.511 kb on - strand, within MPMX20_02938 at 3069.523 kb on + strand, within MPMX20_02938 at 3069.523 kb on + strand, within MPMX20_02938 at 3069.531 kb on - strand, within MPMX20_02938 at 3069.531 kb on - strand, within MPMX20_02938 at 3069.531 kb on - strand, within MPMX20_02938 at 3069.636 kb on + strand at 3069.636 kb on + strand at 3069.636 kb on + strand at 3069.644 kb on - strand at 3069.680 kb on - strand at 3069.710 kb on - strand at 3069.783 kb on - strand, within MPMX20_02939 at 3069.854 kb on + strand, within MPMX20_02939 at 3069.854 kb on + strand, within MPMX20_02939 at 3069.854 kb on + strand, within MPMX20_02939 at 3069.862 kb on - strand, within MPMX20_02939 at 3069.862 kb on - strand, within MPMX20_02939 at 3069.862 kb on - strand, within MPMX20_02939 at 3069.868 kb on + strand, within MPMX20_02939 at 3069.888 kb on - strand, within MPMX20_02939 at 3070.105 kb on + strand at 3070.113 kb on - strand at 3070.113 kb on - strand at 3070.237 kb on + strand at 3070.273 kb on - strand, within MPMX20_02940 at 3070.322 kb on - strand, within MPMX20_02940 at 3070.332 kb on - strand, within MPMX20_02940 at 3070.332 kb on - strand, within MPMX20_02940 at 3070.347 kb on - strand, within MPMX20_02940 at 3070.356 kb on + strand, within MPMX20_02940 at 3070.398 kb on - strand, within MPMX20_02940 at 3070.403 kb on - strand, within MPMX20_02940 at 3070.484 kb on - strand, within MPMX20_02940 at 3070.554 kb on + strand, within MPMX20_02940 at 3070.561 kb on - strand, within MPMX20_02940 at 3070.682 kb on + strand, within MPMX20_02940 at 3070.682 kb on + strand, within MPMX20_02940 at 3070.682 kb on + strand, within MPMX20_02940 at 3070.682 kb on + strand, within MPMX20_02940 at 3070.690 kb on + strand, within MPMX20_02940 at 3070.701 kb on - strand, within MPMX20_02940 at 3070.713 kb on - strand, within MPMX20_02940 at 3070.788 kb on - strand, within MPMX20_02940 at 3070.838 kb on + strand, within MPMX20_02940 at 3070.854 kb on - strand, within MPMX20_02940 at 3070.856 kb on + strand, within MPMX20_02940 at 3070.934 kb on + strand, within MPMX20_02940 at 3070.942 kb on - strand, within MPMX20_02940 at 3071.046 kb on + strand, within MPMX20_02940 at 3071.065 kb on - strand, within MPMX20_02940
Per-strain Table
Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; inner cut; 0.3% agar remove 3,068,744 + MPMX20_02938 0.32 -0.2 3,068,744 + MPMX20_02938 0.32 -1.0 3,068,744 + MPMX20_02938 0.32 +0.2 3,068,749 + MPMX20_02938 0.32 -1.0 3,068,752 + MPMX20_02938 0.32 -1.9 3,068,752 - MPMX20_02938 0.32 -0.5 3,068,752 - MPMX20_02938 0.32 -1.4 3,068,754 + MPMX20_02938 0.33 -0.8 3,068,762 - MPMX20_02938 0.33 -1.3 3,068,762 - MPMX20_02938 0.33 -2.0 3,068,842 - MPMX20_02938 0.39 -1.4 3,068,854 + MPMX20_02938 0.40 -0.9 3,068,854 + MPMX20_02938 0.40 -3.2 3,068,854 + MPMX20_02938 0.40 -1.2 3,068,854 + MPMX20_02938 0.40 -1.6 3,068,877 - MPMX20_02938 0.42 -0.9 3,068,901 + MPMX20_02938 0.43 -1.2 3,068,901 + MPMX20_02938 0.43 +1.2 3,068,925 + MPMX20_02938 0.45 -0.1 3,068,997 - MPMX20_02938 0.50 -2.2 3,069,050 + MPMX20_02938 0.54 -3.3 3,069,122 + MPMX20_02938 0.59 -2.7 3,069,124 + MPMX20_02938 0.60 -2.0 3,069,226 - MPMX20_02938 0.67 +1.2 3,069,425 - MPMX20_02938 0.82 -1.5 3,069,494 - MPMX20_02938 0.87 -1.4 3,069,504 - MPMX20_02938 0.87 -0.6 3,069,511 - MPMX20_02938 0.88 -2.4 3,069,523 + MPMX20_02938 0.89 -2.0 3,069,523 + MPMX20_02938 0.89 -1.8 3,069,531 - MPMX20_02938 0.89 -1.5 3,069,531 - MPMX20_02938 0.89 -1.9 3,069,531 - MPMX20_02938 0.89 -2.5 3,069,636 + -1.7 3,069,636 + -1.6 3,069,636 + -1.5 3,069,644 - -2.6 3,069,680 - +0.6 3,069,710 - -2.9 3,069,783 - MPMX20_02939 0.19 +0.2 3,069,854 + MPMX20_02939 0.35 -2.2 3,069,854 + MPMX20_02939 0.35 +1.5 3,069,854 + MPMX20_02939 0.35 -1.6 3,069,862 - MPMX20_02939 0.37 -1.3 3,069,862 - MPMX20_02939 0.37 -1.5 3,069,862 - MPMX20_02939 0.37 -1.8 3,069,868 + MPMX20_02939 0.38 -1.1 3,069,888 - MPMX20_02939 0.43 -2.6 3,070,105 + -0.4 3,070,113 - -0.4 3,070,113 - +0.5 3,070,237 + -0.1 3,070,273 - MPMX20_02940 0.11 -1.4 3,070,322 - MPMX20_02940 0.15 -0.5 3,070,332 - MPMX20_02940 0.16 +1.2 3,070,332 - MPMX20_02940 0.16 -1.1 3,070,347 - MPMX20_02940 0.17 -1.0 3,070,356 + MPMX20_02940 0.18 -1.4 3,070,398 - MPMX20_02940 0.21 -1.4 3,070,403 - MPMX20_02940 0.21 -1.9 3,070,484 - MPMX20_02940 0.28 -1.4 3,070,554 + MPMX20_02940 0.33 -2.1 3,070,561 - MPMX20_02940 0.34 -1.4 3,070,682 + MPMX20_02940 0.44 -2.3 3,070,682 + MPMX20_02940 0.44 -1.6 3,070,682 + MPMX20_02940 0.44 -1.0 3,070,682 + MPMX20_02940 0.44 -1.5 3,070,690 + MPMX20_02940 0.44 -1.1 3,070,701 - MPMX20_02940 0.45 -1.1 3,070,713 - MPMX20_02940 0.46 -0.7 3,070,788 - MPMX20_02940 0.52 -0.4 3,070,838 + MPMX20_02940 0.56 -0.8 3,070,854 - MPMX20_02940 0.58 -3.2 3,070,856 + MPMX20_02940 0.58 -1.3 3,070,934 + MPMX20_02940 0.64 -0.7 3,070,942 - MPMX20_02940 0.65 -4.3 3,071,046 + MPMX20_02940 0.73 -1.0 3,071,065 - MPMX20_02940 0.75 -2.6
Or see this region's nucleotide sequence