Experiment: Motility test in 1X LB; 1 day; inner cut; 0.3% agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02935 and MPMX20_02936 overlap by 8 nucleotides MPMX20_02936 and MPMX20_02937 overlap by 8 nucleotides MPMX20_02937 and MPMX20_02938 overlap by 1 nucleotides
MPMX20_02935: MPMX20_02935 - Flagellar M-ring protein, at 3,064,937 to 3,066,616
_02935
MPMX20_02936: MPMX20_02936 - Flagellar motor switch protein FliG, at 3,066,609 to 3,067,607
_02936
MPMX20_02937: MPMX20_02937 - Flagellar assembly protein FliH, at 3,067,600 to 3,068,307
_02937
MPMX20_02938: MPMX20_02938 - Flagellum-specific ATP synthase, at 3,068,307 to 3,069,677
_02938
Position (kb)
3067
3068
3069 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3066.606 kb on + strand at 3066.650 kb on + strand at 3066.686 kb on - strand at 3066.769 kb on + strand, within MPMX20_02936 at 3066.772 kb on - strand, within MPMX20_02936 at 3066.787 kb on - strand, within MPMX20_02936 at 3066.804 kb on - strand, within MPMX20_02936 at 3066.854 kb on + strand, within MPMX20_02936 at 3066.854 kb on + strand, within MPMX20_02936 at 3066.857 kb on - strand, within MPMX20_02936 at 3066.868 kb on + strand, within MPMX20_02936 at 3066.936 kb on - strand, within MPMX20_02936 at 3066.951 kb on - strand, within MPMX20_02936 at 3066.964 kb on + strand, within MPMX20_02936 at 3067.019 kb on + strand, within MPMX20_02936 at 3067.086 kb on - strand, within MPMX20_02936 at 3067.108 kb on - strand, within MPMX20_02936 at 3067.108 kb on - strand, within MPMX20_02936 at 3067.110 kb on + strand, within MPMX20_02936 at 3067.156 kb on - strand, within MPMX20_02936 at 3067.397 kb on + strand, within MPMX20_02936 at 3067.441 kb on + strand, within MPMX20_02936 at 3067.590 kb on + strand at 3067.590 kb on + strand at 3067.712 kb on + strand, within MPMX20_02937 at 3067.714 kb on + strand, within MPMX20_02937 at 3067.729 kb on + strand, within MPMX20_02937 at 3067.737 kb on - strand, within MPMX20_02937 at 3067.782 kb on + strand, within MPMX20_02937 at 3067.798 kb on - strand, within MPMX20_02937 at 3067.851 kb on - strand, within MPMX20_02937 at 3067.855 kb on + strand, within MPMX20_02937 at 3067.857 kb on - strand, within MPMX20_02937 at 3067.868 kb on + strand, within MPMX20_02937 at 3067.959 kb on - strand, within MPMX20_02937 at 3067.961 kb on + strand, within MPMX20_02937 at 3067.970 kb on + strand, within MPMX20_02937 at 3067.978 kb on - strand, within MPMX20_02937 at 3068.034 kb on + strand, within MPMX20_02937 at 3068.034 kb on + strand, within MPMX20_02937 at 3068.042 kb on - strand, within MPMX20_02937 at 3068.088 kb on + strand, within MPMX20_02937 at 3068.126 kb on + strand, within MPMX20_02937 at 3068.127 kb on + strand, within MPMX20_02937 at 3068.127 kb on + strand, within MPMX20_02937 at 3068.220 kb on + strand, within MPMX20_02937 at 3068.264 kb on + strand at 3068.301 kb on + strand at 3068.369 kb on + strand at 3068.436 kb on - strand at 3068.436 kb on - strand at 3068.485 kb on - strand, within MPMX20_02938 at 3068.507 kb on - strand, within MPMX20_02938 at 3068.548 kb on + strand, within MPMX20_02938 at 3068.571 kb on - strand, within MPMX20_02938 at 3068.576 kb on - strand, within MPMX20_02938 at 3068.652 kb on - strand, within MPMX20_02938 at 3068.652 kb on - strand, within MPMX20_02938 at 3068.662 kb on - strand, within MPMX20_02938 at 3068.693 kb on - strand, within MPMX20_02938 at 3068.744 kb on + strand, within MPMX20_02938 at 3068.744 kb on + strand, within MPMX20_02938 at 3068.744 kb on + strand, within MPMX20_02938 at 3068.749 kb on + strand, within MPMX20_02938 at 3068.752 kb on + strand, within MPMX20_02938 at 3068.752 kb on - strand, within MPMX20_02938 at 3068.752 kb on - strand, within MPMX20_02938 at 3068.754 kb on + strand, within MPMX20_02938 at 3068.762 kb on - strand, within MPMX20_02938 at 3068.762 kb on - strand, within MPMX20_02938 at 3068.842 kb on - strand, within MPMX20_02938 at 3068.854 kb on + strand, within MPMX20_02938 at 3068.854 kb on + strand, within MPMX20_02938 at 3068.854 kb on + strand, within MPMX20_02938 at 3068.854 kb on + strand, within MPMX20_02938 at 3068.877 kb on - strand, within MPMX20_02938 at 3068.901 kb on + strand, within MPMX20_02938 at 3068.901 kb on + strand, within MPMX20_02938 at 3068.925 kb on + strand, within MPMX20_02938 at 3068.997 kb on - strand, within MPMX20_02938 at 3069.050 kb on + strand, within MPMX20_02938 at 3069.122 kb on + strand, within MPMX20_02938 at 3069.124 kb on + strand, within MPMX20_02938
Per-strain Table
Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; inner cut; 0.3% agar remove 3,066,606 + +0.4 3,066,650 + -2.0 3,066,686 - -1.7 3,066,769 + MPMX20_02936 0.16 +0.2 3,066,772 - MPMX20_02936 0.16 +0.2 3,066,787 - MPMX20_02936 0.18 -1.0 3,066,804 - MPMX20_02936 0.20 -0.9 3,066,854 + MPMX20_02936 0.25 -0.6 3,066,854 + MPMX20_02936 0.25 -1.6 3,066,857 - MPMX20_02936 0.25 -3.5 3,066,868 + MPMX20_02936 0.26 -0.8 3,066,936 - MPMX20_02936 0.33 -0.8 3,066,951 - MPMX20_02936 0.34 -1.2 3,066,964 + MPMX20_02936 0.36 -0.5 3,067,019 + MPMX20_02936 0.41 -0.8 3,067,086 - MPMX20_02936 0.48 -0.8 3,067,108 - MPMX20_02936 0.50 -1.4 3,067,108 - MPMX20_02936 0.50 -1.2 3,067,110 + MPMX20_02936 0.50 -2.2 3,067,156 - MPMX20_02936 0.55 -1.2 3,067,397 + MPMX20_02936 0.79 -2.2 3,067,441 + MPMX20_02936 0.83 -1.1 3,067,590 + -0.8 3,067,590 + -1.2 3,067,712 + MPMX20_02937 0.16 -0.2 3,067,714 + MPMX20_02937 0.16 -1.6 3,067,729 + MPMX20_02937 0.18 -2.2 3,067,737 - MPMX20_02937 0.19 -0.8 3,067,782 + MPMX20_02937 0.26 -1.5 3,067,798 - MPMX20_02937 0.28 -1.6 3,067,851 - MPMX20_02937 0.35 -0.6 3,067,855 + MPMX20_02937 0.36 -0.2 3,067,857 - MPMX20_02937 0.36 -1.2 3,067,868 + MPMX20_02937 0.38 -0.4 3,067,959 - MPMX20_02937 0.51 -0.4 3,067,961 + MPMX20_02937 0.51 -0.9 3,067,970 + MPMX20_02937 0.52 -2.9 3,067,978 - MPMX20_02937 0.53 -2.2 3,068,034 + MPMX20_02937 0.61 +0.3 3,068,034 + MPMX20_02937 0.61 -1.9 3,068,042 - MPMX20_02937 0.62 -1.0 3,068,088 + MPMX20_02937 0.69 -1.0 3,068,126 + MPMX20_02937 0.74 -1.5 3,068,127 + MPMX20_02937 0.74 -0.8 3,068,127 + MPMX20_02937 0.74 -0.6 3,068,220 + MPMX20_02937 0.88 -2.4 3,068,264 + -0.4 3,068,301 + -0.8 3,068,369 + +1.2 3,068,436 - -1.4 3,068,436 - -1.4 3,068,485 - MPMX20_02938 0.13 -2.0 3,068,507 - MPMX20_02938 0.15 -1.1 3,068,548 + MPMX20_02938 0.18 -1.3 3,068,571 - MPMX20_02938 0.19 -1.6 3,068,576 - MPMX20_02938 0.20 -0.5 3,068,652 - MPMX20_02938 0.25 -0.2 3,068,652 - MPMX20_02938 0.25 +0.2 3,068,662 - MPMX20_02938 0.26 -0.8 3,068,693 - MPMX20_02938 0.28 -2.2 3,068,744 + MPMX20_02938 0.32 -0.2 3,068,744 + MPMX20_02938 0.32 -1.0 3,068,744 + MPMX20_02938 0.32 +0.2 3,068,749 + MPMX20_02938 0.32 -1.0 3,068,752 + MPMX20_02938 0.32 -1.9 3,068,752 - MPMX20_02938 0.32 -0.5 3,068,752 - MPMX20_02938 0.32 -1.4 3,068,754 + MPMX20_02938 0.33 -0.8 3,068,762 - MPMX20_02938 0.33 -1.3 3,068,762 - MPMX20_02938 0.33 -2.0 3,068,842 - MPMX20_02938 0.39 -1.4 3,068,854 + MPMX20_02938 0.40 -0.9 3,068,854 + MPMX20_02938 0.40 -3.2 3,068,854 + MPMX20_02938 0.40 -1.2 3,068,854 + MPMX20_02938 0.40 -1.6 3,068,877 - MPMX20_02938 0.42 -0.9 3,068,901 + MPMX20_02938 0.43 -1.2 3,068,901 + MPMX20_02938 0.43 +1.2 3,068,925 + MPMX20_02938 0.45 -0.2 3,068,997 - MPMX20_02938 0.50 -2.2 3,069,050 + MPMX20_02938 0.54 -3.3 3,069,122 + MPMX20_02938 0.59 -2.7 3,069,124 + MPMX20_02938 0.60 -2.0
Or see this region's nucleotide sequence