Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02937

Experiment: Motility test in 1X LB; 1 day; inner cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02935 and MPMX20_02936 overlap by 8 nucleotidesMPMX20_02936 and MPMX20_02937 overlap by 8 nucleotidesMPMX20_02937 and MPMX20_02938 overlap by 1 nucleotides MPMX20_02935: MPMX20_02935 - Flagellar M-ring protein, at 3,064,937 to 3,066,616 _02935 MPMX20_02936: MPMX20_02936 - Flagellar motor switch protein FliG, at 3,066,609 to 3,067,607 _02936 MPMX20_02937: MPMX20_02937 - Flagellar assembly protein FliH, at 3,067,600 to 3,068,307 _02937 MPMX20_02938: MPMX20_02938 - Flagellum-specific ATP synthase, at 3,068,307 to 3,069,677 _02938 Position (kb) 3067 3068 3069Strain fitness (log2 ratio) -3 -2 -1 0 1at 3066.606 kb on + strandat 3066.650 kb on + strandat 3066.686 kb on - strandat 3066.769 kb on + strand, within MPMX20_02936at 3066.772 kb on - strand, within MPMX20_02936at 3066.787 kb on - strand, within MPMX20_02936at 3066.804 kb on - strand, within MPMX20_02936at 3066.854 kb on + strand, within MPMX20_02936at 3066.854 kb on + strand, within MPMX20_02936at 3066.857 kb on - strand, within MPMX20_02936at 3066.868 kb on + strand, within MPMX20_02936at 3066.936 kb on - strand, within MPMX20_02936at 3066.951 kb on - strand, within MPMX20_02936at 3066.964 kb on + strand, within MPMX20_02936at 3067.019 kb on + strand, within MPMX20_02936at 3067.086 kb on - strand, within MPMX20_02936at 3067.108 kb on - strand, within MPMX20_02936at 3067.108 kb on - strand, within MPMX20_02936at 3067.110 kb on + strand, within MPMX20_02936at 3067.156 kb on - strand, within MPMX20_02936at 3067.397 kb on + strand, within MPMX20_02936at 3067.441 kb on + strand, within MPMX20_02936at 3067.590 kb on + strandat 3067.590 kb on + strandat 3067.712 kb on + strand, within MPMX20_02937at 3067.714 kb on + strand, within MPMX20_02937at 3067.729 kb on + strand, within MPMX20_02937at 3067.737 kb on - strand, within MPMX20_02937at 3067.782 kb on + strand, within MPMX20_02937at 3067.798 kb on - strand, within MPMX20_02937at 3067.851 kb on - strand, within MPMX20_02937at 3067.855 kb on + strand, within MPMX20_02937at 3067.857 kb on - strand, within MPMX20_02937at 3067.868 kb on + strand, within MPMX20_02937at 3067.959 kb on - strand, within MPMX20_02937at 3067.961 kb on + strand, within MPMX20_02937at 3067.970 kb on + strand, within MPMX20_02937at 3067.978 kb on - strand, within MPMX20_02937at 3068.034 kb on + strand, within MPMX20_02937at 3068.034 kb on + strand, within MPMX20_02937at 3068.042 kb on - strand, within MPMX20_02937at 3068.088 kb on + strand, within MPMX20_02937at 3068.126 kb on + strand, within MPMX20_02937at 3068.127 kb on + strand, within MPMX20_02937at 3068.127 kb on + strand, within MPMX20_02937at 3068.220 kb on + strand, within MPMX20_02937at 3068.264 kb on + strandat 3068.301 kb on + strandat 3068.369 kb on + strandat 3068.436 kb on - strandat 3068.436 kb on - strandat 3068.485 kb on - strand, within MPMX20_02938at 3068.507 kb on - strand, within MPMX20_02938at 3068.548 kb on + strand, within MPMX20_02938at 3068.571 kb on - strand, within MPMX20_02938at 3068.576 kb on - strand, within MPMX20_02938at 3068.652 kb on - strand, within MPMX20_02938at 3068.652 kb on - strand, within MPMX20_02938at 3068.662 kb on - strand, within MPMX20_02938at 3068.693 kb on - strand, within MPMX20_02938at 3068.744 kb on + strand, within MPMX20_02938at 3068.744 kb on + strand, within MPMX20_02938at 3068.744 kb on + strand, within MPMX20_02938at 3068.749 kb on + strand, within MPMX20_02938at 3068.752 kb on + strand, within MPMX20_02938at 3068.752 kb on - strand, within MPMX20_02938at 3068.752 kb on - strand, within MPMX20_02938at 3068.754 kb on + strand, within MPMX20_02938at 3068.762 kb on - strand, within MPMX20_02938at 3068.762 kb on - strand, within MPMX20_02938at 3068.842 kb on - strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.854 kb on + strand, within MPMX20_02938at 3068.877 kb on - strand, within MPMX20_02938at 3068.901 kb on + strand, within MPMX20_02938at 3068.901 kb on + strand, within MPMX20_02938at 3068.925 kb on + strand, within MPMX20_02938at 3068.997 kb on - strand, within MPMX20_02938at 3069.050 kb on + strand, within MPMX20_02938at 3069.122 kb on + strand, within MPMX20_02938at 3069.124 kb on + strand, within MPMX20_02938

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; inner cut; 0.3% agar
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3,066,606 + +0.4
3,066,650 + -2.0
3,066,686 - -1.7
3,066,769 + MPMX20_02936 0.16 +0.2
3,066,772 - MPMX20_02936 0.16 +0.2
3,066,787 - MPMX20_02936 0.18 -1.0
3,066,804 - MPMX20_02936 0.20 -0.9
3,066,854 + MPMX20_02936 0.25 -0.6
3,066,854 + MPMX20_02936 0.25 -1.6
3,066,857 - MPMX20_02936 0.25 -3.5
3,066,868 + MPMX20_02936 0.26 -0.8
3,066,936 - MPMX20_02936 0.33 -0.8
3,066,951 - MPMX20_02936 0.34 -1.2
3,066,964 + MPMX20_02936 0.36 -0.5
3,067,019 + MPMX20_02936 0.41 -0.8
3,067,086 - MPMX20_02936 0.48 -0.8
3,067,108 - MPMX20_02936 0.50 -1.4
3,067,108 - MPMX20_02936 0.50 -1.2
3,067,110 + MPMX20_02936 0.50 -2.2
3,067,156 - MPMX20_02936 0.55 -1.2
3,067,397 + MPMX20_02936 0.79 -2.2
3,067,441 + MPMX20_02936 0.83 -1.1
3,067,590 + -0.8
3,067,590 + -1.2
3,067,712 + MPMX20_02937 0.16 -0.2
3,067,714 + MPMX20_02937 0.16 -1.6
3,067,729 + MPMX20_02937 0.18 -2.2
3,067,737 - MPMX20_02937 0.19 -0.8
3,067,782 + MPMX20_02937 0.26 -1.5
3,067,798 - MPMX20_02937 0.28 -1.6
3,067,851 - MPMX20_02937 0.35 -0.6
3,067,855 + MPMX20_02937 0.36 -0.2
3,067,857 - MPMX20_02937 0.36 -1.2
3,067,868 + MPMX20_02937 0.38 -0.4
3,067,959 - MPMX20_02937 0.51 -0.4
3,067,961 + MPMX20_02937 0.51 -0.9
3,067,970 + MPMX20_02937 0.52 -2.9
3,067,978 - MPMX20_02937 0.53 -2.2
3,068,034 + MPMX20_02937 0.61 +0.3
3,068,034 + MPMX20_02937 0.61 -1.9
3,068,042 - MPMX20_02937 0.62 -1.0
3,068,088 + MPMX20_02937 0.69 -1.0
3,068,126 + MPMX20_02937 0.74 -1.5
3,068,127 + MPMX20_02937 0.74 -0.8
3,068,127 + MPMX20_02937 0.74 -0.6
3,068,220 + MPMX20_02937 0.88 -2.4
3,068,264 + -0.4
3,068,301 + -0.8
3,068,369 + +1.2
3,068,436 - -1.4
3,068,436 - -1.4
3,068,485 - MPMX20_02938 0.13 -2.0
3,068,507 - MPMX20_02938 0.15 -1.1
3,068,548 + MPMX20_02938 0.18 -1.3
3,068,571 - MPMX20_02938 0.19 -1.6
3,068,576 - MPMX20_02938 0.20 -0.5
3,068,652 - MPMX20_02938 0.25 -0.2
3,068,652 - MPMX20_02938 0.25 +0.2
3,068,662 - MPMX20_02938 0.26 -0.8
3,068,693 - MPMX20_02938 0.28 -2.2
3,068,744 + MPMX20_02938 0.32 -0.2
3,068,744 + MPMX20_02938 0.32 -1.0
3,068,744 + MPMX20_02938 0.32 +0.2
3,068,749 + MPMX20_02938 0.32 -1.0
3,068,752 + MPMX20_02938 0.32 -1.9
3,068,752 - MPMX20_02938 0.32 -0.5
3,068,752 - MPMX20_02938 0.32 -1.4
3,068,754 + MPMX20_02938 0.33 -0.8
3,068,762 - MPMX20_02938 0.33 -1.3
3,068,762 - MPMX20_02938 0.33 -2.0
3,068,842 - MPMX20_02938 0.39 -1.4
3,068,854 + MPMX20_02938 0.40 -0.9
3,068,854 + MPMX20_02938 0.40 -3.2
3,068,854 + MPMX20_02938 0.40 -1.2
3,068,854 + MPMX20_02938 0.40 -1.6
3,068,877 - MPMX20_02938 0.42 -0.9
3,068,901 + MPMX20_02938 0.43 -1.2
3,068,901 + MPMX20_02938 0.43 +1.2
3,068,925 + MPMX20_02938 0.45 -0.2
3,068,997 - MPMX20_02938 0.50 -2.2
3,069,050 + MPMX20_02938 0.54 -3.3
3,069,122 + MPMX20_02938 0.59 -2.7
3,069,124 + MPMX20_02938 0.60 -2.0

Or see this region's nucleotide sequence