Experiment: Motility test in 1X LB; 1 day; inner cut; 0.3% agar
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02795 and MPMX20_02796 are separated by 430 nucleotides MPMX20_02796 and MPMX20_02797 are separated by 189 nucleotides MPMX20_02797 and MPMX20_02798 are separated by 19 nucleotides
MPMX20_02795: MPMX20_02795 - hypothetical protein, at 2,952,301 to 2,952,873
_02795
MPMX20_02796: MPMX20_02796 - C4-dicarboxylate transport protein, at 2,953,304 to 2,954,563
_02796
MPMX20_02797: MPMX20_02797 - Chemotaxis protein CheW, at 2,954,753 to 2,955,256
_02797
MPMX20_02798: MPMX20_02798 - Chemotaxis protein CheA, at 2,955,276 to 2,957,309
_02798
Position (kb)
2953
2954
2955 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2952.314 kb on - strand at 2952.359 kb on - strand, within MPMX20_02795 at 2952.390 kb on + strand, within MPMX20_02795 at 2952.392 kb on + strand, within MPMX20_02795 at 2952.482 kb on + strand, within MPMX20_02795 at 2952.488 kb on + strand, within MPMX20_02795 at 2952.496 kb on - strand, within MPMX20_02795 at 2952.511 kb on - strand, within MPMX20_02795 at 2952.524 kb on - strand, within MPMX20_02795 at 2952.536 kb on - strand, within MPMX20_02795 at 2952.545 kb on - strand, within MPMX20_02795 at 2952.605 kb on - strand, within MPMX20_02795 at 2952.652 kb on + strand, within MPMX20_02795 at 2952.652 kb on + strand, within MPMX20_02795 at 2952.692 kb on - strand, within MPMX20_02795 at 2952.707 kb on + strand, within MPMX20_02795 at 2952.734 kb on + strand, within MPMX20_02795 at 2952.766 kb on + strand, within MPMX20_02795 at 2952.819 kb on - strand at 2952.821 kb on - strand at 2952.827 kb on + strand at 2952.840 kb on + strand at 2952.840 kb on + strand at 2952.892 kb on - strand at 2953.017 kb on + strand at 2953.017 kb on + strand at 2953.017 kb on + strand at 2953.025 kb on - strand at 2953.025 kb on - strand at 2953.025 kb on - strand at 2953.025 kb on - strand at 2953.106 kb on + strand at 2953.107 kb on + strand at 2953.114 kb on - strand at 2953.270 kb on + strand at 2953.311 kb on + strand at 2953.319 kb on - strand at 2953.389 kb on + strand at 2953.410 kb on - strand at 2953.488 kb on - strand, within MPMX20_02796 at 2953.493 kb on - strand, within MPMX20_02796 at 2953.514 kb on - strand, within MPMX20_02796 at 2953.674 kb on + strand, within MPMX20_02796 at 2953.674 kb on + strand, within MPMX20_02796 at 2953.845 kb on + strand, within MPMX20_02796 at 2954.037 kb on + strand, within MPMX20_02796 at 2954.074 kb on - strand, within MPMX20_02796 at 2954.093 kb on + strand, within MPMX20_02796 at 2954.150 kb on - strand, within MPMX20_02796 at 2954.197 kb on + strand, within MPMX20_02796 at 2954.204 kb on + strand, within MPMX20_02796 at 2954.211 kb on + strand, within MPMX20_02796 at 2954.211 kb on + strand, within MPMX20_02796 at 2954.211 kb on + strand, within MPMX20_02796 at 2954.211 kb on + strand, within MPMX20_02796 at 2954.219 kb on - strand, within MPMX20_02796 at 2954.226 kb on + strand, within MPMX20_02796 at 2954.226 kb on + strand, within MPMX20_02796 at 2954.226 kb on + strand, within MPMX20_02796 at 2954.226 kb on + strand, within MPMX20_02796 at 2954.229 kb on + strand, within MPMX20_02796 at 2954.234 kb on - strand, within MPMX20_02796 at 2954.234 kb on - strand, within MPMX20_02796 at 2954.234 kb on - strand, within MPMX20_02796 at 2954.242 kb on - strand, within MPMX20_02796 at 2954.244 kb on - strand, within MPMX20_02796 at 2954.282 kb on + strand, within MPMX20_02796 at 2954.287 kb on - strand, within MPMX20_02796 at 2954.298 kb on + strand, within MPMX20_02796 at 2954.306 kb on - strand, within MPMX20_02796 at 2954.348 kb on - strand, within MPMX20_02796 at 2954.589 kb on + strand at 2954.589 kb on + strand at 2954.589 kb on + strand at 2954.589 kb on + strand at 2954.597 kb on - strand at 2954.597 kb on - strand at 2954.597 kb on - strand at 2954.597 kb on - strand at 2954.633 kb on + strand at 2954.653 kb on - strand at 2954.735 kb on - strand at 2954.758 kb on - strand at 2954.796 kb on + strand at 2954.799 kb on - strand at 2954.809 kb on - strand, within MPMX20_02797 at 2954.809 kb on - strand, within MPMX20_02797 at 2954.921 kb on + strand, within MPMX20_02797 at 2954.930 kb on + strand, within MPMX20_02797 at 2954.964 kb on + strand, within MPMX20_02797 at 2955.046 kb on + strand, within MPMX20_02797 at 2955.046 kb on + strand, within MPMX20_02797 at 2955.046 kb on + strand, within MPMX20_02797 at 2955.046 kb on + strand, within MPMX20_02797 at 2955.051 kb on + strand, within MPMX20_02797 at 2955.051 kb on + strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.054 kb on - strand, within MPMX20_02797 at 2955.061 kb on + strand, within MPMX20_02797 at 2955.061 kb on + strand, within MPMX20_02797 at 2955.061 kb on + strand, within MPMX20_02797 at 2955.061 kb on + strand, within MPMX20_02797 at 2955.088 kb on - strand, within MPMX20_02797 at 2955.116 kb on + strand, within MPMX20_02797 at 2955.118 kb on + strand, within MPMX20_02797 at 2955.126 kb on - strand, within MPMX20_02797 at 2955.172 kb on + strand, within MPMX20_02797 at 2955.182 kb on + strand, within MPMX20_02797 at 2955.203 kb on + strand, within MPMX20_02797 at 2955.264 kb on + strand at 2955.271 kb on - strand at 2955.283 kb on + strand at 2955.283 kb on + strand at 2955.344 kb on + strand at 2955.357 kb on - strand at 2955.368 kb on - strand at 2955.368 kb on - strand at 2955.368 kb on - strand at 2955.424 kb on + strand at 2955.427 kb on + strand at 2955.427 kb on + strand at 2955.432 kb on - strand at 2955.435 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; inner cut; 0.3% agar remove 2,952,314 - -0.5 2,952,359 - MPMX20_02795 0.10 +0.0 2,952,390 + MPMX20_02795 0.16 -0.8 2,952,392 + MPMX20_02795 0.16 +0.6 2,952,482 + MPMX20_02795 0.32 +2.2 2,952,488 + MPMX20_02795 0.33 +0.4 2,952,496 - MPMX20_02795 0.34 +0.2 2,952,511 - MPMX20_02795 0.37 +0.5 2,952,524 - MPMX20_02795 0.39 +1.2 2,952,536 - MPMX20_02795 0.41 -1.0 2,952,545 - MPMX20_02795 0.43 +1.2 2,952,605 - MPMX20_02795 0.53 -0.8 2,952,652 + MPMX20_02795 0.61 +0.4 2,952,652 + MPMX20_02795 0.61 -0.4 2,952,692 - MPMX20_02795 0.68 -0.4 2,952,707 + MPMX20_02795 0.71 -0.5 2,952,734 + MPMX20_02795 0.76 +0.8 2,952,766 + MPMX20_02795 0.81 -1.6 2,952,819 - +0.4 2,952,821 - -0.3 2,952,827 + -0.2 2,952,840 + -1.1 2,952,840 + +0.4 2,952,892 - +0.2 2,953,017 + -0.5 2,953,017 + +2.2 2,953,017 + -0.1 2,953,025 - -0.2 2,953,025 - +1.2 2,953,025 - +1.8 2,953,025 - +0.4 2,953,106 + -0.9 2,953,107 + -0.0 2,953,114 - +0.4 2,953,270 + +0.7 2,953,311 + -0.3 2,953,319 - +0.3 2,953,389 + -0.3 2,953,410 - +1.3 2,953,488 - MPMX20_02796 0.15 +0.4 2,953,493 - MPMX20_02796 0.15 +0.7 2,953,514 - MPMX20_02796 0.17 +0.3 2,953,674 + MPMX20_02796 0.29 +0.8 2,953,674 + MPMX20_02796 0.29 +0.8 2,953,845 + MPMX20_02796 0.43 -0.1 2,954,037 + MPMX20_02796 0.58 -0.5 2,954,074 - MPMX20_02796 0.61 -1.6 2,954,093 + MPMX20_02796 0.63 +0.3 2,954,150 - MPMX20_02796 0.67 -0.1 2,954,197 + MPMX20_02796 0.71 +0.9 2,954,204 + MPMX20_02796 0.71 -1.6 2,954,211 + MPMX20_02796 0.72 -0.9 2,954,211 + MPMX20_02796 0.72 -0.1 2,954,211 + MPMX20_02796 0.72 +0.9 2,954,211 + MPMX20_02796 0.72 -0.8 2,954,219 - MPMX20_02796 0.73 -1.0 2,954,226 + MPMX20_02796 0.73 +1.0 2,954,226 + MPMX20_02796 0.73 +0.0 2,954,226 + MPMX20_02796 0.73 -0.6 2,954,226 + MPMX20_02796 0.73 +0.5 2,954,229 + MPMX20_02796 0.73 +1.8 2,954,234 - MPMX20_02796 0.74 -0.2 2,954,234 - MPMX20_02796 0.74 +0.3 2,954,234 - MPMX20_02796 0.74 +0.4 2,954,242 - MPMX20_02796 0.74 +0.1 2,954,244 - MPMX20_02796 0.75 -0.6 2,954,282 + MPMX20_02796 0.78 -0.8 2,954,287 - MPMX20_02796 0.78 -0.5 2,954,298 + MPMX20_02796 0.79 -2.0 2,954,306 - MPMX20_02796 0.80 +0.0 2,954,348 - MPMX20_02796 0.83 -1.3 2,954,589 + +0.4 2,954,589 + +0.2 2,954,589 + -0.1 2,954,589 + -0.2 2,954,597 - +1.2 2,954,597 - +0.3 2,954,597 - +0.3 2,954,597 - +1.7 2,954,633 + -0.9 2,954,653 - -2.1 2,954,735 - +0.2 2,954,758 - +1.3 2,954,796 + -0.7 2,954,799 - +0.2 2,954,809 - MPMX20_02797 0.11 +0.3 2,954,809 - MPMX20_02797 0.11 +0.7 2,954,921 + MPMX20_02797 0.33 -2.3 2,954,930 + MPMX20_02797 0.35 -2.5 2,954,964 + MPMX20_02797 0.42 -3.8 2,955,046 + MPMX20_02797 0.58 -0.8 2,955,046 + MPMX20_02797 0.58 -3.7 2,955,046 + MPMX20_02797 0.58 -0.6 2,955,046 + MPMX20_02797 0.58 -0.3 2,955,051 + MPMX20_02797 0.59 -0.6 2,955,051 + MPMX20_02797 0.59 -1.3 2,955,054 - MPMX20_02797 0.60 -2.5 2,955,054 - MPMX20_02797 0.60 -2.0 2,955,054 - MPMX20_02797 0.60 -1.7 2,955,054 - MPMX20_02797 0.60 -1.1 2,955,054 - MPMX20_02797 0.60 -1.0 2,955,061 + MPMX20_02797 0.61 -1.4 2,955,061 + MPMX20_02797 0.61 -2.1 2,955,061 + MPMX20_02797 0.61 -2.4 2,955,061 + MPMX20_02797 0.61 -4.2 2,955,088 - MPMX20_02797 0.66 -1.4 2,955,116 + MPMX20_02797 0.72 +0.4 2,955,118 + MPMX20_02797 0.72 -1.7 2,955,126 - MPMX20_02797 0.74 -1.1 2,955,172 + MPMX20_02797 0.83 -2.0 2,955,182 + MPMX20_02797 0.85 +0.2 2,955,203 + MPMX20_02797 0.89 -2.0 2,955,264 + -2.2 2,955,271 - -1.1 2,955,283 + -0.4 2,955,283 + -2.1 2,955,344 + -0.9 2,955,357 - -1.4 2,955,368 - -0.7 2,955,368 - -2.3 2,955,368 - -1.5 2,955,424 + -2.0 2,955,427 + -1.1 2,955,427 + -0.8 2,955,432 - -1.1 2,955,435 - -1.1
Or see this region's nucleotide sequence