Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01761

Experiment: Motility test in 1X LB; 1 day; inner cut; 0.3% agar

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01760 and MPMX20_01761 are separated by 75 nucleotidesMPMX20_01761 and MPMX20_01762 are separated by 14 nucleotides MPMX20_01760: MPMX20_01760 - Peptidoglycan hydrolase FlgJ, at 1,850,606 to 1,851,559 _01760 MPMX20_01761: MPMX20_01761 - Flagellar hook-associated protein 1, at 1,851,635 to 1,853,275 _01761 MPMX20_01762: MPMX20_01762 - Flagellar hook-associated protein 3, at 1,853,290 to 1,854,243 _01762 Position (kb) 1851 1852 1853 1854Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1850.681 kb on + strandat 1850.681 kb on + strandat 1850.689 kb on - strandat 1850.796 kb on - strand, within MPMX20_01760at 1850.796 kb on - strand, within MPMX20_01760at 1850.843 kb on + strand, within MPMX20_01760at 1850.865 kb on + strand, within MPMX20_01760at 1850.904 kb on - strand, within MPMX20_01760at 1850.913 kb on + strand, within MPMX20_01760at 1850.991 kb on - strand, within MPMX20_01760at 1851.014 kb on + strand, within MPMX20_01760at 1851.118 kb on - strand, within MPMX20_01760at 1851.152 kb on + strand, within MPMX20_01760at 1851.163 kb on + strand, within MPMX20_01760at 1851.251 kb on - strand, within MPMX20_01760at 1851.255 kb on + strand, within MPMX20_01760at 1851.301 kb on + strand, within MPMX20_01760at 1851.301 kb on + strand, within MPMX20_01760at 1851.354 kb on + strand, within MPMX20_01760at 1851.359 kb on + strand, within MPMX20_01760at 1851.362 kb on - strand, within MPMX20_01760at 1851.362 kb on - strand, within MPMX20_01760at 1851.400 kb on + strand, within MPMX20_01760at 1851.408 kb on + strand, within MPMX20_01760at 1851.431 kb on - strand, within MPMX20_01760at 1851.517 kb on + strandat 1851.640 kb on - strandat 1851.667 kb on + strandat 1851.667 kb on + strandat 1851.667 kb on + strandat 1851.667 kb on + strandat 1851.667 kb on + strandat 1851.667 kb on + strandat 1851.667 kb on + strandat 1851.672 kb on + strandat 1851.672 kb on + strandat 1851.672 kb on + strandat 1851.675 kb on - strandat 1851.675 kb on - strandat 1851.680 kb on - strandat 1851.680 kb on - strandat 1851.680 kb on - strandat 1851.680 kb on - strandat 1851.731 kb on + strandat 1851.877 kb on + strand, within MPMX20_01761at 1851.880 kb on - strand, within MPMX20_01761at 1851.954 kb on + strand, within MPMX20_01761at 1851.954 kb on + strand, within MPMX20_01761at 1851.962 kb on - strand, within MPMX20_01761at 1852.039 kb on - strand, within MPMX20_01761at 1852.111 kb on - strand, within MPMX20_01761at 1852.244 kb on + strand, within MPMX20_01761at 1852.275 kb on + strand, within MPMX20_01761at 1852.302 kb on - strand, within MPMX20_01761at 1852.302 kb on - strand, within MPMX20_01761at 1852.302 kb on - strand, within MPMX20_01761at 1852.335 kb on + strand, within MPMX20_01761at 1852.348 kb on - strand, within MPMX20_01761at 1852.353 kb on + strand, within MPMX20_01761at 1852.388 kb on + strand, within MPMX20_01761at 1852.388 kb on + strand, within MPMX20_01761at 1852.388 kb on + strand, within MPMX20_01761at 1852.388 kb on + strand, within MPMX20_01761at 1852.396 kb on - strand, within MPMX20_01761at 1852.396 kb on - strand, within MPMX20_01761at 1852.396 kb on - strand, within MPMX20_01761at 1852.396 kb on - strand, within MPMX20_01761at 1852.396 kb on - strand, within MPMX20_01761at 1852.396 kb on - strand, within MPMX20_01761at 1852.398 kb on + strand, within MPMX20_01761at 1852.406 kb on - strand, within MPMX20_01761at 1852.406 kb on - strand, within MPMX20_01761at 1852.408 kb on + strand, within MPMX20_01761at 1852.408 kb on + strand, within MPMX20_01761at 1852.408 kb on + strand, within MPMX20_01761at 1852.416 kb on - strand, within MPMX20_01761at 1852.416 kb on - strand, within MPMX20_01761at 1852.416 kb on - strand, within MPMX20_01761at 1852.416 kb on - strand, within MPMX20_01761at 1852.416 kb on - strand, within MPMX20_01761at 1852.416 kb on - strand, within MPMX20_01761at 1852.464 kb on + strand, within MPMX20_01761at 1852.502 kb on + strand, within MPMX20_01761at 1852.502 kb on - strand, within MPMX20_01761at 1852.505 kb on - strand, within MPMX20_01761at 1852.524 kb on + strand, within MPMX20_01761at 1852.524 kb on + strand, within MPMX20_01761at 1852.524 kb on + strand, within MPMX20_01761at 1852.524 kb on + strand, within MPMX20_01761at 1852.524 kb on + strand, within MPMX20_01761at 1852.531 kb on - strand, within MPMX20_01761at 1852.532 kb on - strand, within MPMX20_01761at 1852.532 kb on - strand, within MPMX20_01761at 1852.532 kb on - strand, within MPMX20_01761at 1852.546 kb on - strand, within MPMX20_01761at 1852.546 kb on - strand, within MPMX20_01761at 1852.551 kb on - strand, within MPMX20_01761at 1852.580 kb on + strand, within MPMX20_01761at 1852.602 kb on - strand, within MPMX20_01761at 1852.716 kb on + strand, within MPMX20_01761at 1852.742 kb on + strand, within MPMX20_01761at 1852.750 kb on - strand, within MPMX20_01761at 1852.766 kb on + strand, within MPMX20_01761at 1852.788 kb on + strand, within MPMX20_01761at 1852.788 kb on + strand, within MPMX20_01761at 1852.788 kb on + strand, within MPMX20_01761at 1852.788 kb on + strand, within MPMX20_01761at 1852.788 kb on + strand, within MPMX20_01761at 1852.796 kb on - strand, within MPMX20_01761at 1852.796 kb on - strand, within MPMX20_01761at 1852.796 kb on - strand, within MPMX20_01761at 1852.796 kb on - strand, within MPMX20_01761at 1852.829 kb on - strand, within MPMX20_01761at 1852.904 kb on + strand, within MPMX20_01761at 1852.933 kb on + strand, within MPMX20_01761at 1853.056 kb on + strand, within MPMX20_01761at 1853.156 kb on + strandat 1853.157 kb on + strandat 1853.157 kb on + strandat 1853.165 kb on - strandat 1853.182 kb on - strandat 1853.211 kb on - strandat 1853.211 kb on - strandat 1853.278 kb on - strandat 1853.282 kb on + strandat 1853.284 kb on - strandat 1853.290 kb on - strandat 1853.371 kb on + strandat 1853.553 kb on - strand, within MPMX20_01762at 1853.563 kb on - strand, within MPMX20_01762at 1853.753 kb on - strand, within MPMX20_01762at 1853.753 kb on - strand, within MPMX20_01762at 1853.778 kb on + strand, within MPMX20_01762at 1853.778 kb on + strand, within MPMX20_01762at 1853.786 kb on - strand, within MPMX20_01762at 1853.786 kb on - strand, within MPMX20_01762at 1853.786 kb on - strand, within MPMX20_01762at 1853.815 kb on + strand, within MPMX20_01762at 1853.815 kb on + strand, within MPMX20_01762at 1853.815 kb on + strand, within MPMX20_01762at 1853.815 kb on + strand, within MPMX20_01762at 1853.823 kb on - strand, within MPMX20_01762at 1853.823 kb on - strand, within MPMX20_01762at 1853.849 kb on + strand, within MPMX20_01762at 1853.857 kb on - strand, within MPMX20_01762at 1853.862 kb on - strand, within MPMX20_01762at 1853.867 kb on - strand, within MPMX20_01762at 1853.878 kb on - strand, within MPMX20_01762at 1853.967 kb on - strand, within MPMX20_01762at 1854.075 kb on + strand, within MPMX20_01762at 1854.083 kb on - strand, within MPMX20_01762at 1854.094 kb on - strand, within MPMX20_01762at 1854.096 kb on + strand, within MPMX20_01762at 1854.096 kb on + strand, within MPMX20_01762at 1854.096 kb on + strand, within MPMX20_01762at 1854.114 kb on - strand, within MPMX20_01762at 1854.245 kb on + strandat 1854.252 kb on - strandat 1854.255 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Motility test in 1X LB; 1 day; inner cut; 0.3% agar
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1,850,681 + -0.5
1,850,681 + -1.0
1,850,689 - -1.2
1,850,796 - MPMX20_01760 0.20 -1.1
1,850,796 - MPMX20_01760 0.20 +0.3
1,850,843 + MPMX20_01760 0.25 -0.8
1,850,865 + MPMX20_01760 0.27 +0.2
1,850,904 - MPMX20_01760 0.31 -2.1
1,850,913 + MPMX20_01760 0.32 -2.1
1,850,991 - MPMX20_01760 0.40 +0.1
1,851,014 + MPMX20_01760 0.43 -1.9
1,851,118 - MPMX20_01760 0.54 -1.1
1,851,152 + MPMX20_01760 0.57 -0.3
1,851,163 + MPMX20_01760 0.58 -1.2
1,851,251 - MPMX20_01760 0.68 -0.3
1,851,255 + MPMX20_01760 0.68 -1.5
1,851,301 + MPMX20_01760 0.73 -2.7
1,851,301 + MPMX20_01760 0.73 +0.4
1,851,354 + MPMX20_01760 0.78 -1.3
1,851,359 + MPMX20_01760 0.79 -0.9
1,851,362 - MPMX20_01760 0.79 -1.2
1,851,362 - MPMX20_01760 0.79 -2.7
1,851,400 + MPMX20_01760 0.83 +1.0
1,851,408 + MPMX20_01760 0.84 +1.1
1,851,431 - MPMX20_01760 0.86 -2.1
1,851,517 + -0.5
1,851,640 - -1.4
1,851,667 + -4.3
1,851,667 + -1.5
1,851,667 + -1.5
1,851,667 + -0.8
1,851,667 + -0.8
1,851,667 + -2.0
1,851,667 + -1.2
1,851,672 + -2.6
1,851,672 + -0.0
1,851,672 + -0.5
1,851,675 - -0.7
1,851,675 - +0.1
1,851,680 - -0.8
1,851,680 - -2.6
1,851,680 - -0.9
1,851,680 - -2.5
1,851,731 + -1.1
1,851,877 + MPMX20_01761 0.15 -3.5
1,851,880 - MPMX20_01761 0.15 -2.9
1,851,954 + MPMX20_01761 0.19 -3.4
1,851,954 + MPMX20_01761 0.19 -2.3
1,851,962 - MPMX20_01761 0.20 -0.8
1,852,039 - MPMX20_01761 0.25 -0.9
1,852,111 - MPMX20_01761 0.29 -2.4
1,852,244 + MPMX20_01761 0.37 -3.0
1,852,275 + MPMX20_01761 0.39 -1.2
1,852,302 - MPMX20_01761 0.41 -1.8
1,852,302 - MPMX20_01761 0.41 -1.4
1,852,302 - MPMX20_01761 0.41 -0.9
1,852,335 + MPMX20_01761 0.43 -1.8
1,852,348 - MPMX20_01761 0.43 -0.1
1,852,353 + MPMX20_01761 0.44 -1.5
1,852,388 + MPMX20_01761 0.46 -1.4
1,852,388 + MPMX20_01761 0.46 -2.4
1,852,388 + MPMX20_01761 0.46 -0.9
1,852,388 + MPMX20_01761 0.46 -2.3
1,852,396 - MPMX20_01761 0.46 -3.0
1,852,396 - MPMX20_01761 0.46 -2.0
1,852,396 - MPMX20_01761 0.46 -0.7
1,852,396 - MPMX20_01761 0.46 -0.2
1,852,396 - MPMX20_01761 0.46 -3.0
1,852,396 - MPMX20_01761 0.46 -2.6
1,852,398 + MPMX20_01761 0.46 -1.2
1,852,406 - MPMX20_01761 0.47 -2.0
1,852,406 - MPMX20_01761 0.47 -1.2
1,852,408 + MPMX20_01761 0.47 -2.3
1,852,408 + MPMX20_01761 0.47 -2.1
1,852,408 + MPMX20_01761 0.47 -1.1
1,852,416 - MPMX20_01761 0.48 -0.8
1,852,416 - MPMX20_01761 0.48 -2.6
1,852,416 - MPMX20_01761 0.48 -1.3
1,852,416 - MPMX20_01761 0.48 -3.5
1,852,416 - MPMX20_01761 0.48 -2.7
1,852,416 - MPMX20_01761 0.48 -0.3
1,852,464 + MPMX20_01761 0.51 +1.1
1,852,502 + MPMX20_01761 0.53 -1.7
1,852,502 - MPMX20_01761 0.53 -2.8
1,852,505 - MPMX20_01761 0.53 -1.9
1,852,524 + MPMX20_01761 0.54 -0.6
1,852,524 + MPMX20_01761 0.54 -1.9
1,852,524 + MPMX20_01761 0.54 -0.2
1,852,524 + MPMX20_01761 0.54 -2.1
1,852,524 + MPMX20_01761 0.54 -1.9
1,852,531 - MPMX20_01761 0.55 -2.4
1,852,532 - MPMX20_01761 0.55 -2.1
1,852,532 - MPMX20_01761 0.55 -3.3
1,852,532 - MPMX20_01761 0.55 -2.0
1,852,546 - MPMX20_01761 0.56 -1.1
1,852,546 - MPMX20_01761 0.56 -2.9
1,852,551 - MPMX20_01761 0.56 -3.5
1,852,580 + MPMX20_01761 0.58 -1.6
1,852,602 - MPMX20_01761 0.59 -0.5
1,852,716 + MPMX20_01761 0.66 -2.1
1,852,742 + MPMX20_01761 0.67 -1.1
1,852,750 - MPMX20_01761 0.68 -0.8
1,852,766 + MPMX20_01761 0.69 -1.2
1,852,788 + MPMX20_01761 0.70 -3.0
1,852,788 + MPMX20_01761 0.70 -1.5
1,852,788 + MPMX20_01761 0.70 -0.9
1,852,788 + MPMX20_01761 0.70 +0.1
1,852,788 + MPMX20_01761 0.70 -3.2
1,852,796 - MPMX20_01761 0.71 -0.6
1,852,796 - MPMX20_01761 0.71 -1.5
1,852,796 - MPMX20_01761 0.71 +0.1
1,852,796 - MPMX20_01761 0.71 -2.1
1,852,829 - MPMX20_01761 0.73 -4.3
1,852,904 + MPMX20_01761 0.77 -0.5
1,852,933 + MPMX20_01761 0.79 -1.3
1,853,056 + MPMX20_01761 0.87 -0.9
1,853,156 + -2.8
1,853,157 + -0.2
1,853,157 + -2.6
1,853,165 - -1.2
1,853,182 - -2.6
1,853,211 - -2.2
1,853,211 - -1.8
1,853,278 - -0.7
1,853,282 + +3.3
1,853,284 - -1.8
1,853,290 - -3.3
1,853,371 + -1.2
1,853,553 - MPMX20_01762 0.28 -0.8
1,853,563 - MPMX20_01762 0.29 -0.6
1,853,753 - MPMX20_01762 0.49 -2.2
1,853,753 - MPMX20_01762 0.49 -1.9
1,853,778 + MPMX20_01762 0.51 -3.6
1,853,778 + MPMX20_01762 0.51 -1.7
1,853,786 - MPMX20_01762 0.52 +0.3
1,853,786 - MPMX20_01762 0.52 -0.6
1,853,786 - MPMX20_01762 0.52 -2.8
1,853,815 + MPMX20_01762 0.55 -1.5
1,853,815 + MPMX20_01762 0.55 -0.6
1,853,815 + MPMX20_01762 0.55 -1.7
1,853,815 + MPMX20_01762 0.55 -1.7
1,853,823 - MPMX20_01762 0.56 -2.2
1,853,823 - MPMX20_01762 0.56 -2.1
1,853,849 + MPMX20_01762 0.59 -1.1
1,853,857 - MPMX20_01762 0.59 -1.2
1,853,862 - MPMX20_01762 0.60 -1.1
1,853,867 - MPMX20_01762 0.60 -1.6
1,853,878 - MPMX20_01762 0.62 -0.3
1,853,967 - MPMX20_01762 0.71 -1.6
1,854,075 + MPMX20_01762 0.82 -0.7
1,854,083 - MPMX20_01762 0.83 -1.4
1,854,094 - MPMX20_01762 0.84 -1.5
1,854,096 + MPMX20_01762 0.84 -0.8
1,854,096 + MPMX20_01762 0.84 -2.5
1,854,096 + MPMX20_01762 0.84 -1.8
1,854,114 - MPMX20_01762 0.86 -2.3
1,854,245 + +0.1
1,854,252 - +1.1
1,854,255 + -0.1

Or see this region's nucleotide sequence